RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 NAIPQ13075 1403 aa25.57■■□□□ 1.68
PDLIM7-215ENST00000506161 SPHKAPQ2M3C7 1700 aa25.55■■□□□ 1.68
PDLIM7-215ENST00000506161 ZFYVE9O95405 1425 aa25.54■■□□□ 1.68
PDLIM7-215ENST00000506161 STAG3Q9UJ98 1225 aa25.54■■□□□ 1.68
PDLIM7-215ENST00000506161 SLC52A1Q9NWF4 448 aa25.52■■□□□ 1.68
PDLIM7-215ENST00000506161 SENP3Q9H4L4 574 aaPredicted RBP25.51■■□□□ 1.67
PDLIM7-215ENST00000506161 EID1Q9Y6B2 187 aa25.49■■□□□ 1.67
PDLIM7-215ENST00000506161 RIMS2Q9UQ26 1411 aa25.47■■□□□ 1.67
PDLIM7-215ENST00000506161 SLC26A8Q96RN1 970 aa25.46■■□□□ 1.67
PDLIM7-215ENST00000506161 HFM1A2PYH4 1435 aa25.45■■□□□ 1.66
PDLIM7-215ENST00000506161 CLTCL1P53675 1640 aa25.45■■□□□ 1.66
PDLIM7-215ENST00000506161 CHD2O14647 1828 aaKnown RBP25.44■■□□□ 1.66
PDLIM7-215ENST00000506161 NWD1Q149M9 1564 aa25.44■■□□□ 1.66
PDLIM7-215ENST00000506161 NUTM2DQ5VT03 806 aaPredicted RBP25.41■■□□□ 1.66
PDLIM7-215ENST00000506161 RGS17Q9UGC6 210 aaPredicted RBP25.41■■□□□ 1.66
PDLIM7-215ENST00000506161 CHGAP10645 457 aaKnown RBP25.4■■□□□ 1.66
PDLIM7-215ENST00000506161 PLEKHG1Q9ULL1 1385 aa25.39■■□□□ 1.65
PDLIM7-215ENST00000506161 NRXN3Q9Y4C0 1643 aa25.37■■□□□ 1.65
PDLIM7-215ENST00000506161 TRPM2O94759 1503 aa25.37■■□□□ 1.65
PDLIM7-215ENST00000506161 ADAMTS13Q76LX8 1427 aa25.37■■□□□ 1.65
PDLIM7-215ENST00000506161 RBM33Q96EV2 1170 aaKnown RBP25.36■■□□□ 1.65
PDLIM7-215ENST00000506161 KIF1BO60333 1816 aa25.34■■□□□ 1.65
PDLIM7-215ENST00000506161 TMEM94Q12767 1356 aa25.32■■□□□ 1.64
PDLIM7-215ENST00000506161 KCNA6P17658 529 aa25.32■■□□□ 1.64
PDLIM7-215ENST00000506161 NEXMIFQ5QGS0 1516 aa25.3■■□□□ 1.64
PDLIM7-215ENST00000506161 NKTRP30414 1462 aaKnown RBP25.29■■□□□ 1.64
PDLIM7-215ENST00000506161 PPP1R15AO75807 674 aaPredicted RBP25.29■■□□□ 1.64
PDLIM7-215ENST00000506161 BCANQ96GW7 911 aa25.29■■□□□ 1.64
PDLIM7-215ENST00000506161 TRIM52Q96A61 297 aa25.28■■□□□ 1.64
PDLIM7-215ENST00000506161 DIP2AQ14689 1571 aa25.27■■□□□ 1.64
PDLIM7-215ENST00000506161 PTPRUQ92729 1446 aa25.26■■□□□ 1.63
PDLIM7-215ENST00000506161 SETBP1Q9Y6X0 1596 aa25.24■■□□□ 1.63
PDLIM7-215ENST00000506161 FOXD1Q16676 465 aa25.24■■□□□ 1.63
PDLIM7-215ENST00000506161 POTEAQ6S8J7 498 aa25.24■■□□□ 1.63
PDLIM7-215ENST00000506161 PROSER2Q86WR7 435 aaPredicted RBP25.24■■□□□ 1.63
PDLIM7-215ENST00000506161 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.23■■□□□ 1.63
PDLIM7-215ENST00000506161 TBX22Q9Y458 520 aa25.23■■□□□ 1.63
PDLIM7-215ENST00000506161 SETD1AO15047 1707 aaKnown RBP25.22■■□□□ 1.63
PDLIM7-215ENST00000506161 XRN1Q8IZH2 1706 aaKnown RBP25.22■■□□□ 1.63
PDLIM7-215ENST00000506161 ROBO1Q9Y6N7 1651 aa25.21■■□□□ 1.63
PDLIM7-215ENST00000506161 PPLO60437 1756 aa25.21■■□□□ 1.63
PDLIM7-215ENST00000506161 FAM135BQ49AJ0 1406 aa25.2■■□□□ 1.63
PDLIM7-215ENST00000506161 SLC4A1APQ9BWU0 796 aaKnown RBP25.2■■□□□ 1.62
PDLIM7-215ENST00000506161 HDGFP51858 240 aaKnown RBP25.19■■□□□ 1.62
PDLIM7-215ENST00000506161 ZNF326Q5BKZ1 582 aaKnown RBP25.17■■□□□ 1.62
PDLIM7-215ENST00000506161 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.17■■□□□ 1.62
PDLIM7-215ENST00000506161 METP08581 1390 aa25.14■■□□□ 1.61
PDLIM7-215ENST00000506161 IFT172Q9UG01 1749 aa25.13■■□□□ 1.61
PDLIM7-215ENST00000506161 PIK3R4Q99570 1358 aa25.12■■□□□ 1.61
PDLIM7-215ENST00000506161 SETD5Q9C0A6 1442 aa25.1■■□□□ 1.61
PDLIM7-215ENST00000506161 MPHOSPH9Q99550 1183 aa25.09■■□□□ 1.61
PDLIM7-215ENST00000506161 AMOTL2Q9Y2J4 779 aa25.09■■□□□ 1.61
PDLIM7-215ENST00000506161 MSH6P52701 1360 aa25.08■■□□□ 1.61
PDLIM7-215ENST00000506161 NALCNQ8IZF0 1738 aa25.06■■□□□ 1.6
PDLIM7-215ENST00000506161 RAB3GAP2Q9H2M9 1393 aa25.05■■□□□ 1.6
PDLIM7-215ENST00000506161 SPATA31E1Q6ZUB1 1445 aa25.04■■□□□ 1.6
PDLIM7-215ENST00000506161 PHLPP1O60346 1717 aa25.04■■□□□ 1.6
PDLIM7-215ENST00000506161 NCOA3Q9Y6Q9 1424 aa25.03■■□□□ 1.6
PDLIM7-215ENST00000506161 SLAIN2Q9P270 581 aa25.01■■□□□ 1.59
PDLIM7-215ENST00000506161 CCDC144AA2RUR9 1427 aa25■■□□□ 1.59
PDLIM7-215ENST00000506161 COL16A1Q07092 1604 aaPredicted RBP25■■□□□ 1.59
PDLIM7-215ENST00000506161 ASXL1Q8IXJ9 1541 aa24.97■■□□□ 1.59
PDLIM7-215ENST00000506161 ADGRF5Q8IZF2 1346 aa24.97■■□□□ 1.59
PDLIM7-215ENST00000506161 JCADQ9P266 1359 aa24.96■■□□□ 1.59
PDLIM7-215ENST00000506161 C14orf37Q86TY3 774 aa24.96■■□□□ 1.59
PDLIM7-215ENST00000506161 RPGRIP1LQ68CZ1 1315 aa24.95■■□□□ 1.58
PDLIM7-215ENST00000506161 RGL3Q3MIN7 710 aa24.95■■□□□ 1.58
PDLIM7-215ENST00000506161 C19orf44Q9H6X5 657 aa24.95■■□□□ 1.58
PDLIM7-215ENST00000506161 ROBO2Q9HCK4 1378 aa24.93■■□□□ 1.58
PDLIM7-215ENST00000506161 VGFO15240 615 aaPredicted RBP24.93■■□□□ 1.58
PDLIM7-215ENST00000506161 AHDC1Q5TGY3 1603 aaPredicted RBP24.92■■□□□ 1.58
PDLIM7-215ENST00000506161 MST1RQ04912 1400 aa24.92■■□□□ 1.58
PDLIM7-215ENST00000506161 ADGRL3Q9HAR2 1447 aa24.91■■□□□ 1.58
PDLIM7-215ENST00000506161 UPF1Q92900 1129 aaKnown RBP eCLIP24.9■■□□□ 1.58
PDLIM7-215ENST00000506161 DCCP43146 1447 aa24.89■■□□□ 1.58
PDLIM7-215ENST00000506161 PTCH1Q13635 1447 aa24.89■■□□□ 1.58
PDLIM7-215ENST00000506161 PRAG1Q86YV5 1406 aa24.89■■□□□ 1.58
PDLIM7-215ENST00000506161 NHSL1Q5SYE7 1610 aa24.89■■□□□ 1.57
PDLIM7-215ENST00000506161 CADPS2Q86UW7 1296 aa24.88■■□□□ 1.57
PDLIM7-215ENST00000506161 ATF3P18847 181 aa24.87■■□□□ 1.57
PDLIM7-215ENST00000506161 PIK3C2GO75747 1445 aa24.86■■□□□ 1.57
PDLIM7-215ENST00000506161 ZNF772Q68DY9 489 aaPredicted RBP24.86■■□□□ 1.57
PDLIM7-215ENST00000506161 BRINP3Q76B58 766 aa24.86■■□□□ 1.57
PDLIM7-215ENST00000506161 KNDC1Q76NI1 1749 aa24.86■■□□□ 1.57
PDLIM7-215ENST00000506161 MEX3CQ5U5Q3 659 aaKnown RBP24.85■■□□□ 1.57
PDLIM7-215ENST00000506161 SPATA31A6Q5VVP1 1343 aa24.84■■□□□ 1.57
PDLIM7-215ENST00000506161 ANKRD30BQ9BXX2 1392 aa24.83■■□□□ 1.57
PDLIM7-215ENST00000506161 SHPRHQ149N8 1683 aa24.83■■□□□ 1.57
PDLIM7-215ENST00000506161 NRXN1Q9ULB1 1477 aa24.83■■□□□ 1.56
PDLIM7-215ENST00000506161 LRP6O75581 1613 aa24.83■■□□□ 1.56
PDLIM7-215ENST00000506161 DDX17Q92841 729 aaKnown RBP24.81■■□□□ 1.56
PDLIM7-215ENST00000506161 TMEM132EQ6IEE7 984 aa24.8■■□□□ 1.56
PDLIM7-215ENST00000506161 MYOM2P54296 1465 aa24.78■■□□□ 1.56
PDLIM7-215ENST00000506161 PLEKHH1Q9ULM0 1364 aa24.78■■□□□ 1.56
PDLIM7-215ENST00000506161 C1orf167Q5SNV9 1468 aa24.77■■□□□ 1.56
PDLIM7-215ENST00000506161 TECPR2O15040 1411 aa24.77■■□□□ 1.56
PDLIM7-215ENST00000506161 LAMC1P11047 1609 aa24.76■■□□□ 1.55
PDLIM7-215ENST00000506161 RXRBP28702 533 aa24.75■■□□□ 1.55
PDLIM7-215ENST00000506161 STK26Q9P289 416 aa24.75■■□□□ 1.55
PDLIM7-215ENST00000506161 ACIN1Q9UKV3 1341 aaKnown RBP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms