RNA–Protein interactions for RNA: ENST00000508438.1

SH3TC1-215, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 515 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-215ENST00000508438 SOCS7O14512 581 aa19.84■□□□□ 0.77
SH3TC1-215ENST00000508438 ITGAEP38570 1179 aa19.83■□□□□ 0.77
SH3TC1-215ENST00000508438 KCNA6P17658 529 aa19.82■□□□□ 0.76
SH3TC1-215ENST00000508438 NWD1Q149M9 1564 aa19.82■□□□□ 0.76
SH3TC1-215ENST00000508438 RIMS2Q9UQ26 1411 aa19.81■□□□□ 0.76
SH3TC1-215ENST00000508438 NUP155O75694 1391 aa19.8■□□□□ 0.76
SH3TC1-215ENST00000508438 TMEM94Q12767 1356 aa19.8■□□□□ 0.76
SH3TC1-215ENST00000508438 PLEKHG1Q9ULL1 1385 aa19.79■□□□□ 0.76
SH3TC1-215ENST00000508438 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
SH3TC1-215ENST00000508438 CHD2O14647 1828 aaKnown RBP19.77■□□□□ 0.76
SH3TC1-215ENST00000508438 BCANQ96GW7 911 aa19.77■□□□□ 0.76
SH3TC1-215ENST00000508438 NKTRP30414 1462 aaKnown RBP19.77■□□□□ 0.76
SH3TC1-215ENST00000508438 PROSER2Q86WR7 435 aaPredicted RBP19.76■□□□□ 0.75
SH3TC1-215ENST00000508438 CHGAP10645 457 aaKnown RBP19.75■□□□□ 0.75
SH3TC1-215ENST00000508438 HDGFP51858 240 aaKnown RBP19.75■□□□□ 0.75
SH3TC1-215ENST00000508438 RBM33Q96EV2 1170 aaKnown RBP19.75■□□□□ 0.75
SH3TC1-215ENST00000508438 PPP1R15AO75807 674 aaPredicted RBP19.74■□□□□ 0.75
SH3TC1-215ENST00000508438 RRBP1Q9P2E9 1410 aaKnown RBP19.74■□□□□ 0.75
SH3TC1-215ENST00000508438 FAM135BQ49AJ0 1406 aa19.73■□□□□ 0.75
SH3TC1-215ENST00000508438 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.72■□□□□ 0.75
SH3TC1-215ENST00000508438 SPHKAPQ2M3C7 1700 aa19.71■□□□□ 0.75
SH3TC1-215ENST00000508438 NUTM2DQ5VT03 806 aaPredicted RBP19.71■□□□□ 0.75
SH3TC1-215ENST00000508438 ADAMTS13Q76LX8 1427 aa19.7■□□□□ 0.74
SH3TC1-215ENST00000508438 TBX22Q9Y458 520 aa19.7■□□□□ 0.74
SH3TC1-215ENST00000508438 ROBO1Q9Y6N7 1651 aa19.7■□□□□ 0.74
SH3TC1-215ENST00000508438 DIP2AQ14689 1571 aa19.68■□□□□ 0.74
SH3TC1-215ENST00000508438 MSH6P52701 1360 aa19.67■□□□□ 0.74
SH3TC1-215ENST00000508438 NAIPQ13075 1403 aa19.67■□□□□ 0.74
SH3TC1-215ENST00000508438 PHF23Q9BUL5 403 aaPredicted RBP19.65■□□□□ 0.74
SH3TC1-215ENST00000508438 NRXN3Q9Y4C0 1643 aa19.63■□□□□ 0.73
SH3TC1-215ENST00000508438 PIK3R4Q99570 1358 aa19.63■□□□□ 0.73
SH3TC1-215ENST00000508438 TRPM2O94759 1503 aa19.62■□□□□ 0.73
SH3TC1-215ENST00000508438 NCOA3Q9Y6Q9 1424 aa19.62■□□□□ 0.73
SH3TC1-215ENST00000508438 CLTCL1P53675 1640 aa19.62■□□□□ 0.73
SH3TC1-215ENST00000508438 SLAIN2Q9P270 581 aa19.61■□□□□ 0.73
SH3TC1-215ENST00000508438 PTPRUQ92729 1446 aa19.6■□□□□ 0.73
SH3TC1-215ENST00000508438 SETBP1Q9Y6X0 1596 aa19.6■□□□□ 0.73
SH3TC1-215ENST00000508438 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.59■□□□□ 0.73
SH3TC1-215ENST00000508438 PHLPP1O60346 1717 aa19.58■□□□□ 0.72
SH3TC1-215ENST00000508438 HFM1A2PYH4 1435 aa19.58■□□□□ 0.72
SH3TC1-215ENST00000508438 KIF1BO60333 1816 aa19.58■□□□□ 0.72
SH3TC1-215ENST00000508438 ZNF326Q5BKZ1 582 aaKnown RBP19.57■□□□□ 0.72
SH3TC1-215ENST00000508438 XRN1Q8IZH2 1706 aaKnown RBP19.56■□□□□ 0.72
SH3TC1-215ENST00000508438 NEXMIFQ5QGS0 1516 aa19.56■□□□□ 0.72
SH3TC1-215ENST00000508438 RGS17Q9UGC6 210 aaPredicted RBP19.56■□□□□ 0.72
SH3TC1-215ENST00000508438 AMOTL2Q9Y2J4 779 aa19.56■□□□□ 0.72
SH3TC1-215ENST00000508438 C14orf37Q86TY3 774 aa19.55■□□□□ 0.72
SH3TC1-215ENST00000508438 C19orf44Q9H6X5 657 aa19.54■□□□□ 0.72
SH3TC1-215ENST00000508438 COL16A1Q07092 1604 aaPredicted RBP19.52■□□□□ 0.72
SH3TC1-215ENST00000508438 CADPS2Q86UW7 1296 aa19.52■□□□□ 0.72
SH3TC1-215ENST00000508438 TRIM52Q96A61 297 aa19.52■□□□□ 0.72
SH3TC1-215ENST00000508438 METP08581 1390 aa19.52■□□□□ 0.72
SH3TC1-215ENST00000508438 ATF3P18847 181 aa19.5■□□□□ 0.71
SH3TC1-215ENST00000508438 AHDC1Q5TGY3 1603 aaPredicted RBP19.48■□□□□ 0.71
SH3TC1-215ENST00000508438 JCADQ9P266 1359 aa19.48■□□□□ 0.71
SH3TC1-215ENST00000508438 SLC4A1APQ9BWU0 796 aaKnown RBP19.47■□□□□ 0.71
SH3TC1-215ENST00000508438 DCCP43146 1447 aa19.47■□□□□ 0.71
SH3TC1-215ENST00000508438 SETD1AO15047 1707 aaKnown RBP19.46■□□□□ 0.71
SH3TC1-215ENST00000508438 POTEAQ6S8J7 498 aa19.44■□□□□ 0.7
SH3TC1-215ENST00000508438 BRINP3Q76B58 766 aa19.44■□□□□ 0.7
SH3TC1-215ENST00000508438 PPLO60437 1756 aa19.44■□□□□ 0.7
SH3TC1-215ENST00000508438 NALCNQ8IZF0 1738 aa19.43■□□□□ 0.7
SH3TC1-215ENST00000508438 MST1RQ04912 1400 aa19.42■□□□□ 0.7
SH3TC1-215ENST00000508438 SHPRHQ149N8 1683 aa19.42■□□□□ 0.7
SH3TC1-215ENST00000508438 ADGRL3Q9HAR2 1447 aa19.42■□□□□ 0.7
SH3TC1-215ENST00000508438 VGFO15240 615 aaPredicted RBP19.41■□□□□ 0.7
SH3TC1-215ENST00000508438 FOXD1Q16676 465 aa19.41■□□□□ 0.7
SH3TC1-215ENST00000508438 RPGRIP1LQ68CZ1 1315 aa19.41■□□□□ 0.7
SH3TC1-215ENST00000508438 ASXL1Q8IXJ9 1541 aa19.41■□□□□ 0.7
SH3TC1-215ENST00000508438 LRP6O75581 1613 aa19.4■□□□□ 0.7
SH3TC1-215ENST00000508438 NHSL1Q5SYE7 1610 aa19.39■□□□□ 0.69
SH3TC1-215ENST00000508438 SPATA31A6Q5VVP1 1343 aa19.38■□□□□ 0.69
SH3TC1-215ENST00000508438 PTCH1Q13635 1447 aa19.37■□□□□ 0.69
SH3TC1-215ENST00000508438 PRAG1Q86YV5 1406 aa19.36■□□□□ 0.69
SH3TC1-215ENST00000508438 ROBO2Q9HCK4 1378 aa19.36■□□□□ 0.69
SH3TC1-215ENST00000508438 CCDC144AA2RUR9 1427 aa19.34■□□□□ 0.69
SH3TC1-215ENST00000508438 MPHOSPH9Q99550 1183 aa19.34■□□□□ 0.69
SH3TC1-215ENST00000508438 IFT172Q9UG01 1749 aa19.34■□□□□ 0.69
SH3TC1-215ENST00000508438 SETD5Q9C0A6 1442 aa19.34■□□□□ 0.69
SH3TC1-215ENST00000508438 SPATA31E1Q6ZUB1 1445 aa19.33■□□□□ 0.68
SH3TC1-215ENST00000508438 C1orf167Q5SNV9 1468 aa19.32■□□□□ 0.68
SH3TC1-215ENST00000508438 ADGRF5Q8IZF2 1346 aa19.3■□□□□ 0.68
SH3TC1-215ENST00000508438 MEX3CQ5U5Q3 659 aaKnown RBP19.3■□□□□ 0.68
SH3TC1-215ENST00000508438 DDX17Q92841 729 aaKnown RBP19.3■□□□□ 0.68
SH3TC1-215ENST00000508438 RGL3Q3MIN7 710 aa19.29■□□□□ 0.68
SH3TC1-215ENST00000508438 LAMC1P11047 1609 aa19.29■□□□□ 0.68
SH3TC1-215ENST00000508438 NUTM2BA6NNL0 878 aaPredicted RBP19.27■□□□□ 0.68
SH3TC1-215ENST00000508438 NUTM2EB1AL46 878 aaPredicted RBP19.27■□□□□ 0.68
SH3TC1-215ENST00000508438 NUTM2AQ8IVF1 878 aaPredicted RBP19.27■□□□□ 0.68
SH3TC1-215ENST00000508438 LRRC59Q96AG4 307 aaKnown RBP19.27■□□□□ 0.68
SH3TC1-215ENST00000508438 ANKRD30BQ9BXX2 1392 aa19.26■□□□□ 0.67
SH3TC1-215ENST00000508438 PNPLA6Q8IY17 1366 aa19.25■□□□□ 0.67
SH3TC1-215ENST00000508438 ZNF772Q68DY9 489 aaPredicted RBP19.25■□□□□ 0.67
SH3TC1-215ENST00000508438 ORAI2Q96SN7 254 aa19.25■□□□□ 0.67
SH3TC1-215ENST00000508438 CDC42BPGQ6DT37 1551 aa19.23■□□□□ 0.67
SH3TC1-215ENST00000508438 TECPR2O15040 1411 aa19.23■□□□□ 0.67
SH3TC1-215ENST00000508438 PIK3C2GO75747 1445 aa19.23■□□□□ 0.67
SH3TC1-215ENST00000508438 ACIN1Q9UKV3 1341 aaKnown RBP19.23■□□□□ 0.67
SH3TC1-215ENST00000508438 KNDC1Q76NI1 1749 aa19.22■□□□□ 0.67
SH3TC1-215ENST00000508438 LRPPRCP42704 1394 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms