RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 PLEKHG1Q9ULL1 1385 aa29.66■■■□□ 2.34
SFXN1-209ENST00000508290 SETD5Q9C0A6 1442 aa29.66■■■□□ 2.34
SFXN1-209ENST00000508290 PPP1R15AO75807 674 aaPredicted RBP29.66■■■□□ 2.34
SFXN1-209ENST00000508290 MYO5BQ9ULV0 1848 aa29.59■■■□□ 2.33
SFXN1-209ENST00000508290 BCANQ96GW7 911 aa29.58■■■□□ 2.33
SFXN1-209ENST00000508290 CLTCL1P53675 1640 aa29.56■■■□□ 2.32
SFXN1-209ENST00000508290 LRRC7Q96NW7 1537 aa29.55■■■□□ 2.32
SFXN1-209ENST00000508290 UBAP1LF5GYI3 381 aa29.55■■■□□ 2.32
SFXN1-209ENST00000508290 MPHOSPH9Q99550 1183 aa29.55■■■□□ 2.32
SFXN1-209ENST00000508290 DIP2AQ14689 1571 aa29.55■■■□□ 2.32
SFXN1-209ENST00000508290 KCNA6P17658 529 aa29.54■■■□□ 2.32
SFXN1-209ENST00000508290 SLC26A8Q96RN1 970 aa29.54■■■□□ 2.32
SFXN1-209ENST00000508290 TBX22Q9Y458 520 aa29.53■■■□□ 2.32
SFXN1-209ENST00000508290 TOM1O60784 492 aa29.52■■■□□ 2.32
SFXN1-209ENST00000508290 NKTRP30414 1462 aaKnown RBP29.51■■■□□ 2.31
SFXN1-209ENST00000508290 ZNF326Q5BKZ1 582 aaKnown RBP29.51■■■□□ 2.31
SFXN1-209ENST00000508290 STRCP1A6NGW2 1772 aa29.51■■■□□ 2.31
SFXN1-209ENST00000508290 PIK3R4Q99570 1358 aa29.51■■■□□ 2.31
SFXN1-209ENST00000508290 RAB3GAP2Q9H2M9 1393 aa29.51■■■□□ 2.31
SFXN1-209ENST00000508290 HRCP23327 699 aa29.5■■■□□ 2.31
SFXN1-209ENST00000508290 NWD1Q149M9 1564 aa29.49■■■□□ 2.31
SFXN1-209ENST00000508290 KIF1BO60333 1816 aa29.49■■■□□ 2.31
SFXN1-209ENST00000508290 CCDC144AA2RUR9 1427 aa29.47■■■□□ 2.31
SFXN1-209ENST00000508290 RPGRIP1LQ68CZ1 1315 aa29.46■■■□□ 2.31
SFXN1-209ENST00000508290 ADAMTS13Q76LX8 1427 aa29.45■■■□□ 2.31
SFXN1-209ENST00000508290 NEXMIFQ5QGS0 1516 aa29.44■■■□□ 2.3
SFXN1-209ENST00000508290 SETBP1Q9Y6X0 1596 aa29.43■■■□□ 2.3
SFXN1-209ENST00000508290 NUTM2DQ5VT03 806 aaPredicted RBP29.42■■■□□ 2.3
SFXN1-209ENST00000508290 VGFO15240 615 aaPredicted RBP29.41■■■□□ 2.3
SFXN1-209ENST00000508290 FOXD1Q16676 465 aa29.39■■■□□ 2.3
SFXN1-209ENST00000508290 TMEM94Q12767 1356 aa29.39■■■□□ 2.29
SFXN1-209ENST00000508290 PROSER2Q86WR7 435 aaPredicted RBP29.38■■■□□ 2.29
SFXN1-209ENST00000508290 NCOA3Q9Y6Q9 1424 aa29.37■■■□□ 2.29
SFXN1-209ENST00000508290 CHD2O14647 1828 aaKnown RBP29.36■■■□□ 2.29
SFXN1-209ENST00000508290 NRXN3Q9Y4C0 1643 aa29.33■■■□□ 2.29
SFXN1-209ENST00000508290 SPATA31E1Q6ZUB1 1445 aa29.32■■■□□ 2.28
SFXN1-209ENST00000508290 SENP3Q9H4L4 574 aaPredicted RBP29.31■■■□□ 2.28
SFXN1-209ENST00000508290 ANKRD30BQ9BXX2 1392 aa29.29■■■□□ 2.28
SFXN1-209ENST00000508290 SCAF1Q9H7N4 1312 aaKnown RBP29.29■■■□□ 2.28
SFXN1-209ENST00000508290 PIP4K2BP78356 416 aa29.29■■■□□ 2.28
SFXN1-209ENST00000508290 ALKQ9UM73 1620 aa29.29■■■□□ 2.28
SFXN1-209ENST00000508290 XIRP1Q702N8 1843 aaKnown RBP29.29■■■□□ 2.28
SFXN1-209ENST00000508290 MSH6P52701 1360 aa29.28■■■□□ 2.28
SFXN1-209ENST00000508290 AMOTL2Q9Y2J4 779 aa29.26■■■□□ 2.27
SFXN1-209ENST00000508290 PPLO60437 1756 aa29.26■■■□□ 2.27
SFXN1-209ENST00000508290 PTPRUQ92729 1446 aa29.22■■■□□ 2.27
SFXN1-209ENST00000508290 METP08581 1390 aa29.22■■■□□ 2.27
SFXN1-209ENST00000508290 XRN1Q8IZH2 1706 aaKnown RBP29.22■■■□□ 2.27
SFXN1-209ENST00000508290 RGL3Q3MIN7 710 aa29.2■■■□□ 2.26
SFXN1-209ENST00000508290 FAM135BQ49AJ0 1406 aa29.19■■■□□ 2.26
SFXN1-209ENST00000508290 PRAG1Q86YV5 1406 aa29.18■■■□□ 2.26
SFXN1-209ENST00000508290 C14orf37Q86TY3 774 aa29.17■■■□□ 2.26
SFXN1-209ENST00000508290 C19orf44Q9H6X5 657 aa29.17■■■□□ 2.26
SFXN1-209ENST00000508290 RBM33Q96EV2 1170 aaKnown RBP29.16■■■□□ 2.26
SFXN1-209ENST00000508290 IFT172Q9UG01 1749 aa29.16■■■□□ 2.26
SFXN1-209ENST00000508290 DCCP43146 1447 aa29.15■■■□□ 2.26
SFXN1-209ENST00000508290 HSPA1LP34931 641 aa29.15■■■□□ 2.26
SFXN1-209ENST00000508290 CADPS2Q86UW7 1296 aa29.15■■■□□ 2.26
SFXN1-209ENST00000508290 PTCH1Q13635 1447 aa29.14■■■□□ 2.26
SFXN1-209ENST00000508290 MYOM2P54296 1465 aa29.12■■■□□ 2.25
SFXN1-209ENST00000508290 SETD1AO15047 1707 aaKnown RBP29.12■■■□□ 2.25
SFXN1-209ENST00000508290 ADGRF5Q8IZF2 1346 aa29.12■■■□□ 2.25
SFXN1-209ENST00000508290 PIK3C2GO75747 1445 aa29.11■■■□□ 2.25
SFXN1-209ENST00000508290 STAC3Q96MF2 364 aa29.11■■■□□ 2.25
SFXN1-209ENST00000508290 ATF3P18847 181 aa29.1■■■□□ 2.25
SFXN1-209ENST00000508290 SLAIN2Q9P270 581 aa29.1■■■□□ 2.25
SFXN1-209ENST00000508290 NRXN1Q9ULB1 1477 aa29.07■■■□□ 2.24
SFXN1-209ENST00000508290 ADGRL3Q9HAR2 1447 aa29.05■■■□□ 2.24
SFXN1-209ENST00000508290 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.04■■■□□ 2.24
SFXN1-209ENST00000508290 LAMC1P11047 1609 aa29.03■■■□□ 2.24
SFXN1-209ENST00000508290 ROBO1Q9Y6N7 1651 aa29.02■■■□□ 2.24
SFXN1-209ENST00000508290 TECPR2O15040 1411 aa29.01■■■□□ 2.23
SFXN1-209ENST00000508290 LRPPRCP42704 1394 aaKnown RBP29.01■■■□□ 2.23
SFXN1-209ENST00000508290 ROBO2Q9HCK4 1378 aa29■■■□□ 2.23
SFXN1-209ENST00000508290 C14orf93Q9H972 538 aaKnown RBP28.99■■■□□ 2.23
SFXN1-209ENST00000508290 ABCC11Q96J66 1382 aa28.98■■■□□ 2.23
SFXN1-209ENST00000508290 TRIM26Q12899 539 aaPredicted RBP28.95■■■□□ 2.22
SFXN1-209ENST00000508290 DISP3Q9P2K9 1392 aa28.93■■■□□ 2.22
SFXN1-209ENST00000508290 SIRT1Q96EB6 747 aa28.93■■■□□ 2.22
SFXN1-209ENST00000508290 ASXL1Q8IXJ9 1541 aa28.93■■■□□ 2.22
SFXN1-209ENST00000508290 YTHDC2Q9H6S0 1430 aaKnown RBP28.93■■■□□ 2.22
SFXN1-209ENST00000508290 KNDC1Q76NI1 1749 aa28.92■■■□□ 2.22
SFXN1-209ENST00000508290 NALCNQ8IZF0 1738 aa28.92■■■□□ 2.22
SFXN1-209ENST00000508290 DHX57Q6P158 1386 aaKnown RBP28.92■■■□□ 2.22
SFXN1-209ENST00000508290 DCAF11Q8TEB1 546 aa28.92■■■□□ 2.22
SFXN1-209ENST00000508290 MST1RQ04912 1400 aa28.92■■■□□ 2.22
SFXN1-209ENST00000508290 CFAP70Q5T0N1 1121 aa28.89■■■□□ 2.22
SFXN1-209ENST00000508290 TMEM132EQ6IEE7 984 aa28.88■■■□□ 2.21
SFXN1-209ENST00000508290 STK26Q9P289 416 aa28.87■■■□□ 2.21
SFXN1-209ENST00000508290 AHDC1Q5TGY3 1603 aaPredicted RBP28.87■■■□□ 2.21
SFXN1-209ENST00000508290 BRINP3Q76B58 766 aa28.86■■■□□ 2.21
SFXN1-209ENST00000508290 CDC42BPGQ6DT37 1551 aa28.85■■■□□ 2.21
SFXN1-209ENST00000508290 MED1Q15648 1581 aaPredicted RBP28.84■■■□□ 2.21
SFXN1-209ENST00000508290 KDM2AQ9Y2K7 1162 aa28.84■■■□□ 2.21
SFXN1-209ENST00000508290 PHLPP1O60346 1717 aa28.83■■■□□ 2.21
SFXN1-209ENST00000508290 DLC1Q96QB1 1528 aa28.82■■■□□ 2.2
SFXN1-209ENST00000508290 C1orf167Q5SNV9 1468 aa28.81■■■□□ 2.2
SFXN1-209ENST00000508290 JCADQ9P266 1359 aa28.81■■■□□ 2.2
SFXN1-209ENST00000508290 ADGRB1O14514 1584 aa28.8■■■□□ 2.2
SFXN1-209ENST00000508290 COL16A1Q07092 1604 aaPredicted RBP28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms