RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 CCDC181Q5TID7 509 aa11.62□□□□□ -0.55
HTT-203ENST00000506137 RINLQ6ZS11 566 aa11.62□□□□□ -0.55
HTT-203ENST00000506137 HS6ST3Q8IZP7 471 aa11.62□□□□□ -0.55
HTT-203ENST00000506137 NME8Q8N427 588 aa11.62□□□□□ -0.55
HTT-203ENST00000506137 KCNA1Q09470 495 aa11.61□□□□□ -0.55
HTT-203ENST00000506137 WDR78Q5VTH9 848 aa11.61□□□□□ -0.55
HTT-203ENST00000506137 YEATS2Q9ULM3 1422 aa11.6□□□□□ -0.55
HTT-203ENST00000506137 MADDQ8WXG6 1647 aa11.6□□□□□ -0.55
HTT-203ENST00000506137 UBAP1LF5GYI3 381 aa11.6□□□□□ -0.55
HTT-203ENST00000506137 NBPF20Q3BBV1 942 aa11.6□□□□□ -0.55
HTT-203ENST00000506137 LONRF3Q496Y0 759 aa11.6□□□□□ -0.55
HTT-203ENST00000506137 FAM9BQ8IZU0 186 aa11.6□□□□□ -0.55
HTT-203ENST00000506137 PROM2Q8N271 834 aa11.6□□□□□ -0.55
HTT-203ENST00000506137 RAD54L2Q9Y4B4 1467 aa11.59□□□□□ -0.55
HTT-203ENST00000506137 RBM26Q5T8P6 1007 aaKnown RBP11.59□□□□□ -0.55
HTT-203ENST00000506137 ATF5Q9Y2D1 282 aaPredicted RBP11.59□□□□□ -0.55
HTT-203ENST00000506137 SUGT1Q9Y2Z0 365 aa11.59□□□□□ -0.55
HTT-203ENST00000506137 STRCQ7RTU9 1775 aa11.59□□□□□ -0.55
HTT-203ENST00000506137 SREK1Q8WXA9 508 aaKnown RBP11.58□□□□□ -0.56
HTT-203ENST00000506137 PBRM1Q86U86 1689 aa11.57□□□□□ -0.56
HTT-203ENST00000506137 TCF3P15923 654 aa11.57□□□□□ -0.56
HTT-203ENST00000506137 DSG3P32926 999 aa11.57□□□□□ -0.56
HTT-203ENST00000506137 SETDB1Q15047 1291 aa11.57□□□□□ -0.56
HTT-203ENST00000506137 APBB1IPQ7Z5R6 666 aaPredicted RBP11.57□□□□□ -0.56
HTT-203ENST00000506137 BCORL1Q5H9F3 1711 aa11.57□□□□□ -0.56
HTT-203ENST00000506137 MAP3K4Q9Y6R4 1608 aa11.57□□□□□ -0.56
HTT-203ENST00000506137 CFAP43Q8NDM7 1665 aa11.56□□□□□ -0.56
HTT-203ENST00000506137 ABCB7O75027 752 aa11.56□□□□□ -0.56
HTT-203ENST00000506137 ARID4AP29374 1257 aaPredicted RBP11.56□□□□□ -0.56
HTT-203ENST00000506137 HSPA1LP34931 641 aa11.56□□□□□ -0.56
HTT-203ENST00000506137 SDR16C5Q8N3Y7 309 aa11.56□□□□□ -0.56
HTT-203ENST00000506137 PRG4Q92954 1404 aaPredicted RBP11.56□□□□□ -0.56
HTT-203ENST00000506137 MTA3Q9BTC8 594 aa11.56□□□□□ -0.56
HTT-203ENST00000506137 SOGA1O94964 1423 aa11.55□□□□□ -0.56
HTT-203ENST00000506137 NUP160Q12769 1436 aa11.55□□□□□ -0.56
HTT-203ENST00000506137 ZMYND10O75800 440 aa11.55□□□□□ -0.56
HTT-203ENST00000506137 ZRANB2O95218 330 aaKnown RBP eCLIP11.55□□□□□ -0.56
HTT-203ENST00000506137 GTF2E1P29083 439 aaPredicted RBP11.55□□□□□ -0.56
HTT-203ENST00000506137 ANP32AP39687 249 aaKnown RBP11.55□□□□□ -0.56
HTT-203ENST00000506137 SMC5Q8IY18 1101 aa11.55□□□□□ -0.56
HTT-203ENST00000506137 KIAA0586Q9BVV6 1533 aa11.55□□□□□ -0.56
HTT-203ENST00000506137 EIF3JO75822 258 aaKnown RBP11.54□□□□□ -0.56
HTT-203ENST00000506137 FOXD4L6Q3SYB3 417 aaPredicted RBP11.54□□□□□ -0.56
HTT-203ENST00000506137 FOXD4L3Q6VB84 417 aaPredicted RBP11.54□□□□□ -0.56
HTT-203ENST00000506137 KRBA2Q6ZNG9 492 aa11.54□□□□□ -0.56
HTT-203ENST00000506137 MICAL1Q8TDZ2 1067 aa11.54□□□□□ -0.56
HTT-203ENST00000506137 JADE2Q9NQC1 790 aa11.54□□□□□ -0.56
HTT-203ENST00000506137 RIMS1Q86UR5 1692 aaKnown RBP11.54□□□□□ -0.56
HTT-203ENST00000506137 METTL14Q9HCE5 456 aaKnown RBP11.53□□□□□ -0.56
HTT-203ENST00000506137 NUB1Q9Y5A7 615 aa11.53□□□□□ -0.56
HTT-203ENST00000506137 GRIN2AQ12879 1464 aa11.52□□□□□ -0.56
HTT-203ENST00000506137 C8orf37Q96NL8 207 aa11.52□□□□□ -0.57
HTT-203ENST00000506137 PLB1Q6P1J6 1458 aa11.51□□□□□ -0.57
HTT-203ENST00000506137 ARIH1Q9Y4X5 557 aaPredicted RBP11.51□□□□□ -0.57
HTT-203ENST00000506137 EXOC5O00471 708 aa11.5□□□□□ -0.57
HTT-203ENST00000506137 RIOK3O14730 519 aaKnown RBP11.5□□□□□ -0.57
HTT-203ENST00000506137 PPP1R15AO75807 674 aaPredicted RBP11.5□□□□□ -0.57
HTT-203ENST00000506137 FEZ2Q9UHY8 353 aaPredicted RBP11.5□□□□□ -0.57
HTT-203ENST00000506137 SETD1AO15047 1707 aaKnown RBP11.49□□□□□ -0.57
HTT-203ENST00000506137 TESPA1A2RU30 521 aaPredicted RBP11.49□□□□□ -0.57
HTT-203ENST00000506137 SPDYE4A6NLX3 237 aa11.49□□□□□ -0.57
HTT-203ENST00000506137 GOLIM4O00461 696 aa11.49□□□□□ -0.57
HTT-203ENST00000506137 POLA2Q14181 598 aa11.49□□□□□ -0.57
HTT-203ENST00000506137 CACTIN-AS1Q8N1I8 211 aa11.49□□□□□ -0.57
HTT-203ENST00000506137 UBXN4Q92575 508 aa11.49□□□□□ -0.57
HTT-203ENST00000506137 MKL1Q969V6 931 aa11.49□□□□□ -0.57
HTT-203ENST00000506137 KDM4CQ9H3R0 1056 aa11.49□□□□□ -0.57
HTT-203ENST00000506137 GPBP1L1Q9HC44 474 aaPredicted RBP11.49□□□□□ -0.57
HTT-203ENST00000506137 AK7Q96M32 723 aa11.48□□□□□ -0.57
HTT-203ENST00000506137 RGS17Q9UGC6 210 aaPredicted RBP11.48□□□□□ -0.57
HTT-203ENST00000506137 RBM47A0AV96 593 aaKnown RBP11.47□□□□□ -0.57
HTT-203ENST00000506137 UNCXA6NJT0 531 aa11.47□□□□□ -0.57
HTT-203ENST00000506137 RRP9O43818 475 aaKnown RBP11.47□□□□□ -0.57
HTT-203ENST00000506137 HDAC1Q13547 482 aaPredicted RBP11.47□□□□□ -0.57
HTT-203ENST00000506137 CLUAP1Q96AJ1 413 aa11.47□□□□□ -0.57
HTT-203ENST00000506137 STAC3Q96MF2 364 aa11.47□□□□□ -0.57
HTT-203ENST00000506137 CXorf38Q8TB03 319 aa11.46□□□□□ -0.57
HTT-203ENST00000506137 ASXL2Q76L83 1435 aa11.45□□□□□ -0.58
HTT-203ENST00000506137 CCER2I3L3R5 266 aa11.45□□□□□ -0.58
HTT-203ENST00000506137 GTPBP6O43824 516 aaPredicted RBP11.45□□□□□ -0.58
HTT-203ENST00000506137 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.45□□□□□ -0.58
HTT-203ENST00000506137 CCDC85AQ96PX6 553 aaPredicted RBP11.45□□□□□ -0.58
HTT-203ENST00000506137 TSPAN18Q96SJ8 248 aa11.45□□□□□ -0.58
HTT-203ENST00000506137 SLC52A1Q9NWF4 448 aa11.45□□□□□ -0.58
HTT-203ENST00000506137 PREX1Q8TCU6 1659 aa11.45□□□□□ -0.58
HTT-203ENST00000506137 KCNV2Q8TDN2 545 aa11.44□□□□□ -0.58
HTT-203ENST00000506137 HDAC5Q9UQL6 1122 aa11.44□□□□□ -0.58
HTT-203ENST00000506137 WIZO95785 1651 aa11.43□□□□□ -0.58
HTT-203ENST00000506137 CCDC96Q2M329 555 aa11.43□□□□□ -0.58
HTT-203ENST00000506137 SNRNP27Q8WVK2 155 aaKnown RBP11.43□□□□□ -0.58
HTT-203ENST00000506137 SIRT1Q96EB6 747 aa11.43□□□□□ -0.58
HTT-203ENST00000506137 ZNF777Q9ULD5 760 aaPredicted RBP11.43□□□□□ -0.58
HTT-203ENST00000506137 ONECUT3O60422 494 aaPredicted RBP11.42□□□□□ -0.58
HTT-203ENST00000506137 ZFYVE27Q5T4F4 411 aa11.42□□□□□ -0.58
HTT-203ENST00000506137 UPF1Q92900 1129 aaKnown RBP eCLIP11.42□□□□□ -0.58
HTT-203ENST00000506137 CREB3O43889 395 aa11.41□□□□□ -0.58
HTT-203ENST00000506137 SH3BP5O60239 455 aa11.41□□□□□ -0.58
HTT-203ENST00000506137 APPP05067 770 aa11.41□□□□□ -0.58
HTT-203ENST00000506137 HSP90AA2PQ14568 343 aaPredicted RBP11.41□□□□□ -0.58
HTT-203ENST00000506137 NBPF9Q3BBW0 867 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms