RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 HDGFP51858 240 aaKnown RBP8.18□□□□□ -1.1
CDC42SE2-210ENST00000506929 SWT1Q5T5J6 900 aaKnown RBP8.18□□□□□ -1.1
CDC42SE2-210ENST00000506929 RBM46Q8TBY0 533 aaKnown RBP8.18□□□□□ -1.1
CDC42SE2-210ENST00000506929 OATP04181 439 aa8.17□□□□□ -1.1
CDC42SE2-210ENST00000506929 AK7Q96M32 723 aa8.17□□□□□ -1.1
CDC42SE2-210ENST00000506929 MDM2Q00987 491 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE2-210ENST00000506929 NYAP1Q6ZVC0 841 aa8.16□□□□□ -1.1
CDC42SE2-210ENST00000506929 TMEM134Q9H6X4 195 aa8.15□□□□□ -1.1
CDC42SE2-210ENST00000506929 WBP1LQ9NX94 342 aa8.15□□□□□ -1.1
CDC42SE2-210ENST00000506929 TSR3Q9UJK0 312 aaKnown RBP8.15□□□□□ -1.1
CDC42SE2-210ENST00000506929 HPS5Q9UPZ3 1129 aa8.15□□□□□ -1.1
CDC42SE2-210ENST00000506929 DNAJB2P25686 324 aa8.14□□□□□ -1.11
CDC42SE2-210ENST00000506929 SLC4A3P48751 1232 aa8.13□□□□□ -1.11
CDC42SE2-210ENST00000506929 PDE4DQ08499 809 aa8.13□□□□□ -1.11
CDC42SE2-210ENST00000506929 TMUB1Q9BVT8 246 aa8.13□□□□□ -1.11
CDC42SE2-210ENST00000506929 GPBP1L1Q9HC44 474 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE2-210ENST00000506929 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.12□□□□□ -1.11
CDC42SE2-210ENST00000506929 SLC10A3P09131 477 aa8.12□□□□□ -1.11
CDC42SE2-210ENST00000506929 PPP4CP60510 307 aa8.12□□□□□ -1.11
CDC42SE2-210ENST00000506929 PARP9Q8IXQ6 854 aa8.12□□□□□ -1.11
CDC42SE2-210ENST00000506929 PLA2G2EQ9NZK7 142 aa8.12□□□□□ -1.11
CDC42SE2-210ENST00000506929 RNF40O75150 1001 aa8.11□□□□□ -1.11
CDC42SE2-210ENST00000506929 NECTIN2Q92692 538 aa8.11□□□□□ -1.11
CDC42SE2-210ENST00000506929 AMHR2Q16671 573 aa8.1□□□□□ -1.11
CDC42SE2-210ENST00000506929 SLF2Q8IX21 1173 aa8.1□□□□□ -1.11
CDC42SE2-210ENST00000506929 DDX11L8A8MPP1 907 aa8.09□□□□□ -1.11
CDC42SE2-210ENST00000506929 TTLL12Q14166 644 aaPredicted RBP8.09□□□□□ -1.11
CDC42SE2-210ENST00000506929 DAXXQ9UER7 740 aaPredicted RBP8.09□□□□□ -1.11
CDC42SE2-210ENST00000506929 MS4A1P11836 297 aa8.08□□□□□ -1.12
CDC42SE2-210ENST00000506929 GIGYF2Q6Y7W6 1299 aaKnown RBP8.08□□□□□ -1.12
CDC42SE2-210ENST00000506929 BRPF1P55201 1214 aaPredicted RBP8.07□□□□□ -1.12
CDC42SE2-210ENST00000506929 IFFO2Q5TF58 517 aa8.07□□□□□ -1.12
CDC42SE2-210ENST00000506929 GPCPD1Q9NPB8 672 aa8.07□□□□□ -1.12
CDC42SE2-210ENST00000506929 FAM217BQ9NTX9 383 aaPredicted RBP8.06□□□□□ -1.12
CDC42SE2-210ENST00000506929 ITGBL1O95965 494 aaPredicted RBP8.05□□□□□ -1.12
CDC42SE2-210ENST00000506929 SSTR3P32745 418 aaPredicted RBP8.05□□□□□ -1.12
CDC42SE2-210ENST00000506929 CLCN1P35523 988 aa8.05□□□□□ -1.12
CDC42SE2-210ENST00000506929 APLP1P51693 650 aa8.05□□□□□ -1.12
CDC42SE2-210ENST00000506929 NEUROD2Q15784 382 aa8.04□□□□□ -1.12
CDC42SE2-210ENST00000506929 RDH13Q8NBN7 331 aa8.04□□□□□ -1.12
CDC42SE2-210ENST00000506929 KDM4CQ9H3R0 1056 aa8.04□□□□□ -1.12
CDC42SE2-210ENST00000506929 CD46P15529 392 aa8.03□□□□□ -1.12
CDC42SE2-210ENST00000506929 PRR14Q9BWN1 585 aa8.03□□□□□ -1.12
CDC42SE2-210ENST00000506929 CFHP08603 1231 aa8.02□□□□□ -1.13
CDC42SE2-210ENST00000506929 RSPH4AQ5TD94 716 aa8.02□□□□□ -1.13
CDC42SE2-210ENST00000506929 FAM117AQ9C073 453 aa8.02□□□□□ -1.13
CDC42SE2-210ENST00000506929 KCNC4Q03721 635 aa8.01□□□□□ -1.13
CDC42SE2-210ENST00000506929 HLA-CQ95604 372 aa8.01□□□□□ -1.13
CDC42SE2-210ENST00000506929 TJAP1Q5JTD0 557 aa8□□□□□ -1.13
CDC42SE2-210ENST00000506929 BEGAINQ9BUH8 593 aa8□□□□□ -1.13
CDC42SE2-210ENST00000506929 GCGRP47871 477 aa7.99□□□□□ -1.13
CDC42SE2-210ENST00000506929 PUS10Q3MIT2 529 aaKnown RBP7.99□□□□□ -1.13
CDC42SE2-210ENST00000506929 KMT5BQ4FZB7 885 aa7.99□□□□□ -1.13
CDC42SE2-210ENST00000506929 PLEKHG3A1L390 1219 aa7.98□□□□□ -1.13
CDC42SE2-210ENST00000506929 MTRQ99707 1265 aa7.98□□□□□ -1.13
CDC42SE2-210ENST00000506929 IL21Q9HBE4 155 aa7.98□□□□□ -1.13
CDC42SE2-210ENST00000506929 GUCA2AQ02747 115 aa7.97□□□□□ -1.13
CDC42SE2-210ENST00000506929 FUT2Q10981 343 aa7.97□□□□□ -1.13
CDC42SE2-210ENST00000506929 SULF1Q8IWU6 871 aa7.97□□□□□ -1.13
CDC42SE2-210ENST00000506929 PCDHB3Q9Y5E6 796 aa7.97□□□□□ -1.13
CDC42SE2-210ENST00000506929 A0A0G2JS52 829 aa7.96□□□□□ -1.14
CDC42SE2-210ENST00000506929 COPS2P61201 443 aa7.96□□□□□ -1.14
CDC42SE2-210ENST00000506929 IL27Q8NEV9 243 aa7.96□□□□□ -1.14
CDC42SE2-210ENST00000506929 SPIRE2Q8WWL2 714 aa7.96□□□□□ -1.14
CDC42SE2-210ENST00000506929 ACTN4O43707 911 aaKnown RBP7.95□□□□□ -1.14
CDC42SE2-210ENST00000506929 NDUFV2P19404 249 aa7.95□□□□□ -1.14
CDC42SE2-210ENST00000506929 BLOC1S3Q6QNY0 202 aa7.95□□□□□ -1.14
CDC42SE2-210ENST00000506929 ZNF516Q92618 1163 aa7.95□□□□□ -1.14
CDC42SE2-210ENST00000506929 KDM4AO75164 1064 aa7.93□□□□□ -1.14
CDC42SE2-210ENST00000506929 TBC1D2Q9BYX2 928 aa7.93□□□□□ -1.14
CDC42SE2-210ENST00000506929 MOXD2PA6NHM9 499 aa7.92□□□□□ -1.14
CDC42SE2-210ENST00000506929 RGS20O76081 388 aa7.92□□□□□ -1.14
CDC42SE2-210ENST00000506929 NKX2-3Q8TAU0 364 aa7.92□□□□□ -1.14
CDC42SE2-210ENST00000506929 TLL1O43897 1013 aa7.91□□□□□ -1.14
CDC42SE2-210ENST00000506929 ZPR1O75312 459 aa7.91□□□□□ -1.14
CDC42SE2-210ENST00000506929 MORN1Q5T089 497 aa7.91□□□□□ -1.14
CDC42SE2-210ENST00000506929 FBXO31Q5XUX0 539 aaPredicted RBP7.91□□□□□ -1.14
CDC42SE2-210ENST00000506929 PCDHGC3Q9UN70 934 aa7.91□□□□□ -1.14
CDC42SE2-210ENST00000506929 HOXA2O43364 376 aa7.9□□□□□ -1.14
CDC42SE2-210ENST00000506929 NR1I2O75469 434 aa7.9□□□□□ -1.14
CDC42SE2-210ENST00000506929 NUTM1Q86Y26 1132 aa7.9□□□□□ -1.14
CDC42SE2-210ENST00000506929 SYMPKQ92797 1274 aaKnown RBP7.9□□□□□ -1.14
CDC42SE2-210ENST00000506929 POLR3EQ9NVU0 708 aa7.9□□□□□ -1.14
CDC42SE2-210ENST00000506929 LIMD1Q9UGP4 676 aa7.9□□□□□ -1.14
CDC42SE2-210ENST00000506929 SLC27A5Q9Y2P5 690 aa7.9□□□□□ -1.14
CDC42SE2-210ENST00000506929 PCDHB15Q9Y5E8 787 aa7.9□□□□□ -1.14
CDC42SE2-210ENST00000506929 ATP6V1AP38606 617 aa7.89□□□□□ -1.15
CDC42SE2-210ENST00000506929 MYSM1Q5VVJ2 828 aa7.89□□□□□ -1.15
CDC42SE2-210ENST00000506929 RNF19BQ6ZMZ0 732 aa7.88□□□□□ -1.15
CDC42SE2-210ENST00000506929 SCUBE3Q8IX30 993 aa7.88□□□□□ -1.15
CDC42SE2-210ENST00000506929 PROCA1Q8NCQ7 364 aaPredicted RBP7.88□□□□□ -1.15
CDC42SE2-210ENST00000506929 CSPP1Q1MSJ5 1256 aa7.87□□□□□ -1.15
CDC42SE2-210ENST00000506929 RSBN1LQ6PCB5 846 aaPredicted RBP7.86□□□□□ -1.15
CDC42SE2-210ENST00000506929 RIC3Q7Z5B4 369 aa7.86□□□□□ -1.15
CDC42SE2-210ENST00000506929 FDX1P10109 184 aa7.85□□□□□ -1.15
CDC42SE2-210ENST00000506929 GGCXP38435 758 aa7.85□□□□□ -1.15
CDC42SE2-210ENST00000506929 GRIPAP1Q4V328 841 aa7.85□□□□□ -1.15
CDC42SE2-210ENST00000506929 CABLES1Q8TDN4 633 aa7.85□□□□□ -1.15
CDC42SE2-210ENST00000506929 THAP11Q96EK4 314 aa7.85□□□□□ -1.15
CDC42SE2-210ENST00000506929 DDRGK1Q96HY6 314 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms