RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 L3MBTL2Q969R5 705 aa15.44■□□□□ 0.06
TRIM6-209ENST00000507320 IFT172Q9UG01 1749 aa15.44■□□□□ 0.06
TRIM6-209ENST00000507320 ZFYVE9O95405 1425 aa15.44■□□□□ 0.06
TRIM6-209ENST00000507320 ARHGAP23Q9P227 1491 aa15.44■□□□□ 0.06
TRIM6-209ENST00000507320 SLIT1O75093 1534 aa15.43■□□□□ 0.06
TRIM6-209ENST00000507320 PPLO60437 1756 aa15.43■□□□□ 0.06
TRIM6-209ENST00000507320 TONSLQ96HA7 1378 aa15.43■□□□□ 0.06
TRIM6-209ENST00000507320 RIMS2Q9UQ26 1411 aa15.42■□□□□ 0.06
TRIM6-209ENST00000507320 LTKP29376 864 aa15.41■□□□□ 0.06
TRIM6-209ENST00000507320 DCAF11Q8TEB1 546 aa15.41■□□□□ 0.06
TRIM6-209ENST00000507320 KDM2AQ9Y2K7 1162 aa15.4■□□□□ 0.06
TRIM6-209ENST00000507320 RPGRIP1LQ68CZ1 1315 aa15.4■□□□□ 0.06
TRIM6-209ENST00000507320 TXNDC2Q86VQ3 553 aa15.39■□□□□ 0.05
TRIM6-209ENST00000507320 ADGRF5Q8IZF2 1346 aa15.39■□□□□ 0.05
TRIM6-209ENST00000507320 SCAF11Q99590 1463 aaKnown RBP15.37■□□□□ 0.05
TRIM6-209ENST00000507320 MYOM2P54296 1465 aa15.37■□□□□ 0.05
TRIM6-209ENST00000507320 NCKAP5LQ9HCH0 1330 aa15.37■□□□□ 0.05
TRIM6-209ENST00000507320 POLR1AO95602 1720 aaPredicted RBP15.37■□□□□ 0.05
TRIM6-209ENST00000507320 ANKLE2Q86XL3 938 aa15.36■□□□□ 0.05
TRIM6-209ENST00000507320 EID1Q9Y6B2 187 aa15.36■□□□□ 0.05
TRIM6-209ENST00000507320 STRCQ7RTU9 1775 aa15.36■□□□□ 0.05
TRIM6-209ENST00000507320 PPP1R15AO75807 674 aaPredicted RBP15.36■□□□□ 0.05
TRIM6-209ENST00000507320 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.36■□□□□ 0.05
TRIM6-209ENST00000507320 TIMELESSQ9UNS1 1208 aa15.36■□□□□ 0.05
TRIM6-209ENST00000507320 VGFO15240 615 aaPredicted RBP15.35■□□□□ 0.05
TRIM6-209ENST00000507320 NRXN1Q9ULB1 1477 aa15.35■□□□□ 0.05
TRIM6-209ENST00000507320 HDGFP51858 240 aaKnown RBP15.34■□□□□ 0.05
TRIM6-209ENST00000507320 NRXN3Q9Y4C0 1643 aa15.34■□□□□ 0.05
TRIM6-209ENST00000507320 NBPF8Q3BBV2 869 aa15.33■□□□□ 0.04
TRIM6-209ENST00000507320 PIK3C2GO75747 1445 aa15.33■□□□□ 0.04
TRIM6-209ENST00000507320 PRAG1Q86YV5 1406 aa15.33■□□□□ 0.04
TRIM6-209ENST00000507320 PLEKHG1Q9ULL1 1385 aa15.33■□□□□ 0.04
TRIM6-209ENST00000507320 IQGAP1P46940 1657 aa15.32■□□□□ 0.04
TRIM6-209ENST00000507320 MED14O60244 1454 aa15.32■□□□□ 0.04
TRIM6-209ENST00000507320 STAC3Q96MF2 364 aa15.31■□□□□ 0.04
TRIM6-209ENST00000507320 SETBP1Q9Y6X0 1596 aa15.3■□□□□ 0.04
TRIM6-209ENST00000507320 NPHP4O75161 1426 aaPredicted RBP15.3■□□□□ 0.04
TRIM6-209ENST00000507320 ADAMTS13Q76LX8 1427 aa15.3■□□□□ 0.04
TRIM6-209ENST00000507320 BCANQ96GW7 911 aa15.29■□□□□ 0.04
TRIM6-209ENST00000507320 SLC26A8Q96RN1 970 aa15.29■□□□□ 0.04
TRIM6-209ENST00000507320 CFAP70Q5T0N1 1121 aa15.29■□□□□ 0.04
TRIM6-209ENST00000507320 SETD1AO15047 1707 aaKnown RBP15.29■□□□□ 0.04
TRIM6-209ENST00000507320 ALKQ9UM73 1620 aa15.28■□□□□ 0.04
TRIM6-209ENST00000507320 TRPM1Q7Z4N2 1603 aa15.27■□□□□ 0.03
TRIM6-209ENST00000507320 C14orf93Q9H972 538 aaKnown RBP15.26■□□□□ 0.03
TRIM6-209ENST00000507320 NBPF1Q3BBV0 1214 aa15.26■□□□□ 0.03
TRIM6-209ENST00000507320 ASXL1Q8IXJ9 1541 aa15.25■□□□□ 0.03
TRIM6-209ENST00000507320 MYT1Q01538 1121 aa15.25■□□□□ 0.03
TRIM6-209ENST00000507320 METP08581 1390 aa15.25■□□□□ 0.03
TRIM6-209ENST00000507320 KIAA1210Q9ULL0 1709 aa15.24■□□□□ 0.03
TRIM6-209ENST00000507320 TMEM132EQ6IEE7 984 aa15.24■□□□□ 0.03
TRIM6-209ENST00000507320 LAMC1P11047 1609 aa15.24■□□□□ 0.03
TRIM6-209ENST00000507320 RALGAPBQ86X10 1494 aa15.23■□□□□ 0.03
TRIM6-209ENST00000507320 ADGRB1O14514 1584 aa15.23■□□□□ 0.03
TRIM6-209ENST00000507320 DIP2AQ14689 1571 aa15.23■□□□□ 0.03
TRIM6-209ENST00000507320 PELP1Q8IZL8 1130 aaKnown RBP15.23■□□□□ 0.03
TRIM6-209ENST00000507320 TBX22Q9Y458 520 aa15.23■□□□□ 0.03
TRIM6-209ENST00000507320 ZEB1P37275 1124 aaPredicted RBP15.21■□□□□ 0.03
TRIM6-209ENST00000507320 ROCK2O75116 1388 aaKnown RBP15.21■□□□□ 0.02
TRIM6-209ENST00000507320 PTPRUQ92729 1446 aa15.21■□□□□ 0.02
TRIM6-209ENST00000507320 GPRASP1Q5JY77 1395 aa15.19■□□□□ 0.02
TRIM6-209ENST00000507320 CHD2O14647 1828 aaKnown RBP15.19■□□□□ 0.02
TRIM6-209ENST00000507320 DMRT2Q9Y5R5 561 aa15.19■□□□□ 0.02
TRIM6-209ENST00000507320 YTHDC2Q9H6S0 1430 aaKnown RBP15.17■□□□□ 0.02
TRIM6-209ENST00000507320 STK26Q9P289 416 aa15.17■□□□□ 0.02
TRIM6-209ENST00000507320 STRCP1A6NGW2 1772 aa15.17■□□□□ 0.02
TRIM6-209ENST00000507320 CARD11Q9BXL7 1154 aa15.16■□□□□ 0.02
TRIM6-209ENST00000507320 PIK3R4Q99570 1358 aa15.16■□□□□ 0.02
TRIM6-209ENST00000507320 XRN1Q8IZH2 1706 aaKnown RBP15.16■□□□□ 0.02
TRIM6-209ENST00000507320 AMOTL2Q9Y2J4 779 aa15.16■□□□□ 0.02
TRIM6-209ENST00000507320 LRPPRCP42704 1394 aaKnown RBP15.15■□□□□ 0.02
TRIM6-209ENST00000507320 ZNF335Q9H4Z2 1342 aaPredicted RBP15.15■□□□□ 0.02
TRIM6-209ENST00000507320 TRAK1Q9UPV9 953 aa15.15■□□□□ 0.02
TRIM6-209ENST00000507320 KCNA6P17658 529 aa15.14■□□□□ 0.01
TRIM6-209ENST00000507320 NWD1Q149M9 1564 aa15.14■□□□□ 0.01
TRIM6-209ENST00000507320 ABCC11Q96J66 1382 aa15.13■□□□□ 0.01
TRIM6-209ENST00000507320 KNDC1Q76NI1 1749 aa15.13■□□□□ 0.01
TRIM6-209ENST00000507320 ARHGEF28Q8N1W1 1705 aaKnown RBP15.13■□□□□ 0.01
TRIM6-209ENST00000507320 TECPR2O15040 1411 aa15.12■□□□□ 0.01
TRIM6-209ENST00000507320 ROBO2Q9HCK4 1378 aa15.12■□□□□ 0.01
TRIM6-209ENST00000507320 CPS1P31327 1500 aa15.11■□□□□ 0.01
TRIM6-209ENST00000507320 USP47Q96K76 1375 aa15.1■□□□□ 0.01
TRIM6-209ENST00000507320 PLEKHH1Q9ULM0 1364 aa15.1■□□□□ 0.01
TRIM6-209ENST00000507320 WAPLQ7Z5K2 1190 aa15.1■□□□□ 0.01
TRIM6-209ENST00000507320 RBM33Q96EV2 1170 aaKnown RBP15.1■□□□□ 0.01
TRIM6-209ENST00000507320 DLC1Q96QB1 1528 aa15.1■□□□□ 0.01
TRIM6-209ENST00000507320 PTCH1Q13635 1447 aa15.1■□□□□ 0.01
TRIM6-209ENST00000507320 PRAM1Q96QH2 718 aa15.08■□□□□ 0.01
TRIM6-209ENST00000507320 NKTRP30414 1462 aaKnown RBP15.08■□□□□ 0
TRIM6-209ENST00000507320 SAFB2Q14151 953 aaKnown RBP eCLIP15.08■□□□□ 0
TRIM6-209ENST00000507320 LTBP4Q8N2S1 1624 aa15.07■□□□□ 0
TRIM6-209ENST00000507320 FAM135BQ49AJ0 1406 aa15.06■□□□□ 0
TRIM6-209ENST00000507320 ST20-MTHFSA0A0A6YYL1 179 aa15.06■□□□□ 0
TRIM6-209ENST00000507320 HIRIP3Q9BW71 556 aaPredicted RBP15.06■□□□□ 0
TRIM6-209ENST00000507320 SIRT1Q96EB6 747 aa15.06■□□□□ 0
TRIM6-209ENST00000507320 XIRP1Q702N8 1843 aaKnown RBP15.06■□□□□ 0
TRIM6-209ENST00000507320 LRRC7Q96NW7 1537 aa15.05■□□□□ -0
TRIM6-209ENST00000507320 HSPA5P11021 654 aaKnown RBP15.05■□□□□ -0
TRIM6-209ENST00000507320 EIF4G2P78344 907 aaKnown RBP eCLIP15.05■□□□□ -0
TRIM6-209ENST00000507320 PROSER2Q86WR7 435 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms