RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ZFYVE9O95405 1425 aa20.45■□□□□ 0.86
RNF4-208ENST00000507247 SLIT1O75093 1534 aa20.45■□□□□ 0.86
RNF4-208ENST00000507247 DCAF11Q8TEB1 546 aa20.45■□□□□ 0.86
RNF4-208ENST00000507247 RIMS2Q9UQ26 1411 aa20.44■□□□□ 0.86
RNF4-208ENST00000507247 ARHGAP23Q9P227 1491 aa20.44■□□□□ 0.86
RNF4-208ENST00000507247 RPGRIP1LQ68CZ1 1315 aa20.44■□□□□ 0.86
RNF4-208ENST00000507247 TMEM2Q9UHN6 1383 aa20.44■□□□□ 0.86
RNF4-208ENST00000507247 MYOM2P54296 1465 aa20.43■□□□□ 0.86
RNF4-208ENST00000507247 ZEB1P37275 1124 aaPredicted RBP20.43■□□□□ 0.86
RNF4-208ENST00000507247 KDM2AQ9Y2K7 1162 aa20.43■□□□□ 0.86
RNF4-208ENST00000507247 PPP1R15AO75807 674 aaPredicted RBP20.41■□□□□ 0.86
RNF4-208ENST00000507247 NUTM2DQ5VT03 806 aaPredicted RBP20.41■□□□□ 0.86
RNF4-208ENST00000507247 THEMISQ8N1K5 641 aaPredicted RBP20.41■□□□□ 0.86
RNF4-208ENST00000507247 NRXN1Q9ULB1 1477 aa20.4■□□□□ 0.86
RNF4-208ENST00000507247 PRAG1Q86YV5 1406 aa20.39■□□□□ 0.85
RNF4-208ENST00000507247 ADGRF5Q8IZF2 1346 aa20.39■□□□□ 0.85
RNF4-208ENST00000507247 STRCQ7RTU9 1775 aa20.39■□□□□ 0.85
RNF4-208ENST00000507247 NBPF8Q3BBV2 869 aa20.38■□□□□ 0.85
RNF4-208ENST00000507247 POLR1AO95602 1720 aaPredicted RBP20.37■□□□□ 0.85
RNF4-208ENST00000507247 TRPM1Q7Z4N2 1603 aa20.36■□□□□ 0.85
RNF4-208ENST00000507247 LTKP29376 864 aa20.36■□□□□ 0.85
RNF4-208ENST00000507247 PIK3C2GO75747 1445 aa20.36■□□□□ 0.85
RNF4-208ENST00000507247 NRXN3Q9Y4C0 1643 aa20.35■□□□□ 0.85
RNF4-208ENST00000507247 STAC3Q96MF2 364 aa20.35■□□□□ 0.85
RNF4-208ENST00000507247 SCAF11Q99590 1463 aaKnown RBP20.35■□□□□ 0.85
RNF4-208ENST00000507247 IQGAP1P46940 1657 aa20.35■□□□□ 0.85
RNF4-208ENST00000507247 VGFO15240 615 aaPredicted RBP20.34■□□□□ 0.85
RNF4-208ENST00000507247 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.34■□□□□ 0.85
RNF4-208ENST00000507247 TXNDC2Q86VQ3 553 aa20.33■□□□□ 0.85
RNF4-208ENST00000507247 KIAA1210Q9ULL0 1709 aa20.33■□□□□ 0.84
RNF4-208ENST00000507247 SETD1AO15047 1707 aaKnown RBP20.32■□□□□ 0.84
RNF4-208ENST00000507247 SETBP1Q9Y6X0 1596 aa20.31■□□□□ 0.84
RNF4-208ENST00000507247 HDGFP51858 240 aaKnown RBP20.31■□□□□ 0.84
RNF4-208ENST00000507247 SENP3Q9H4L4 574 aaPredicted RBP20.31■□□□□ 0.84
RNF4-208ENST00000507247 EID1Q9Y6B2 187 aa20.31■□□□□ 0.84
RNF4-208ENST00000507247 LAMC1P11047 1609 aa20.3■□□□□ 0.84
RNF4-208ENST00000507247 PLEKHG1Q9ULL1 1385 aa20.3■□□□□ 0.84
RNF4-208ENST00000507247 RALGAPBQ86X10 1494 aa20.3■□□□□ 0.84
RNF4-208ENST00000507247 FBXO41Q8TF61 875 aa20.29■□□□□ 0.84
RNF4-208ENST00000507247 ALKQ9UM73 1620 aa20.28■□□□□ 0.84
RNF4-208ENST00000507247 ANKLE2Q86XL3 938 aa20.28■□□□□ 0.84
RNF4-208ENST00000507247 NCKAP5LQ9HCH0 1330 aa20.27■□□□□ 0.83
RNF4-208ENST00000507247 MED14O60244 1454 aa20.26■□□□□ 0.83
RNF4-208ENST00000507247 CFAP70Q5T0N1 1121 aa20.26■□□□□ 0.83
RNF4-208ENST00000507247 ASXL1Q8IXJ9 1541 aa20.26■□□□□ 0.83
RNF4-208ENST00000507247 ADAMTS13Q76LX8 1427 aa20.26■□□□□ 0.83
RNF4-208ENST00000507247 C14orf93Q9H972 538 aaKnown RBP20.25■□□□□ 0.83
RNF4-208ENST00000507247 NBPF1Q3BBV0 1214 aa20.24■□□□□ 0.83
RNF4-208ENST00000507247 NPHP4O75161 1426 aaPredicted RBP20.24■□□□□ 0.83
RNF4-208ENST00000507247 ADGRB1O14514 1584 aa20.24■□□□□ 0.83
RNF4-208ENST00000507247 DIP2AQ14689 1571 aa20.22■□□□□ 0.83
RNF4-208ENST00000507247 ROCK2O75116 1388 aaKnown RBP20.21■□□□□ 0.83
RNF4-208ENST00000507247 GPRASP1Q5JY77 1395 aa20.21■□□□□ 0.83
RNF4-208ENST00000507247 CERKQ8TCT0 537 aa20.2■□□□□ 0.82
RNF4-208ENST00000507247 BCANQ96GW7 911 aa20.2■□□□□ 0.82
RNF4-208ENST00000507247 TMEM132EQ6IEE7 984 aa20.18■□□□□ 0.82
RNF4-208ENST00000507247 SLC26A8Q96RN1 970 aa20.18■□□□□ 0.82
RNF4-208ENST00000507247 METP08581 1390 aa20.18■□□□□ 0.82
RNF4-208ENST00000507247 DMRT2Q9Y5R5 561 aa20.16■□□□□ 0.82
RNF4-208ENST00000507247 CARD11Q9BXL7 1154 aa20.15■□□□□ 0.82
RNF4-208ENST00000507247 TBX22Q9Y458 520 aa20.15■□□□□ 0.82
RNF4-208ENST00000507247 CHD2O14647 1828 aaKnown RBP20.13■□□□□ 0.81
RNF4-208ENST00000507247 KNDC1Q76NI1 1749 aa20.13■□□□□ 0.81
RNF4-208ENST00000507247 ARHGEF28Q8N1W1 1705 aaKnown RBP20.13■□□□□ 0.81
RNF4-208ENST00000507247 PTPRUQ92729 1446 aa20.13■□□□□ 0.81
RNF4-208ENST00000507247 YTHDC2Q9H6S0 1430 aaKnown RBP20.12■□□□□ 0.81
RNF4-208ENST00000507247 XRN1Q8IZH2 1706 aaKnown RBP20.12■□□□□ 0.81
RNF4-208ENST00000507247 LRPPRCP42704 1394 aaKnown RBP20.1■□□□□ 0.81
RNF4-208ENST00000507247 USP47Q96K76 1375 aa20.09■□□□□ 0.81
RNF4-208ENST00000507247 LTBP4Q8N2S1 1624 aa20.09■□□□□ 0.81
RNF4-208ENST00000507247 PIK3R4Q99570 1358 aa20.08■□□□□ 0.81
RNF4-208ENST00000507247 CPS1P31327 1500 aa20.08■□□□□ 0.81
RNF4-208ENST00000507247 STRCP1A6NGW2 1772 aa20.08■□□□□ 0.8
RNF4-208ENST00000507247 NWD1Q149M9 1564 aa20.08■□□□□ 0.8
RNF4-208ENST00000507247 DLC1Q96QB1 1528 aa20.07■□□□□ 0.8
RNF4-208ENST00000507247 STK26Q9P289 416 aa20.07■□□□□ 0.8
RNF4-208ENST00000507247 TRAK1Q9UPV9 953 aa20.07■□□□□ 0.8
RNF4-208ENST00000507247 TECPR2O15040 1411 aa20.07■□□□□ 0.8
RNF4-208ENST00000507247 ABCC11Q96J66 1382 aa20.06■□□□□ 0.8
RNF4-208ENST00000507247 HSPA5P11021 654 aaKnown RBP20.05■□□□□ 0.8
RNF4-208ENST00000507247 EIF4G2P78344 907 aaKnown RBP eCLIP20.04■□□□□ 0.8
RNF4-208ENST00000507247 AMOTL2Q9Y2J4 779 aa20.04■□□□□ 0.8
RNF4-208ENST00000507247 QRICH2Q9H0J4 1663 aa20.03■□□□□ 0.8
RNF4-208ENST00000507247 HIRIP3Q9BW71 556 aaPredicted RBP20.02■□□□□ 0.8
RNF4-208ENST00000507247 EIF3AQ14152 1382 aaKnown RBP20.02■□□□□ 0.8
RNF4-208ENST00000507247 PTCH1Q13635 1447 aa20.02■□□□□ 0.79
RNF4-208ENST00000507247 ROBO2Q9HCK4 1378 aa20.01■□□□□ 0.79
RNF4-208ENST00000507247 ST20-MTHFSA0A0A6YYL1 179 aa20.01■□□□□ 0.79
RNF4-208ENST00000507247 ZNF335Q9H4Z2 1342 aaPredicted RBP20.01■□□□□ 0.79
RNF4-208ENST00000507247 PLEKHH1Q9ULM0 1364 aa20■□□□□ 0.79
RNF4-208ENST00000507247 KCNA6P17658 529 aa20■□□□□ 0.79
RNF4-208ENST00000507247 FAM135BQ49AJ0 1406 aa19.99■□□□□ 0.79
RNF4-208ENST00000507247 PRAM1Q96QH2 718 aa19.98■□□□□ 0.79
RNF4-208ENST00000507247 CENPJQ9HC77 1338 aaPredicted RBP19.98■□□□□ 0.79
RNF4-208ENST00000507247 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.97■□□□□ 0.79
RNF4-208ENST00000507247 WAPLQ7Z5K2 1190 aa19.97■□□□□ 0.79
RNF4-208ENST00000507247 SIRT1Q96EB6 747 aa19.97■□□□□ 0.79
RNF4-208ENST00000507247 NKTRP30414 1462 aaKnown RBP19.97■□□□□ 0.79
RNF4-208ENST00000507247 SAFB2Q14151 953 aaKnown RBP eCLIP19.95■□□□□ 0.78
RNF4-208ENST00000507247 TESK2Q96S53 571 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms