RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 NWD1Q149M9 1564 aa17.47■□□□□ 0.39
CCHCR1-220ENST00000506831 ZFYVE9O95405 1425 aa17.46■□□□□ 0.39
CCHCR1-220ENST00000506831 PLEKHG1Q9ULL1 1385 aa17.45■□□□□ 0.38
CCHCR1-220ENST00000506831 GCC2Q8IWJ2 1684 aa17.43■□□□□ 0.38
CCHCR1-220ENST00000506831 BCANQ96GW7 911 aa17.43■□□□□ 0.38
CCHCR1-220ENST00000506831 RGS17Q9UGC6 210 aaPredicted RBP17.43■□□□□ 0.38
CCHCR1-220ENST00000506831 MSH6P52701 1360 aa17.42■□□□□ 0.38
CCHCR1-220ENST00000506831 ROCK1Q13464 1354 aa17.42■□□□□ 0.38
CCHCR1-220ENST00000506831 UNC13BO14795 1591 aa17.42■□□□□ 0.38
CCHCR1-220ENST00000506831 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.42■□□□□ 0.38
CCHCR1-220ENST00000506831 TBX22Q9Y458 520 aa17.42■□□□□ 0.38
CCHCR1-220ENST00000506831 TMEM131LA2VDJ0 1609 aa17.42■□□□□ 0.38
CCHCR1-220ENST00000506831 CHD2O14647 1828 aaKnown RBP17.42■□□□□ 0.38
CCHCR1-220ENST00000506831 ROBO1Q9Y6N7 1651 aa17.42■□□□□ 0.38
CCHCR1-220ENST00000506831 RIMS2Q9UQ26 1411 aa17.41■□□□□ 0.38
CCHCR1-220ENST00000506831 NCOA3Q9Y6Q9 1424 aa17.41■□□□□ 0.38
CCHCR1-220ENST00000506831 MYO5BQ9ULV0 1848 aa17.41■□□□□ 0.38
CCHCR1-220ENST00000506831 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
CCHCR1-220ENST00000506831 RBM33Q96EV2 1170 aaKnown RBP17.39■□□□□ 0.37
CCHCR1-220ENST00000506831 SLAIN2Q9P270 581 aa17.39■□□□□ 0.37
CCHCR1-220ENST00000506831 PIK3R4Q99570 1358 aa17.38■□□□□ 0.37
CCHCR1-220ENST00000506831 E9PCH4 1651 aa17.36■□□□□ 0.37
CCHCR1-220ENST00000506831 IQGAP3Q86VI3 1631 aa17.36■□□□□ 0.37
CCHCR1-220ENST00000506831 CHGAP10645 457 aaKnown RBP17.34■□□□□ 0.37
CCHCR1-220ENST00000506831 DIP2AQ14689 1571 aa17.34■□□□□ 0.37
CCHCR1-220ENST00000506831 ADAMTS13Q76LX8 1427 aa17.34■□□□□ 0.37
CCHCR1-220ENST00000506831 JCADQ9P266 1359 aa17.33■□□□□ 0.36
CCHCR1-220ENST00000506831 NUP155O75694 1391 aa17.32■□□□□ 0.36
CCHCR1-220ENST00000506831 PHLPP1O60346 1717 aa17.32■□□□□ 0.36
CCHCR1-220ENST00000506831 POTEAQ6S8J7 498 aa17.31■□□□□ 0.36
CCHCR1-220ENST00000506831 CADPS2Q86UW7 1296 aa17.31■□□□□ 0.36
CCHCR1-220ENST00000506831 C19orf44Q9H6X5 657 aa17.31■□□□□ 0.36
CCHCR1-220ENST00000506831 C14orf37Q86TY3 774 aa17.28■□□□□ 0.36
CCHCR1-220ENST00000506831 TRPM2O94759 1503 aa17.27■□□□□ 0.36
CCHCR1-220ENST00000506831 NUTM2DQ5VT03 806 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-220ENST00000506831 COL16A1Q07092 1604 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-220ENST00000506831 SPATA31A6Q5VVP1 1343 aa17.26■□□□□ 0.35
CCHCR1-220ENST00000506831 ATF3P18847 181 aa17.26■□□□□ 0.35
CCHCR1-220ENST00000506831 AMOTL2Q9Y2J4 779 aa17.26■□□□□ 0.35
CCHCR1-220ENST00000506831 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.26■□□□□ 0.35
CCHCR1-220ENST00000506831 AHDC1Q5TGY3 1603 aaPredicted RBP17.25■□□□□ 0.35
CCHCR1-220ENST00000506831 DCCP43146 1447 aa17.23■□□□□ 0.35
CCHCR1-220ENST00000506831 PTPRUQ92729 1446 aa17.23■□□□□ 0.35
CCHCR1-220ENST00000506831 ITGAEP38570 1179 aa17.22■□□□□ 0.35
CCHCR1-220ENST00000506831 SETBP1Q9Y6X0 1596 aa17.22■□□□□ 0.35
CCHCR1-220ENST00000506831 SPHKAPQ2M3C7 1700 aa17.21■□□□□ 0.35
CCHCR1-220ENST00000506831 NRXN3Q9Y4C0 1643 aa17.2■□□□□ 0.34
CCHCR1-220ENST00000506831 SHPRHQ149N8 1683 aa17.2■□□□□ 0.34
CCHCR1-220ENST00000506831 ZNF772Q68DY9 489 aaPredicted RBP17.19■□□□□ 0.34
CCHCR1-220ENST00000506831 BRINP3Q76B58 766 aa17.19■□□□□ 0.34
CCHCR1-220ENST00000506831 XRN1Q8IZH2 1706 aaKnown RBP17.18■□□□□ 0.34
CCHCR1-220ENST00000506831 ZNF326Q5BKZ1 582 aaKnown RBP17.18■□□□□ 0.34
CCHCR1-220ENST00000506831 LRP6O75581 1613 aa17.17■□□□□ 0.34
CCHCR1-220ENST00000506831 MEX3CQ5U5Q3 659 aaKnown RBP17.16■□□□□ 0.34
CCHCR1-220ENST00000506831 METP08581 1390 aa17.15■□□□□ 0.34
CCHCR1-220ENST00000506831 SETD5Q9C0A6 1442 aa17.14■□□□□ 0.33
CCHCR1-220ENST00000506831 MST1RQ04912 1400 aa17.13■□□□□ 0.33
CCHCR1-220ENST00000506831 RRBP1Q9P2E9 1410 aaKnown RBP17.13■□□□□ 0.33
CCHCR1-220ENST00000506831 ASXL1Q8IXJ9 1541 aa17.13■□□□□ 0.33
CCHCR1-220ENST00000506831 NEXMIFQ5QGS0 1516 aa17.12■□□□□ 0.33
CCHCR1-220ENST00000506831 CLTCL1P53675 1640 aa17.12■□□□□ 0.33
CCHCR1-220ENST00000506831 PPARGC1BQ86YN6 1023 aaKnown RBP17.12■□□□□ 0.33
CCHCR1-220ENST00000506831 LRRC59Q96AG4 307 aaKnown RBP17.12■□□□□ 0.33
CCHCR1-220ENST00000506831 KIF1BO60333 1816 aa17.12■□□□□ 0.33
CCHCR1-220ENST00000506831 NAIPQ13075 1403 aa17.12■□□□□ 0.33
CCHCR1-220ENST00000506831 ADGRL3Q9HAR2 1447 aa17.12■□□□□ 0.33
CCHCR1-220ENST00000506831 NHSL1Q5SYE7 1610 aa17.1■□□□□ 0.33
CCHCR1-220ENST00000506831 VGFO15240 615 aaPredicted RBP17.1■□□□□ 0.33
CCHCR1-220ENST00000506831 SETD1AO15047 1707 aaKnown RBP17.1■□□□□ 0.33
CCHCR1-220ENST00000506831 RPGRIP1LQ68CZ1 1315 aa17.08■□□□□ 0.32
CCHCR1-220ENST00000506831 RXRBP28702 533 aa17.08■□□□□ 0.32
CCHCR1-220ENST00000506831 CDK12Q9NYV4 1490 aaPredicted RBP17.07■□□□□ 0.32
CCHCR1-220ENST00000506831 PTCH1Q13635 1447 aa17.06■□□□□ 0.32
CCHCR1-220ENST00000506831 PRAG1Q86YV5 1406 aa17.06■□□□□ 0.32
CCHCR1-220ENST00000506831 NUTM2BA6NNL0 878 aaPredicted RBP17.06■□□□□ 0.32
CCHCR1-220ENST00000506831 NUTM2EB1AL46 878 aaPredicted RBP17.06■□□□□ 0.32
CCHCR1-220ENST00000506831 NUTM2AQ8IVF1 878 aaPredicted RBP17.06■□□□□ 0.32
CCHCR1-220ENST00000506831 NALCNQ8IZF0 1738 aa17.05■□□□□ 0.32
CCHCR1-220ENST00000506831 UPF1Q92900 1129 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCHCR1-220ENST00000506831 HFM1A2PYH4 1435 aa17.04■□□□□ 0.32
CCHCR1-220ENST00000506831 TRIM52Q96A61 297 aa17.04■□□□□ 0.32
CCHCR1-220ENST00000506831 LAMC1P11047 1609 aa17.03■□□□□ 0.32
CCHCR1-220ENST00000506831 PNPLA6Q8IY17 1366 aa17.03■□□□□ 0.32
CCHCR1-220ENST00000506831 AFF2P51816 1311 aa17.03■□□□□ 0.32
CCHCR1-220ENST00000506831 C1orf167Q5SNV9 1468 aa17.03■□□□□ 0.32
CCHCR1-220ENST00000506831 SLC4A1APQ9BWU0 796 aaKnown RBP17.01■□□□□ 0.31
CCHCR1-220ENST00000506831 ROBO2Q9HCK4 1378 aa17.01■□□□□ 0.31
CCHCR1-220ENST00000506831 SOS2Q07890 1332 aaPredicted RBP17■□□□□ 0.31
CCHCR1-220ENST00000506831 DDX17Q92841 729 aaKnown RBP17■□□□□ 0.31
CCHCR1-220ENST00000506831 RBM6P78332 1123 aaKnown RBP16.99■□□□□ 0.31
CCHCR1-220ENST00000506831 PPLO60437 1756 aa16.98■□□□□ 0.31
CCHCR1-220ENST00000506831 C8orf37Q96NL8 207 aa16.97■□□□□ 0.31
CCHCR1-220ENST00000506831 ORAI2Q96SN7 254 aa16.97■□□□□ 0.31
CCHCR1-220ENST00000506831 QTRT2Q9H974 415 aaKnown RBP16.97■□□□□ 0.31
CCHCR1-220ENST00000506831 NGLY1Q96IV0 654 aa16.95■□□□□ 0.3
CCHCR1-220ENST00000506831 ADAMTS2O95450 1211 aa16.92■□□□□ 0.3
CCHCR1-220ENST00000506831 RGS12O14924 1447 aa16.92■□□□□ 0.3
CCHCR1-220ENST00000506831 NPHP3Q7Z494 1330 aa16.92■□□□□ 0.3
CCHCR1-220ENST00000506831 CDC42BPGQ6DT37 1551 aa16.91■□□□□ 0.3
CCHCR1-220ENST00000506831 CCDC144AA2RUR9 1427 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms