RNA–Protein interactions for RNA: ENST00000508338.1

SH3BP2-212, Transcript of SH3 domain binding protein 2, humanhuman

TSL 3

Gene SH3BP2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-212ENST00000508338 ZFYVE9O95405 1425 aa39.32■■■■□ 3.89
SH3BP2-212ENST00000508338 RIMS2Q9UQ26 1411 aa39.32■■■■□ 3.89
SH3BP2-212ENST00000508338 LTKP29376 864 aa39.3■■■■□ 3.88
SH3BP2-212ENST00000508338 IQGAP1P46940 1657 aa39.29■■■■□ 3.88
SH3BP2-212ENST00000508338 ZNF326Q5BKZ1 582 aaKnown RBP39.29■■■■□ 3.88
SH3BP2-212ENST00000508338 PCGF6Q9BYE7 350 aa39.29■■■■□ 3.88
SH3BP2-212ENST00000508338 RPGRIP1LQ68CZ1 1315 aa39.26■■■■□ 3.88
SH3BP2-212ENST00000508338 PPP1R15AO75807 674 aaPredicted RBP39.26■■■■□ 3.88
SH3BP2-212ENST00000508338 PLEKHG1Q9ULL1 1385 aa39.2■■■■□ 3.87
SH3BP2-212ENST00000508338 SPATA31E1Q6ZUB1 1445 aa39.19■■■■□ 3.86
SH3BP2-212ENST00000508338 NEXMIFQ5QGS0 1516 aa39.16■■■■□ 3.86
SH3BP2-212ENST00000508338 DHX57Q6P158 1386 aaKnown RBP39.16■■■■□ 3.86
SH3BP2-212ENST00000508338 VGFO15240 615 aaPredicted RBP39.14■■■■□ 3.86
SH3BP2-212ENST00000508338 BCANQ96GW7 911 aa39.1■■■■□ 3.85
SH3BP2-212ENST00000508338 PPLO60437 1756 aa39.1■■■■□ 3.85
SH3BP2-212ENST00000508338 RGL3Q3MIN7 710 aa39.07■■■■□ 3.85
SH3BP2-212ENST00000508338 DIP2AQ14689 1571 aa39.05■■■■□ 3.84
SH3BP2-212ENST00000508338 NUTM2DQ5VT03 806 aaPredicted RBP39.04■■■■□ 3.84
SH3BP2-212ENST00000508338 SETBP1Q9Y6X0 1596 aa39.03■■■■□ 3.84
SH3BP2-212ENST00000508338 STAC3Q96MF2 364 aa39.02■■■■□ 3.84
SH3BP2-212ENST00000508338 IFT172Q9UG01 1749 aa39.02■■■■□ 3.84
SH3BP2-212ENST00000508338 TBX22Q9Y458 520 aa39.01■■■■□ 3.84
SH3BP2-212ENST00000508338 SLC26A8Q96RN1 970 aa38.97■■■■□ 3.83
SH3BP2-212ENST00000508338 ZNF335Q9H4Z2 1342 aaPredicted RBP38.96■■■■□ 3.83
SH3BP2-212ENST00000508338 ADAMTS13Q76LX8 1427 aa38.95■■■■□ 3.83
SH3BP2-212ENST00000508338 PIK3R4Q99570 1358 aa38.95■■■■□ 3.83
SH3BP2-212ENST00000508338 CPS1P31327 1500 aa38.94■■■■□ 3.82
SH3BP2-212ENST00000508338 LTBP4Q8N2S1 1624 aa38.94■■■■□ 3.82
SH3BP2-212ENST00000508338 MYOM2P54296 1465 aa38.93■■■■□ 3.82
SH3BP2-212ENST00000508338 NRXN3Q9Y4C0 1643 aa38.91■■■■□ 3.82
SH3BP2-212ENST00000508338 KCNA6P17658 529 aa38.87■■■■□ 3.81
SH3BP2-212ENST00000508338 ADGRF5Q8IZF2 1346 aa38.84■■■■□ 3.81
SH3BP2-212ENST00000508338 SENP3Q9H4L4 574 aaPredicted RBP38.83■■■■□ 3.81
SH3BP2-212ENST00000508338 CHD2O14647 1828 aaKnown RBP38.83■■■■□ 3.81
SH3BP2-212ENST00000508338 IQSEC2Q5JU85 1478 aa38.83■■■■□ 3.81
SH3BP2-212ENST00000508338 NRXN1Q9ULB1 1477 aa38.83■■■■□ 3.81
SH3BP2-212ENST00000508338 CLSPNQ9HAW4 1339 aa38.83■■■■□ 3.81
SH3BP2-212ENST00000508338 NWD1Q149M9 1564 aa38.82■■■■□ 3.81
SH3BP2-212ENST00000508338 PIK3C2GO75747 1445 aa38.82■■■■□ 3.81
SH3BP2-212ENST00000508338 CERKQ8TCT0 537 aa38.82■■■■□ 3.8
SH3BP2-212ENST00000508338 DCAF11Q8TEB1 546 aa38.82■■■■□ 3.8
SH3BP2-212ENST00000508338 ALKQ9UM73 1620 aa38.81■■■■□ 3.8
SH3BP2-212ENST00000508338 NKTRP30414 1462 aaKnown RBP38.79■■■■□ 3.8
SH3BP2-212ENST00000508338 SIN3AQ96ST3 1273 aa38.79■■■■□ 3.8
SH3BP2-212ENST00000508338 STRCP1A6NGW2 1772 aa38.78■■■■□ 3.8
SH3BP2-212ENST00000508338 NEUROD1Q13562 356 aa38.77■■■■□ 3.8
SH3BP2-212ENST00000508338 LAMC1P11047 1609 aa38.77■■■■□ 3.8
SH3BP2-212ENST00000508338 SETD1AO15047 1707 aaKnown RBP38.75■■■■□ 3.79
SH3BP2-212ENST00000508338 KDM2AQ9Y2K7 1162 aa38.72■■■■□ 3.79
SH3BP2-212ENST00000508338 METP08581 1390 aa38.71■■■■□ 3.79
SH3BP2-212ENST00000508338 LRRC7Q96NW7 1537 aa38.69■■■■□ 3.78
SH3BP2-212ENST00000508338 C14orf93Q9H972 538 aaKnown RBP38.69■■■■□ 3.78
SH3BP2-212ENST00000508338 AMOTL2Q9Y2J4 779 aa38.68■■■■□ 3.78
SH3BP2-212ENST00000508338 XRN1Q8IZH2 1706 aaKnown RBP38.66■■■■□ 3.78
SH3BP2-212ENST00000508338 L3MBTL2Q969R5 705 aa38.65■■■■□ 3.78
SH3BP2-212ENST00000508338 PTPRUQ92729 1446 aa38.64■■■■□ 3.78
SH3BP2-212ENST00000508338 PROSER2Q86WR7 435 aaPredicted RBP38.64■■■■□ 3.78
SH3BP2-212ENST00000508338 TONSLQ96HA7 1378 aa38.64■■■■□ 3.78
SH3BP2-212ENST00000508338 NCOA3Q9Y6Q9 1424 aa38.63■■■■□ 3.77
SH3BP2-212ENST00000508338 CCER1Q8TC90 406 aaPredicted RBP38.62■■■■□ 3.77
SH3BP2-212ENST00000508338 PRAG1Q86YV5 1406 aa38.62■■■■□ 3.77
SH3BP2-212ENST00000508338 CFAP70Q5T0N1 1121 aa38.58■■■■□ 3.77
SH3BP2-212ENST00000508338 KIAA1210Q9ULL0 1709 aa38.58■■■■□ 3.77
SH3BP2-212ENST00000508338 TMEM94Q12767 1356 aa38.57■■■■□ 3.76
SH3BP2-212ENST00000508338 PTCH1Q13635 1447 aa38.56■■■■□ 3.76
SH3BP2-212ENST00000508338 LRPPRCP42704 1394 aaKnown RBP38.55■■■■□ 3.76
SH3BP2-212ENST00000508338 TIMELESSQ9UNS1 1208 aa38.54■■■■□ 3.76
SH3BP2-212ENST00000508338 XIRP1Q702N8 1843 aaKnown RBP38.52■■■■□ 3.76
SH3BP2-212ENST00000508338 ABCC11Q96J66 1382 aa38.52■■■■□ 3.76
SH3BP2-212ENST00000508338 TECPR2O15040 1411 aa38.52■■■■□ 3.76
SH3BP2-212ENST00000508338 YTHDC2Q9H6S0 1430 aaKnown RBP38.51■■■■□ 3.76
SH3BP2-212ENST00000508338 ASXL1Q8IXJ9 1541 aa38.51■■■■□ 3.76
SH3BP2-212ENST00000508338 KNDC1Q76NI1 1749 aa38.51■■■■□ 3.76
SH3BP2-212ENST00000508338 TMEM132EQ6IEE7 984 aa38.48■■■■□ 3.75
SH3BP2-212ENST00000508338 ADGRB1O14514 1584 aa38.47■■■■□ 3.75
SH3BP2-212ENST00000508338 MSH6P52701 1360 aa38.46■■■■□ 3.75
SH3BP2-212ENST00000508338 SIRT1Q96EB6 747 aa38.46■■■■□ 3.75
SH3BP2-212ENST00000508338 TOM1O60784 492 aa38.45■■■■□ 3.75
SH3BP2-212ENST00000508338 FBXO41Q8TF61 875 aa38.45■■■■□ 3.75
SH3BP2-212ENST00000508338 C14orf37Q86TY3 774 aa38.43■■■■□ 3.74
SH3BP2-212ENST00000508338 STK26Q9P289 416 aa38.42■■■■□ 3.74
SH3BP2-212ENST00000508338 ROBO2Q9HCK4 1378 aa38.42■■■■□ 3.74
SH3BP2-212ENST00000508338 FAM135BQ49AJ0 1406 aa38.4■■■■□ 3.74
SH3BP2-212ENST00000508338 C19orf44Q9H6X5 657 aa38.4■■■■□ 3.74
SH3BP2-212ENST00000508338 DLC1Q96QB1 1528 aa38.39■■■■□ 3.74
SH3BP2-212ENST00000508338 UBAP1LF5GYI3 381 aa38.39■■■■□ 3.74
SH3BP2-212ENST00000508338 RBM33Q96EV2 1170 aaKnown RBP38.37■■■■□ 3.73
SH3BP2-212ENST00000508338 DCCP43146 1447 aa38.36■■■■□ 3.73
SH3BP2-212ENST00000508338 TRPM1Q7Z4N2 1603 aa38.35■■■■□ 3.73
SH3BP2-212ENST00000508338 ADGRL3Q9HAR2 1447 aa38.34■■■■□ 3.73
SH3BP2-212ENST00000508338 CADPS2Q86UW7 1296 aa38.32■■■■□ 3.72
SH3BP2-212ENST00000508338 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.3■■■■□ 3.72
SH3BP2-212ENST00000508338 ATF3P18847 181 aa38.3■■■■□ 3.72
SH3BP2-212ENST00000508338 NBPF1Q3BBV0 1214 aa38.27■■■■□ 3.72
SH3BP2-212ENST00000508338 TRAK1Q9UPV9 953 aa38.27■■■■□ 3.72
SH3BP2-212ENST00000508338 ROCK2O75116 1388 aaKnown RBP38.27■■■■□ 3.72
SH3BP2-212ENST00000508338 NALCNQ8IZF0 1738 aa38.26■■■■□ 3.72
SH3BP2-212ENST00000508338 NBPF8Q3BBV2 869 aa38.25■■■■□ 3.71
SH3BP2-212ENST00000508338 POGKQ9P215 609 aa38.25■■■■□ 3.71
SH3BP2-212ENST00000508338 WAPLQ7Z5K2 1190 aa38.23■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms