RNA–Protein interactions for RNA: ENST00000506836.5

LINC01948-201, Transcript of long intergenic non-protein coding RNA 1948, humanhuman

TSL 2 BASIC

Gene LINC01948, Length 656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01948-201ENST00000506836 STRCP1A6NGW2 1772 aa12.7□□□□□ -0.38
LINC01948-201ENST00000506836 FAM135BQ49AJ0 1406 aa12.7□□□□□ -0.38
LINC01948-201ENST00000506836 PPP1R15AO75807 674 aaPredicted RBP12.69□□□□□ -0.38
LINC01948-201ENST00000506836 BCANQ96GW7 911 aa12.69□□□□□ -0.38
LINC01948-201ENST00000506836 PLEKHG1Q9ULL1 1385 aa12.69□□□□□ -0.38
LINC01948-201ENST00000506836 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC01948-201ENST00000506836 MSH6P52701 1360 aa12.68□□□□□ -0.38
LINC01948-201ENST00000506836 TET3O43151 1660 aa12.67□□□□□ -0.38
LINC01948-201ENST00000506836 PROSER2Q86WR7 435 aaPredicted RBP12.67□□□□□ -0.38
LINC01948-201ENST00000506836 SLC26A8Q96RN1 970 aa12.67□□□□□ -0.38
LINC01948-201ENST00000506836 ZFYVE9O95405 1425 aa12.67□□□□□ -0.38
LINC01948-201ENST00000506836 NWD1Q149M9 1564 aa12.67□□□□□ -0.38
LINC01948-201ENST00000506836 UNC13BO14795 1591 aa12.66□□□□□ -0.38
LINC01948-201ENST00000506836 RIMS2Q9UQ26 1411 aa12.66□□□□□ -0.38
LINC01948-201ENST00000506836 NCOA3Q9Y6Q9 1424 aa12.63□□□□□ -0.39
LINC01948-201ENST00000506836 PIK3R4Q99570 1358 aa12.63□□□□□ -0.39
LINC01948-201ENST00000506836 CFAP65Q6ZU64 1925 aaKnown RBP12.62□□□□□ -0.39
LINC01948-201ENST00000506836 GCC2Q8IWJ2 1684 aa12.62□□□□□ -0.39
LINC01948-201ENST00000506836 DIP2AQ14689 1571 aa12.62□□□□□ -0.39
LINC01948-201ENST00000506836 CHGAP10645 457 aaKnown RBP12.62□□□□□ -0.39
LINC01948-201ENST00000506836 TBX22Q9Y458 520 aa12.62□□□□□ -0.39
LINC01948-201ENST00000506836 NUP155O75694 1391 aa12.61□□□□□ -0.39
LINC01948-201ENST00000506836 TMEM131LA2VDJ0 1609 aa12.6□□□□□ -0.39
LINC01948-201ENST00000506836 IQGAP3Q86VI3 1631 aa12.6□□□□□ -0.39
LINC01948-201ENST00000506836 C14orf37Q86TY3 774 aa12.59□□□□□ -0.39
LINC01948-201ENST00000506836 SLAIN2Q9P270 581 aa12.58□□□□□ -0.4
LINC01948-201ENST00000506836 XIRP1Q702N8 1843 aaKnown RBP12.58□□□□□ -0.4
LINC01948-201ENST00000506836 ROBO1Q9Y6N7 1651 aa12.57□□□□□ -0.4
LINC01948-201ENST00000506836 JCADQ9P266 1359 aa12.57□□□□□ -0.4
LINC01948-201ENST00000506836 ADAMTS13Q76LX8 1427 aa12.57□□□□□ -0.4
LINC01948-201ENST00000506836 CADPS2Q86UW7 1296 aa12.57□□□□□ -0.4
LINC01948-201ENST00000506836 RBM33Q96EV2 1170 aaKnown RBP12.57□□□□□ -0.4
LINC01948-201ENST00000506836 TRPM2O94759 1503 aa12.57□□□□□ -0.4
LINC01948-201ENST00000506836 ITGAEP38570 1179 aa12.56□□□□□ -0.4
LINC01948-201ENST00000506836 E9PCH4 1651 aa12.55□□□□□ -0.4
LINC01948-201ENST00000506836 ATF3P18847 181 aa12.55□□□□□ -0.4
LINC01948-201ENST00000506836 C19orf44Q9H6X5 657 aa12.54□□□□□ -0.4
LINC01948-201ENST00000506836 DCCP43146 1447 aa12.54□□□□□ -0.4
LINC01948-201ENST00000506836 NUTM2DQ5VT03 806 aaPredicted RBP12.52□□□□□ -0.41
LINC01948-201ENST00000506836 RGS17Q9UGC6 210 aaPredicted RBP12.52□□□□□ -0.41
LINC01948-201ENST00000506836 SPATA31A6Q5VVP1 1343 aa12.52□□□□□ -0.41
LINC01948-201ENST00000506836 ZNF326Q5BKZ1 582 aaKnown RBP12.51□□□□□ -0.41
LINC01948-201ENST00000506836 AMOTL2Q9Y2J4 779 aa12.51□□□□□ -0.41
LINC01948-201ENST00000506836 RRBP1Q9P2E9 1410 aaKnown RBP12.51□□□□□ -0.41
LINC01948-201ENST00000506836 SETBP1Q9Y6X0 1596 aa12.51□□□□□ -0.41
LINC01948-201ENST00000506836 CHD2O14647 1828 aaKnown RBP12.51□□□□□ -0.41
LINC01948-201ENST00000506836 PHLPP1O60346 1717 aa12.49□□□□□ -0.41
LINC01948-201ENST00000506836 AHDC1Q5TGY3 1603 aaPredicted RBP12.49□□□□□ -0.41
LINC01948-201ENST00000506836 MEX3CQ5U5Q3 659 aaKnown RBP12.48□□□□□ -0.41
LINC01948-201ENST00000506836 COL16A1Q07092 1604 aaPredicted RBP12.48□□□□□ -0.41
LINC01948-201ENST00000506836 PTPRUQ92729 1446 aa12.47□□□□□ -0.41
LINC01948-201ENST00000506836 MYO5BQ9ULV0 1848 aa12.47□□□□□ -0.41
LINC01948-201ENST00000506836 POTEAQ6S8J7 498 aa12.47□□□□□ -0.41
LINC01948-201ENST00000506836 NAIPQ13075 1403 aa12.46□□□□□ -0.41
LINC01948-201ENST00000506836 SPHKAPQ2M3C7 1700 aa12.46□□□□□ -0.41
LINC01948-201ENST00000506836 ZNF772Q68DY9 489 aaPredicted RBP12.46□□□□□ -0.41
LINC01948-201ENST00000506836 BRINP3Q76B58 766 aa12.45□□□□□ -0.42
LINC01948-201ENST00000506836 PPARGC1BQ86YN6 1023 aaKnown RBP12.45□□□□□ -0.42
LINC01948-201ENST00000506836 XRN1Q8IZH2 1706 aaKnown RBP12.45□□□□□ -0.42
LINC01948-201ENST00000506836 HFM1A2PYH4 1435 aa12.45□□□□□ -0.42
LINC01948-201ENST00000506836 ADGRL3Q9HAR2 1447 aa12.45□□□□□ -0.42
LINC01948-201ENST00000506836 ASXL1Q8IXJ9 1541 aa12.44□□□□□ -0.42
LINC01948-201ENST00000506836 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.44□□□□□ -0.42
LINC01948-201ENST00000506836 PTCH1Q13635 1447 aa12.44□□□□□ -0.42
LINC01948-201ENST00000506836 METP08581 1390 aa12.43□□□□□ -0.42
LINC01948-201ENST00000506836 NEXMIFQ5QGS0 1516 aa12.43□□□□□ -0.42
LINC01948-201ENST00000506836 VGFO15240 615 aaPredicted RBP12.43□□□□□ -0.42
LINC01948-201ENST00000506836 NRXN3Q9Y4C0 1643 aa12.43□□□□□ -0.42
LINC01948-201ENST00000506836 MST1RQ04912 1400 aa12.43□□□□□ -0.42
LINC01948-201ENST00000506836 RPGRIP1LQ68CZ1 1315 aa12.42□□□□□ -0.42
LINC01948-201ENST00000506836 LRP6O75581 1613 aa12.42□□□□□ -0.42
LINC01948-201ENST00000506836 CLTCL1P53675 1640 aa12.42□□□□□ -0.42
LINC01948-201ENST00000506836 SETD5Q9C0A6 1442 aa12.42□□□□□ -0.42
LINC01948-201ENST00000506836 SHPRHQ149N8 1683 aa12.42□□□□□ -0.42
LINC01948-201ENST00000506836 PRAG1Q86YV5 1406 aa12.41□□□□□ -0.42
LINC01948-201ENST00000506836 TRIM52Q96A61 297 aa12.41□□□□□ -0.42
LINC01948-201ENST00000506836 LRRC59Q96AG4 307 aaKnown RBP12.4□□□□□ -0.42
LINC01948-201ENST00000506836 SLC4A1APQ9BWU0 796 aaKnown RBP12.4□□□□□ -0.42
LINC01948-201ENST00000506836 NUTM2BA6NNL0 878 aaPredicted RBP12.37□□□□□ -0.43
LINC01948-201ENST00000506836 NUTM2EB1AL46 878 aaPredicted RBP12.37□□□□□ -0.43
LINC01948-201ENST00000506836 NUTM2AQ8IVF1 878 aaPredicted RBP12.37□□□□□ -0.43
LINC01948-201ENST00000506836 CDK12Q9NYV4 1490 aaPredicted RBP12.37□□□□□ -0.43
LINC01948-201ENST00000506836 ACIN1Q9UKV3 1341 aaKnown RBP12.37□□□□□ -0.43
LINC01948-201ENST00000506836 C1orf167Q5SNV9 1468 aa12.36□□□□□ -0.43
LINC01948-201ENST00000506836 RXRBP28702 533 aa12.36□□□□□ -0.43
LINC01948-201ENST00000506836 CCDC144AA2RUR9 1427 aa12.36□□□□□ -0.43
LINC01948-201ENST00000506836 PNPLA6Q8IY17 1366 aa12.35□□□□□ -0.43
LINC01948-201ENST00000506836 ROBO2Q9HCK4 1378 aa12.35□□□□□ -0.43
LINC01948-201ENST00000506836 NHSL1Q5SYE7 1610 aa12.35□□□□□ -0.43
LINC01948-201ENST00000506836 KIF1BO60333 1816 aa12.34□□□□□ -0.43
LINC01948-201ENST00000506836 AFF2P51816 1311 aa12.34□□□□□ -0.43
LINC01948-201ENST00000506836 ANKRD30BQ9BXX2 1392 aa12.33□□□□□ -0.44
LINC01948-201ENST00000506836 NALCNQ8IZF0 1738 aa12.33□□□□□ -0.44
LINC01948-201ENST00000506836 C8orf37Q96NL8 207 aa12.31□□□□□ -0.44
LINC01948-201ENST00000506836 SOS2Q07890 1332 aaPredicted RBP12.31□□□□□ -0.44
LINC01948-201ENST00000506836 NPHP3Q7Z494 1330 aa12.31□□□□□ -0.44
LINC01948-201ENST00000506836 CDC42BPGQ6DT37 1551 aa12.3□□□□□ -0.44
LINC01948-201ENST00000506836 RBM6P78332 1123 aaKnown RBP12.3□□□□□ -0.44
LINC01948-201ENST00000506836 LRPPRCP42704 1394 aaKnown RBP12.3□□□□□ -0.44
LINC01948-201ENST00000506836 LAMC1P11047 1609 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms