RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 TXNDC2Q86VQ3 553 aa18.41■□□□□ 0.54
PTPN20-218ENST00000508357 NRXN3Q9Y4C0 1643 aa18.39■□□□□ 0.53
PTPN20-218ENST00000508357 CHGAP10645 457 aaKnown RBP18.39■□□□□ 0.53
PTPN20-218ENST00000508357 HRCP23327 699 aa18.38■□□□□ 0.53
PTPN20-218ENST00000508357 PLEKHG1Q9ULL1 1385 aa18.38■□□□□ 0.53
PTPN20-218ENST00000508357 EID1Q9Y6B2 187 aa18.37■□□□□ 0.53
PTPN20-218ENST00000508357 CCDC144AA2RUR9 1427 aa18.36■□□□□ 0.53
PTPN20-218ENST00000508357 SPATA31E1Q6ZUB1 1445 aa18.36■□□□□ 0.53
PTPN20-218ENST00000508357 ACIN1Q9UKV3 1341 aaKnown RBP18.36■□□□□ 0.53
PTPN20-218ENST00000508357 ADAMTS13Q76LX8 1427 aa18.35■□□□□ 0.53
PTPN20-218ENST00000508357 PPLO60437 1756 aa18.35■□□□□ 0.53
PTPN20-218ENST00000508357 IFT172Q9UG01 1749 aa18.35■□□□□ 0.53
PTPN20-218ENST00000508357 NWD1Q149M9 1564 aa18.34■□□□□ 0.53
PTPN20-218ENST00000508357 NUTM2DQ5VT03 806 aaPredicted RBP18.34■□□□□ 0.53
PTPN20-218ENST00000508357 CERKQ8TCT0 537 aa18.34■□□□□ 0.53
PTPN20-218ENST00000508357 SETBP1Q9Y6X0 1596 aa18.34■□□□□ 0.53
PTPN20-218ENST00000508357 CPS1P31327 1500 aa18.33■□□□□ 0.53
PTPN20-218ENST00000508357 ANKRD30BQ9BXX2 1392 aa18.33■□□□□ 0.53
PTPN20-218ENST00000508357 DIP2AQ14689 1571 aa18.32■□□□□ 0.52
PTPN20-218ENST00000508357 IQSEC2Q5JU85 1478 aa18.31■□□□□ 0.52
PTPN20-218ENST00000508357 SETD1AO15047 1707 aaKnown RBP18.3■□□□□ 0.52
PTPN20-218ENST00000508357 SLC26A8Q96RN1 970 aa18.3■□□□□ 0.52
PTPN20-218ENST00000508357 PPP1R15AO75807 674 aaPredicted RBP18.29■□□□□ 0.52
PTPN20-218ENST00000508357 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.29■□□□□ 0.52
PTPN20-218ENST00000508357 LRRC7Q96NW7 1537 aa18.28■□□□□ 0.52
PTPN20-218ENST00000508357 TRIM26Q12899 539 aaPredicted RBP18.28■□□□□ 0.52
PTPN20-218ENST00000508357 ZNF326Q5BKZ1 582 aaKnown RBP18.28■□□□□ 0.52
PTPN20-218ENST00000508357 XIRP1Q702N8 1843 aaKnown RBP18.28■□□□□ 0.52
PTPN20-218ENST00000508357 CHD2O14647 1828 aaKnown RBP18.26■□□□□ 0.51
PTPN20-218ENST00000508357 ALKQ9UM73 1620 aa18.25■□□□□ 0.51
PTPN20-218ENST00000508357 PTPRUQ92729 1446 aa18.24■□□□□ 0.51
PTPN20-218ENST00000508357 XRN1Q8IZH2 1706 aaKnown RBP18.24■□□□□ 0.51
PTPN20-218ENST00000508357 NKTRP30414 1462 aaKnown RBP18.24■□□□□ 0.51
PTPN20-218ENST00000508357 HDGFP51858 240 aaKnown RBP18.22■□□□□ 0.51
PTPN20-218ENST00000508357 RPGRIP1LQ68CZ1 1315 aa18.22■□□□□ 0.51
PTPN20-218ENST00000508357 ILDR1Q86SU0 546 aaPredicted RBP18.21■□□□□ 0.51
PTPN20-218ENST00000508357 FBXO41Q8TF61 875 aa18.21■□□□□ 0.51
PTPN20-218ENST00000508357 TBX22Q9Y458 520 aa18.21■□□□□ 0.51
PTPN20-218ENST00000508357 ASXL1Q8IXJ9 1541 aa18.21■□□□□ 0.51
PTPN20-218ENST00000508357 NRXN1Q9ULB1 1477 aa18.2■□□□□ 0.5
PTPN20-218ENST00000508357 METP08581 1390 aa18.2■□□□□ 0.5
PTPN20-218ENST00000508357 DHX57Q6P158 1386 aaKnown RBP18.2■□□□□ 0.5
PTPN20-218ENST00000508357 BCANQ96GW7 911 aa18.2■□□□□ 0.5
PTPN20-218ENST00000508357 ADGRF5Q8IZF2 1346 aa18.2■□□□□ 0.5
PTPN20-218ENST00000508357 MYOM2P54296 1465 aa18.2■□□□□ 0.5
PTPN20-218ENST00000508357 PIK3C2GO75747 1445 aa18.19■□□□□ 0.5
PTPN20-218ENST00000508357 KCNA6P17658 529 aa18.19■□□□□ 0.5
PTPN20-218ENST00000508357 RGL3Q3MIN7 710 aa18.19■□□□□ 0.5
PTPN20-218ENST00000508357 PIK3R4Q99570 1358 aa18.18■□□□□ 0.5
PTPN20-218ENST00000508357 TMEM94Q12767 1356 aa18.16■□□□□ 0.5
PTPN20-218ENST00000508357 VGFO15240 615 aaPredicted RBP18.14■□□□□ 0.49
PTPN20-218ENST00000508357 PRAG1Q86YV5 1406 aa18.14■□□□□ 0.49
PTPN20-218ENST00000508357 RBM33Q96EV2 1170 aaKnown RBP18.13■□□□□ 0.49
PTPN20-218ENST00000508357 LAMC1P11047 1609 aa18.11■□□□□ 0.49
PTPN20-218ENST00000508357 PTCH1Q13635 1447 aa18.09■□□□□ 0.49
PTPN20-218ENST00000508357 AMOTL2Q9Y2J4 779 aa18.09■□□□□ 0.49
PTPN20-218ENST00000508357 KNDC1Q76NI1 1749 aa18.09■□□□□ 0.49
PTPN20-218ENST00000508357 UBAP1LF5GYI3 381 aa18.08■□□□□ 0.48
PTPN20-218ENST00000508357 PROSER2Q86WR7 435 aaPredicted RBP18.08■□□□□ 0.48
PTPN20-218ENST00000508357 NALCNQ8IZF0 1738 aa18.08■□□□□ 0.48
PTPN20-218ENST00000508357 ADRA2BP18089 450 aa18.07■□□□□ 0.48
PTPN20-218ENST00000508357 ADGRB1O14514 1584 aa18.07■□□□□ 0.48
PTPN20-218ENST00000508357 ROBO2Q9HCK4 1378 aa18.06■□□□□ 0.48
PTPN20-218ENST00000508357 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.06■□□□□ 0.48
PTPN20-218ENST00000508357 SIN3AQ96ST3 1273 aa18.05■□□□□ 0.48
PTPN20-218ENST00000508357 TECPR2O15040 1411 aa18.05■□□□□ 0.48
PTPN20-218ENST00000508357 NCOA3Q9Y6Q9 1424 aa18.05■□□□□ 0.48
PTPN20-218ENST00000508357 PCGF6Q9BYE7 350 aa18.03■□□□□ 0.48
PTPN20-218ENST00000508357 LRPPRCP42704 1394 aaKnown RBP18.03■□□□□ 0.48
PTPN20-218ENST00000508357 CFAP70Q5T0N1 1121 aa18.02■□□□□ 0.48
PTPN20-218ENST00000508357 PIAS4Q8N2W9 510 aaPredicted RBP18.02■□□□□ 0.48
PTPN20-218ENST00000508357 DCAF11Q8TEB1 546 aa18.02■□□□□ 0.48
PTPN20-218ENST00000508357 C14orf93Q9H972 538 aaKnown RBP18.02■□□□□ 0.48
PTPN20-218ENST00000508357 ADGRL3Q9HAR2 1447 aa18.02■□□□□ 0.48
PTPN20-218ENST00000508357 YTHDC2Q9H6S0 1430 aaKnown RBP18.01■□□□□ 0.47
PTPN20-218ENST00000508357 TMEM132EQ6IEE7 984 aa18.01■□□□□ 0.47
PTPN20-218ENST00000508357 MSH6P52701 1360 aa18.01■□□□□ 0.47
PTPN20-218ENST00000508357 KDM2AQ9Y2K7 1162 aa18■□□□□ 0.47
PTPN20-218ENST00000508357 PIP4K2BP78356 416 aa17.99■□□□□ 0.47
PTPN20-218ENST00000508357 DCCP43146 1447 aa17.98■□□□□ 0.47
PTPN20-218ENST00000508357 KIAA1210Q9ULL0 1709 aa17.98■□□□□ 0.47
PTPN20-218ENST00000508357 TOM1O60784 492 aa17.98■□□□□ 0.47
PTPN20-218ENST00000508357 ABCC11Q96J66 1382 aa17.98■□□□□ 0.47
PTPN20-218ENST00000508357 PLEKHH1Q9ULM0 1364 aa17.98■□□□□ 0.47
PTPN20-218ENST00000508357 ROBO1Q9Y6N7 1651 aa17.98■□□□□ 0.47
PTPN20-218ENST00000508357 DLC1Q96QB1 1528 aa17.97■□□□□ 0.47
PTPN20-218ENST00000508357 L3MBTL2Q969R5 705 aa17.96■□□□□ 0.47
PTPN20-218ENST00000508357 CDC42BPGQ6DT37 1551 aa17.96■□□□□ 0.46
PTPN20-218ENST00000508357 NEUROD1Q13562 356 aa17.95■□□□□ 0.46
PTPN20-218ENST00000508357 STK26Q9P289 416 aa17.95■□□□□ 0.46
PTPN20-218ENST00000508357 MST1RQ04912 1400 aa17.95■□□□□ 0.46
PTPN20-218ENST00000508357 STAC3Q96MF2 364 aa17.94■□□□□ 0.46
PTPN20-218ENST00000508357 ARHGEF28Q8N1W1 1705 aaKnown RBP17.94■□□□□ 0.46
PTPN20-218ENST00000508357 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
PTPN20-218ENST00000508357 TRPM1Q7Z4N2 1603 aa17.94■□□□□ 0.46
PTPN20-218ENST00000508357 FAM135BQ49AJ0 1406 aa17.93■□□□□ 0.46
PTPN20-218ENST00000508357 C19orf44Q9H6X5 657 aa17.93■□□□□ 0.46
PTPN20-218ENST00000508357 C14orf37Q86TY3 774 aa17.92■□□□□ 0.46
PTPN20-218ENST00000508357 HSPA1LP34931 641 aa17.91■□□□□ 0.46
PTPN20-218ENST00000508357 WAPLQ7Z5K2 1190 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms