RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 PROSER2Q86WR7 435 aaPredicted RBP25.9■■□□□ 1.74
SNF8-205ENST00000507302 MYO5BQ9ULV0 1848 aa25.87■■□□□ 1.73
SNF8-205ENST00000507302 PHLPP1O60346 1717 aa25.85■■□□□ 1.73
SNF8-205ENST00000507302 PLEKHG1Q9ULL1 1385 aa25.85■■□□□ 1.73
SNF8-205ENST00000507302 MSH6P52701 1360 aa25.84■■□□□ 1.73
SNF8-205ENST00000507302 TMEM131LA2VDJ0 1609 aa25.84■■□□□ 1.73
SNF8-205ENST00000507302 NCOA3Q9Y6Q9 1424 aa25.83■■□□□ 1.73
SNF8-205ENST00000507302 RBM33Q96EV2 1170 aaKnown RBP25.83■■□□□ 1.73
SNF8-205ENST00000507302 COL16A1Q07092 1604 aaPredicted RBP25.83■■□□□ 1.73
SNF8-205ENST00000507302 GCC2Q8IWJ2 1684 aa25.83■■□□□ 1.73
SNF8-205ENST00000507302 SLAIN2Q9P270 581 aa25.82■■□□□ 1.72
SNF8-205ENST00000507302 CHIC2Q9UKJ5 165 aa25.82■■□□□ 1.72
SNF8-205ENST00000507302 JCADQ9P266 1359 aa25.81■■□□□ 1.72
SNF8-205ENST00000507302 ANKRD50Q9ULJ7 1429 aa25.77■■□□□ 1.72
SNF8-205ENST00000507302 RIMS2Q9UQ26 1411 aa25.77■■□□□ 1.72
SNF8-205ENST00000507302 SETD1AO15047 1707 aaKnown RBP25.77■■□□□ 1.72
SNF8-205ENST00000507302 TBX22Q9Y458 520 aa25.76■■□□□ 1.71
SNF8-205ENST00000507302 UNC13BO14795 1591 aa25.75■■□□□ 1.71
SNF8-205ENST00000507302 APLP2Q06481 763 aa25.74■■□□□ 1.71
SNF8-205ENST00000507302 AHDC1Q5TGY3 1603 aaPredicted RBP25.74■■□□□ 1.71
SNF8-205ENST00000507302 DIP2AQ14689 1571 aa25.73■■□□□ 1.71
SNF8-205ENST00000507302 ADAMTS13Q76LX8 1427 aa25.73■■□□□ 1.71
SNF8-205ENST00000507302 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.71■■□□□ 1.71
SNF8-205ENST00000507302 LRP6O75581 1613 aa25.71■■□□□ 1.71
SNF8-205ENST00000507302 HDGFP51858 240 aaKnown RBP25.71■■□□□ 1.71
SNF8-205ENST00000507302 SHPRHQ149N8 1683 aa25.71■■□□□ 1.71
SNF8-205ENST00000507302 PIK3R4Q99570 1358 aa25.7■■□□□ 1.71
SNF8-205ENST00000507302 E9PCH4 1651 aa25.7■■□□□ 1.7
SNF8-205ENST00000507302 SPATA31A6Q5VVP1 1343 aa25.68■■□□□ 1.7
SNF8-205ENST00000507302 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.67■■□□□ 1.7
SNF8-205ENST00000507302 BCANQ96GW7 911 aa25.66■■□□□ 1.7
SNF8-205ENST00000507302 IQGAP3Q86VI3 1631 aa25.64■■□□□ 1.7
SNF8-205ENST00000507302 PPP1R15AO75807 674 aaPredicted RBP25.63■■□□□ 1.69
SNF8-205ENST00000507302 C19orf44Q9H6X5 657 aa25.63■■□□□ 1.69
SNF8-205ENST00000507302 CADPS2Q86UW7 1296 aa25.62■■□□□ 1.69
SNF8-205ENST00000507302 TRPM2O94759 1503 aa25.6■■□□□ 1.69
SNF8-205ENST00000507302 DCCP43146 1447 aa25.59■■□□□ 1.69
SNF8-205ENST00000507302 PTPRUQ92729 1446 aa25.59■■□□□ 1.69
SNF8-205ENST00000507302 ZNF772Q68DY9 489 aaPredicted RBP25.58■■□□□ 1.69
SNF8-205ENST00000507302 ROCK1Q13464 1354 aa25.57■■□□□ 1.68
SNF8-205ENST00000507302 XRN1Q8IZH2 1706 aaKnown RBP25.57■■□□□ 1.68
SNF8-205ENST00000507302 NRXN3Q9Y4C0 1643 aa25.57■■□□□ 1.68
SNF8-205ENST00000507302 FAM50AQ14320 339 aaKnown RBP25.56■■□□□ 1.68
SNF8-205ENST00000507302 CDK12Q9NYV4 1490 aaPredicted RBP25.55■■□□□ 1.68
SNF8-205ENST00000507302 UPF1Q92900 1129 aaKnown RBP eCLIP25.55■■□□□ 1.68
SNF8-205ENST00000507302 SETBP1Q9Y6X0 1596 aa25.54■■□□□ 1.68
SNF8-205ENST00000507302 NHSL1Q5SYE7 1610 aa25.53■■□□□ 1.68
SNF8-205ENST00000507302 ATF3P18847 181 aa25.53■■□□□ 1.68
SNF8-205ENST00000507302 BRINP3Q76B58 766 aa25.53■■□□□ 1.68
SNF8-205ENST00000507302 SETD5Q9C0A6 1442 aa25.52■■□□□ 1.68
SNF8-205ENST00000507302 AMOTL2Q9Y2J4 779 aa25.51■■□□□ 1.67
SNF8-205ENST00000507302 ASXL1Q8IXJ9 1541 aa25.51■■□□□ 1.67
SNF8-205ENST00000507302 NUTM2DQ5VT03 806 aaPredicted RBP25.5■■□□□ 1.67
SNF8-205ENST00000507302 C14orf37Q86TY3 774 aa25.5■■□□□ 1.67
SNF8-205ENST00000507302 MST1RQ04912 1400 aa25.48■■□□□ 1.67
SNF8-205ENST00000507302 CHGAP10645 457 aaKnown RBP25.48■■□□□ 1.67
SNF8-205ENST00000507302 MEX3CQ5U5Q3 659 aaKnown RBP25.47■■□□□ 1.67
SNF8-205ENST00000507302 SPHKAPQ2M3C7 1700 aa25.45■■□□□ 1.66
SNF8-205ENST00000507302 RXRBP28702 533 aa25.44■■□□□ 1.66
SNF8-205ENST00000507302 NUP155O75694 1391 aa25.43■■□□□ 1.66
SNF8-205ENST00000507302 TRIM52Q96A61 297 aa25.42■■□□□ 1.66
SNF8-205ENST00000507302 LAMC1P11047 1609 aa25.41■■□□□ 1.66
SNF8-205ENST00000507302 ADGRL3Q9HAR2 1447 aa25.39■■□□□ 1.66
SNF8-205ENST00000507302 NALCNQ8IZF0 1738 aa25.39■■□□□ 1.65
SNF8-205ENST00000507302 METP08581 1390 aa25.39■■□□□ 1.65
SNF8-205ENST00000507302 AFF2P51816 1311 aa25.37■■□□□ 1.65
SNF8-205ENST00000507302 NEXMIFQ5QGS0 1516 aa25.37■■□□□ 1.65
SNF8-205ENST00000507302 LRRC59Q96AG4 307 aaKnown RBP25.36■■□□□ 1.65
SNF8-205ENST00000507302 PNPLA6Q8IY17 1366 aa25.35■■□□□ 1.65
SNF8-205ENST00000507302 NUTM2BA6NNL0 878 aaPredicted RBP25.34■■□□□ 1.65
SNF8-205ENST00000507302 NUTM2EB1AL46 878 aaPredicted RBP25.34■■□□□ 1.65
SNF8-205ENST00000507302 NUTM2AQ8IVF1 878 aaPredicted RBP25.34■■□□□ 1.65
SNF8-205ENST00000507302 RGS12O14924 1447 aa25.32■■□□□ 1.64
SNF8-205ENST00000507302 CLTCL1P53675 1640 aa25.31■■□□□ 1.64
SNF8-205ENST00000507302 PRAG1Q86YV5 1406 aa25.3■■□□□ 1.64
SNF8-205ENST00000507302 RBM6P78332 1123 aaKnown RBP25.28■■□□□ 1.64
SNF8-205ENST00000507302 C1orf167Q5SNV9 1468 aa25.28■■□□□ 1.64
SNF8-205ENST00000507302 PTCH1Q13635 1447 aa25.27■■□□□ 1.64
SNF8-205ENST00000507302 QTRT2Q9H974 415 aaKnown RBP25.26■■□□□ 1.63
SNF8-205ENST00000507302 KIF1BO60333 1816 aa25.26■■□□□ 1.63
SNF8-205ENST00000507302 DDX17Q92841 729 aaKnown RBP25.25■■□□□ 1.63
SNF8-205ENST00000507302 SOS2Q07890 1332 aaPredicted RBP25.24■■□□□ 1.63
SNF8-205ENST00000507302 ZNF326Q5BKZ1 582 aaKnown RBP25.23■■□□□ 1.63
SNF8-205ENST00000507302 C8orf37Q96NL8 207 aa25.23■■□□□ 1.63
SNF8-205ENST00000507302 COL22A1Q8NFW1 1626 aaPredicted RBP25.23■■□□□ 1.63
SNF8-205ENST00000507302 SRCAPQ6ZRS2 3230 aa25.21■■□□□ 1.63
SNF8-205ENST00000507302 ROBO2Q9HCK4 1378 aa25.18■■□□□ 1.62
SNF8-205ENST00000507302 FNBP4Q8N3X1 1017 aaPredicted RBP25.16■■□□□ 1.62
SNF8-205ENST00000507302 NGLY1Q96IV0 654 aa25.15■■□□□ 1.62
SNF8-205ENST00000507302 ORAI2Q96SN7 254 aa25.14■■□□□ 1.62
SNF8-205ENST00000507302 ATRNO75882 1429 aa25.13■■□□□ 1.61
SNF8-205ENST00000507302 ITGAEP38570 1179 aa25.13■■□□□ 1.61
SNF8-205ENST00000507302 PPLO60437 1756 aa25.13■■□□□ 1.61
SNF8-205ENST00000507302 HFM1A2PYH4 1435 aa25.12■■□□□ 1.61
SNF8-205ENST00000507302 EP400Q96L91 3159 aa25.12■■□□□ 1.61
SNF8-205ENST00000507302 VGFO15240 615 aaPredicted RBP25.12■■□□□ 1.61
SNF8-205ENST00000507302 ATAD2Q6PL18 1390 aa25.12■■□□□ 1.61
SNF8-205ENST00000507302 MYOM2P54296 1465 aa25.12■■□□□ 1.61
SNF8-205ENST00000507302 MARF1Q9Y4F3 1742 aaKnown RBP25.12■■□□□ 1.61
SNF8-205ENST00000507302 NAIPQ13075 1403 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms