RNA–Protein interactions for RNA: ENST00000508472.5

DDR1-264, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 836 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-264ENST00000508472 CHGAP10645 457 aaKnown RBP23.6■■□□□ 1.37
DDR1-264ENST00000508472 RIMS2Q9UQ26 1411 aa23.58■■□□□ 1.36
DDR1-264ENST00000508472 KCNA6P17658 529 aa23.57■■□□□ 1.36
DDR1-264ENST00000508472 SLC26A8Q96RN1 970 aa23.57■■□□□ 1.36
DDR1-264ENST00000508472 PLEKHG1Q9ULL1 1385 aa23.56■■□□□ 1.36
DDR1-264ENST00000508472 ZFYVE9O95405 1425 aa23.56■■□□□ 1.36
DDR1-264ENST00000508472 SPHKAPQ2M3C7 1700 aa23.53■■□□□ 1.36
DDR1-264ENST00000508472 NAIPQ13075 1403 aa23.53■■□□□ 1.36
DDR1-264ENST00000508472 NKTRP30414 1462 aaKnown RBP23.52■■□□□ 1.36
DDR1-264ENST00000508472 HSPA1LP34931 641 aa23.52■■□□□ 1.36
DDR1-264ENST00000508472 PROSER2Q86WR7 435 aaPredicted RBP23.5■■□□□ 1.35
DDR1-264ENST00000508472 XIRP1Q702N8 1843 aaKnown RBP23.49■■□□□ 1.35
DDR1-264ENST00000508472 NWD1Q149M9 1564 aa23.49■■□□□ 1.35
DDR1-264ENST00000508472 HFM1A2PYH4 1435 aa23.49■■□□□ 1.35
DDR1-264ENST00000508472 ALKQ9UM73 1620 aa23.48■■□□□ 1.35
DDR1-264ENST00000508472 TBX22Q9Y458 520 aa23.48■■□□□ 1.35
DDR1-264ENST00000508472 TMEM94Q12767 1356 aa23.48■■□□□ 1.35
DDR1-264ENST00000508472 DIP2AQ14689 1571 aa23.48■■□□□ 1.35
DDR1-264ENST00000508472 TRIM52Q96A61 297 aa23.46■■□□□ 1.35
DDR1-264ENST00000508472 CHD2O14647 1828 aaKnown RBP23.45■■□□□ 1.34
DDR1-264ENST00000508472 ZNF326Q5BKZ1 582 aaKnown RBP23.43■■□□□ 1.34
DDR1-264ENST00000508472 MSH6P52701 1360 aa23.42■■□□□ 1.34
DDR1-264ENST00000508472 PIK3R4Q99570 1358 aa23.42■■□□□ 1.34
DDR1-264ENST00000508472 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
DDR1-264ENST00000508472 TRPM2O94759 1503 aa23.42■■□□□ 1.34
DDR1-264ENST00000508472 KIF1BO60333 1816 aa23.4■■□□□ 1.34
DDR1-264ENST00000508472 NUTM2DQ5VT03 806 aaPredicted RBP23.4■■□□□ 1.34
DDR1-264ENST00000508472 ACIN1Q9UKV3 1341 aaKnown RBP23.38■■□□□ 1.33
DDR1-264ENST00000508472 SLC4A1APQ9BWU0 796 aaKnown RBP23.38■■□□□ 1.33
DDR1-264ENST00000508472 FAM135BQ49AJ0 1406 aa23.38■■□□□ 1.33
DDR1-264ENST00000508472 NCOA3Q9Y6Q9 1424 aa23.38■■□□□ 1.33
DDR1-264ENST00000508472 ADAMTS13Q76LX8 1427 aa23.37■■□□□ 1.33
DDR1-264ENST00000508472 CLTCL1P53675 1640 aa23.37■■□□□ 1.33
DDR1-264ENST00000508472 C14orf37Q86TY3 774 aa23.35■■□□□ 1.33
DDR1-264ENST00000508472 MED1Q15648 1581 aaPredicted RBP23.34■■□□□ 1.33
DDR1-264ENST00000508472 SETBP1Q9Y6X0 1596 aa23.33■■□□□ 1.33
DDR1-264ENST00000508472 RBM33Q96EV2 1170 aaKnown RBP23.33■■□□□ 1.33
DDR1-264ENST00000508472 ILDR2Q71H61 639 aa23.31■■□□□ 1.32
DDR1-264ENST00000508472 ROBO1Q9Y6N7 1651 aa23.3■■□□□ 1.32
DDR1-264ENST00000508472 PHF23Q9BUL5 403 aaPredicted RBP23.29■■□□□ 1.32
DDR1-264ENST00000508472 SLAIN2Q9P270 581 aa23.29■■□□□ 1.32
DDR1-264ENST00000508472 AMOTL2Q9Y2J4 779 aa23.29■■□□□ 1.32
DDR1-264ENST00000508472 NEXMIFQ5QGS0 1516 aa23.28■■□□□ 1.32
DDR1-264ENST00000508472 VGFO15240 615 aaPredicted RBP23.28■■□□□ 1.32
DDR1-264ENST00000508472 ATF3P18847 181 aa23.27■■□□□ 1.32
DDR1-264ENST00000508472 CADPS2Q86UW7 1296 aa23.27■■□□□ 1.32
DDR1-264ENST00000508472 C19orf44Q9H6X5 657 aa23.27■■□□□ 1.32
DDR1-264ENST00000508472 RPGRIP1LQ68CZ1 1315 aa23.27■■□□□ 1.32
DDR1-264ENST00000508472 NRXN3Q9Y4C0 1643 aa23.26■■□□□ 1.31
DDR1-264ENST00000508472 SOCS7O14512 581 aa23.25■■□□□ 1.31
DDR1-264ENST00000508472 XRN1Q8IZH2 1706 aaKnown RBP23.22■■□□□ 1.31
DDR1-264ENST00000508472 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.22■■□□□ 1.31
DDR1-264ENST00000508472 CCDC144AA2RUR9 1427 aa23.21■■□□□ 1.31
DDR1-264ENST00000508472 PTPRUQ92729 1446 aa23.21■■□□□ 1.31
DDR1-264ENST00000508472 MPHOSPH9Q99550 1183 aa23.2■■□□□ 1.3
DDR1-264ENST00000508472 PHLPP1O60346 1717 aa23.19■■□□□ 1.3
DDR1-264ENST00000508472 DCCP43146 1447 aa23.19■■□□□ 1.3
DDR1-264ENST00000508472 METP08581 1390 aa23.18■■□□□ 1.3
DDR1-264ENST00000508472 SETD5Q9C0A6 1442 aa23.17■■□□□ 1.3
DDR1-264ENST00000508472 PPLO60437 1756 aa23.17■■□□□ 1.3
DDR1-264ENST00000508472 FOXD1Q16676 465 aa23.14■■□□□ 1.29
DDR1-264ENST00000508472 JCADQ9P266 1359 aa23.13■■□□□ 1.29
DDR1-264ENST00000508472 ANKRD30BQ9BXX2 1392 aa23.1■■□□□ 1.29
DDR1-264ENST00000508472 PTCH1Q13635 1447 aa23.09■■□□□ 1.29
DDR1-264ENST00000508472 ADGRL3Q9HAR2 1447 aa23.09■■□□□ 1.29
DDR1-264ENST00000508472 SETD1AO15047 1707 aaKnown RBP23.09■■□□□ 1.29
DDR1-264ENST00000508472 AHDC1Q5TGY3 1603 aaPredicted RBP23.08■■□□□ 1.29
DDR1-264ENST00000508472 RGL3Q3MIN7 710 aa23.08■■□□□ 1.29
DDR1-264ENST00000508472 COL16A1Q07092 1604 aaPredicted RBP23.07■■□□□ 1.28
DDR1-264ENST00000508472 SPATA31E1Q6ZUB1 1445 aa23.06■■□□□ 1.28
DDR1-264ENST00000508472 RAB3GAP2Q9H2M9 1393 aa23.05■■□□□ 1.28
DDR1-264ENST00000508472 BRINP3Q76B58 766 aa23.05■■□□□ 1.28
DDR1-264ENST00000508472 PRAG1Q86YV5 1406 aa23.05■■□□□ 1.28
DDR1-264ENST00000508472 NALCNQ8IZF0 1738 aa23.05■■□□□ 1.28
DDR1-264ENST00000508472 IFT172Q9UG01 1749 aa23.04■■□□□ 1.28
DDR1-264ENST00000508472 SPATA31A6Q5VVP1 1343 aa23.04■■□□□ 1.28
DDR1-264ENST00000508472 MST1RQ04912 1400 aa23.03■■□□□ 1.28
DDR1-264ENST00000508472 ASXL1Q8IXJ9 1541 aa23.02■■□□□ 1.28
DDR1-264ENST00000508472 ADGRF5Q8IZF2 1346 aa23■■□□□ 1.27
DDR1-264ENST00000508472 ROBO2Q9HCK4 1378 aa23■■□□□ 1.27
DDR1-264ENST00000508472 SHPRHQ149N8 1683 aa23■■□□□ 1.27
DDR1-264ENST00000508472 HRCP23327 699 aa22.98■■□□□ 1.27
DDR1-264ENST00000508472 NHSL1Q5SYE7 1610 aa22.97■■□□□ 1.27
DDR1-264ENST00000508472 MEX3CQ5U5Q3 659 aaKnown RBP22.97■■□□□ 1.27
DDR1-264ENST00000508472 LRRC59Q96AG4 307 aaKnown RBP22.96■■□□□ 1.27
DDR1-264ENST00000508472 PIK3C2GO75747 1445 aa22.96■■□□□ 1.27
DDR1-264ENST00000508472 RGS17Q9UGC6 210 aaPredicted RBP22.95■■□□□ 1.26
DDR1-264ENST00000508472 C1orf167Q5SNV9 1468 aa22.93■■□□□ 1.26
DDR1-264ENST00000508472 LRPPRCP42704 1394 aaKnown RBP22.93■■□□□ 1.26
DDR1-264ENST00000508472 LAMC1P11047 1609 aa22.93■■□□□ 1.26
DDR1-264ENST00000508472 TECPR2O15040 1411 aa22.92■■□□□ 1.26
DDR1-264ENST00000508472 STK26Q9P289 416 aa22.92■■□□□ 1.26
DDR1-264ENST00000508472 MYOM2P54296 1465 aa22.92■■□□□ 1.26
DDR1-264ENST00000508472 KNDC1Q76NI1 1749 aa22.91■■□□□ 1.26
DDR1-264ENST00000508472 ABCC11Q96J66 1382 aa22.91■■□□□ 1.26
DDR1-264ENST00000508472 CDC42BPGQ6DT37 1551 aa22.9■■□□□ 1.26
DDR1-264ENST00000508472 ZNF772Q68DY9 489 aaPredicted RBP22.88■■□□□ 1.25
DDR1-264ENST00000508472 C14orf93Q9H972 538 aaKnown RBP22.88■■□□□ 1.25
DDR1-264ENST00000508472 DHX57Q6P158 1386 aaKnown RBP22.88■■□□□ 1.25
DDR1-264ENST00000508472 TMEM132EQ6IEE7 984 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms