RNA–Protein interactions for RNA: ENST00000505965.1

TSC22D3-212, Transcript of TSC22 domain family member 3, humanhuman

TSL 3

Gene TSC22D3, Length 425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-212ENST00000505965 RIMS2Q9UQ26 1411 aa16.47■□□□□ 0.23
TSC22D3-212ENST00000505965 NEXMIFQ5QGS0 1516 aa16.46■□□□□ 0.23
TSC22D3-212ENST00000505965 ZNF326Q5BKZ1 582 aaKnown RBP16.46■□□□□ 0.23
TSC22D3-212ENST00000505965 TXNDC2Q86VQ3 553 aa16.46■□□□□ 0.23
TSC22D3-212ENST00000505965 NCKAP5LQ9HCH0 1330 aa16.45■□□□□ 0.22
TSC22D3-212ENST00000505965 NUTM2DQ5VT03 806 aaPredicted RBP16.44■□□□□ 0.22
TSC22D3-212ENST00000505965 ANKLE2Q86XL3 938 aa16.44■□□□□ 0.22
TSC22D3-212ENST00000505965 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.43■□□□□ 0.22
TSC22D3-212ENST00000505965 DCAF11Q8TEB1 546 aa16.43■□□□□ 0.22
TSC22D3-212ENST00000505965 ADGRF5Q8IZF2 1346 aa16.43■□□□□ 0.22
TSC22D3-212ENST00000505965 PPLO60437 1756 aa16.42■□□□□ 0.22
TSC22D3-212ENST00000505965 HDGFP51858 240 aaKnown RBP16.42■□□□□ 0.22
TSC22D3-212ENST00000505965 TIMELESSQ9UNS1 1208 aa16.42■□□□□ 0.22
TSC22D3-212ENST00000505965 IFT172Q9UG01 1749 aa16.42■□□□□ 0.22
TSC22D3-212ENST00000505965 STRCQ7RTU9 1775 aa16.41■□□□□ 0.22
TSC22D3-212ENST00000505965 VGFO15240 615 aaPredicted RBP16.41■□□□□ 0.22
TSC22D3-212ENST00000505965 STAC3Q96MF2 364 aa16.41■□□□□ 0.22
TSC22D3-212ENST00000505965 EID1Q9Y6B2 187 aa16.41■□□□□ 0.22
TSC22D3-212ENST00000505965 MED14O60244 1454 aa16.41■□□□□ 0.22
TSC22D3-212ENST00000505965 SCAF11Q99590 1463 aaKnown RBP16.41■□□□□ 0.22
TSC22D3-212ENST00000505965 KDM2AQ9Y2K7 1162 aa16.4■□□□□ 0.22
TSC22D3-212ENST00000505965 NRXN1Q9ULB1 1477 aa16.4■□□□□ 0.22
TSC22D3-212ENST00000505965 PLEKHG1Q9ULL1 1385 aa16.38■□□□□ 0.21
TSC22D3-212ENST00000505965 MYOM2P54296 1465 aa16.38■□□□□ 0.21
TSC22D3-212ENST00000505965 PPP1R15AO75807 674 aaPredicted RBP16.38■□□□□ 0.21
TSC22D3-212ENST00000505965 TONSLQ96HA7 1378 aa16.38■□□□□ 0.21
TSC22D3-212ENST00000505965 NBPF8Q3BBV2 869 aa16.36■□□□□ 0.21
TSC22D3-212ENST00000505965 NPHP4O75161 1426 aaPredicted RBP16.36■□□□□ 0.21
TSC22D3-212ENST00000505965 ADAMTS13Q76LX8 1427 aa16.36■□□□□ 0.21
TSC22D3-212ENST00000505965 C14orf93Q9H972 538 aaKnown RBP16.35■□□□□ 0.21
TSC22D3-212ENST00000505965 PIK3C2GO75747 1445 aa16.35■□□□□ 0.21
TSC22D3-212ENST00000505965 NRXN3Q9Y4C0 1643 aa16.34■□□□□ 0.21
TSC22D3-212ENST00000505965 SENP3Q9H4L4 574 aaPredicted RBP16.34■□□□□ 0.21
TSC22D3-212ENST00000505965 TBX22Q9Y458 520 aa16.34■□□□□ 0.21
TSC22D3-212ENST00000505965 PRAG1Q86YV5 1406 aa16.34■□□□□ 0.21
TSC22D3-212ENST00000505965 POLR1AO95602 1720 aaPredicted RBP16.33■□□□□ 0.21
TSC22D3-212ENST00000505965 SLC26A8Q96RN1 970 aa16.33■□□□□ 0.2
TSC22D3-212ENST00000505965 SETBP1Q9Y6X0 1596 aa16.33■□□□□ 0.2
TSC22D3-212ENST00000505965 CFAP70Q5T0N1 1121 aa16.32■□□□□ 0.2
TSC22D3-212ENST00000505965 IQGAP1P46940 1657 aa16.3■□□□□ 0.2
TSC22D3-212ENST00000505965 ALKQ9UM73 1620 aa16.3■□□□□ 0.2
TSC22D3-212ENST00000505965 NBPF1Q3BBV0 1214 aa16.29■□□□□ 0.2
TSC22D3-212ENST00000505965 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
TSC22D3-212ENST00000505965 SETD1AO15047 1707 aaKnown RBP16.28■□□□□ 0.2
TSC22D3-212ENST00000505965 METP08581 1390 aa16.28■□□□□ 0.2
TSC22D3-212ENST00000505965 BCANQ96GW7 911 aa16.27■□□□□ 0.2
TSC22D3-212ENST00000505965 ASXL1Q8IXJ9 1541 aa16.26■□□□□ 0.19
TSC22D3-212ENST00000505965 TMEM132EQ6IEE7 984 aa16.26■□□□□ 0.19
TSC22D3-212ENST00000505965 PTPRUQ92729 1446 aa16.26■□□□□ 0.19
TSC22D3-212ENST00000505965 ADGRB1O14514 1584 aa16.25■□□□□ 0.19
TSC22D3-212ENST00000505965 DIP2AQ14689 1571 aa16.24■□□□□ 0.19
TSC22D3-212ENST00000505965 PIK3R4Q99570 1358 aa16.24■□□□□ 0.19
TSC22D3-212ENST00000505965 KIAA1210Q9ULL0 1709 aa16.23■□□□□ 0.19
TSC22D3-212ENST00000505965 TRPM1Q7Z4N2 1603 aa16.23■□□□□ 0.19
TSC22D3-212ENST00000505965 KCNA6P17658 529 aa16.22■□□□□ 0.19
TSC22D3-212ENST00000505965 GPRASP1Q5JY77 1395 aa16.22■□□□□ 0.19
TSC22D3-212ENST00000505965 RALGAPBQ86X10 1494 aa16.21■□□□□ 0.19
TSC22D3-212ENST00000505965 CHD2O14647 1828 aaKnown RBP16.2■□□□□ 0.18
TSC22D3-212ENST00000505965 AMOTL2Q9Y2J4 779 aa16.2■□□□□ 0.18
TSC22D3-212ENST00000505965 LRPPRCP42704 1394 aaKnown RBP16.2■□□□□ 0.18
TSC22D3-212ENST00000505965 ABCC11Q96J66 1382 aa16.2■□□□□ 0.18
TSC22D3-212ENST00000505965 ZNF335Q9H4Z2 1342 aaPredicted RBP16.19■□□□□ 0.18
TSC22D3-212ENST00000505965 LAMC1P11047 1609 aa16.19■□□□□ 0.18
TSC22D3-212ENST00000505965 YTHDC2Q9H6S0 1430 aaKnown RBP16.19■□□□□ 0.18
TSC22D3-212ENST00000505965 STRCP1A6NGW2 1772 aa16.18■□□□□ 0.18
TSC22D3-212ENST00000505965 ZEB1P37275 1124 aaPredicted RBP16.17■□□□□ 0.18
TSC22D3-212ENST00000505965 SIRT1Q96EB6 747 aa16.17■□□□□ 0.18
TSC22D3-212ENST00000505965 STK26Q9P289 416 aa16.17■□□□□ 0.18
TSC22D3-212ENST00000505965 TECPR2O15040 1411 aa16.17■□□□□ 0.18
TSC22D3-212ENST00000505965 ROCK2O75116 1388 aaKnown RBP16.16■□□□□ 0.18
TSC22D3-212ENST00000505965 NWD1Q149M9 1564 aa16.16■□□□□ 0.18
TSC22D3-212ENST00000505965 XRN1Q8IZH2 1706 aaKnown RBP16.16■□□□□ 0.18
TSC22D3-212ENST00000505965 ROBO2Q9HCK4 1378 aa16.15■□□□□ 0.18
TSC22D3-212ENST00000505965 LTBP4Q8N2S1 1624 aa16.15■□□□□ 0.18
TSC22D3-212ENST00000505965 CARD11Q9BXL7 1154 aa16.14■□□□□ 0.17
TSC22D3-212ENST00000505965 TRAK1Q9UPV9 953 aa16.14■□□□□ 0.17
TSC22D3-212ENST00000505965 WAPLQ7Z5K2 1190 aa16.13■□□□□ 0.17
TSC22D3-212ENST00000505965 DLC1Q96QB1 1528 aa16.12■□□□□ 0.17
TSC22D3-212ENST00000505965 PLEKHH1Q9ULM0 1364 aa16.12■□□□□ 0.17
TSC22D3-212ENST00000505965 FAM135BQ49AJ0 1406 aa16.11■□□□□ 0.17
TSC22D3-212ENST00000505965 KNDC1Q76NI1 1749 aa16.11■□□□□ 0.17
TSC22D3-212ENST00000505965 PTCH1Q13635 1447 aa16.11■□□□□ 0.17
TSC22D3-212ENST00000505965 LRRC7Q96NW7 1537 aa16.1■□□□□ 0.17
TSC22D3-212ENST00000505965 PROSER2Q86WR7 435 aaPredicted RBP16.1■□□□□ 0.17
TSC22D3-212ENST00000505965 RBM33Q96EV2 1170 aaKnown RBP16.1■□□□□ 0.17
TSC22D3-212ENST00000505965 NKTRP30414 1462 aaKnown RBP16.1■□□□□ 0.17
TSC22D3-212ENST00000505965 CPS1P31327 1500 aa16.09■□□□□ 0.17
TSC22D3-212ENST00000505965 PRAM1Q96QH2 718 aa16.09■□□□□ 0.17
TSC22D3-212ENST00000505965 TMEM94Q12767 1356 aa16.07■□□□□ 0.16
TSC22D3-212ENST00000505965 ARHGEF28Q8N1W1 1705 aaKnown RBP16.07■□□□□ 0.16
TSC22D3-212ENST00000505965 XIRP1Q702N8 1843 aaKnown RBP16.05■□□□□ 0.16
TSC22D3-212ENST00000505965 NCOA3Q9Y6Q9 1424 aa16.05■□□□□ 0.16
TSC22D3-212ENST00000505965 USP47Q96K76 1375 aa16.05■□□□□ 0.16
TSC22D3-212ENST00000505965 ST20-MTHFSA0A0A6YYL1 179 aa16.05■□□□□ 0.16
TSC22D3-212ENST00000505965 TESK2Q96S53 571 aa16.05■□□□□ 0.16
TSC22D3-212ENST00000505965 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.05■□□□□ 0.16
TSC22D3-212ENST00000505965 CENPJQ9HC77 1338 aaPredicted RBP16.04■□□□□ 0.16
TSC22D3-212ENST00000505965 SAFB2Q14151 953 aaKnown RBP eCLIP16.04■□□□□ 0.16
TSC22D3-212ENST00000505965 POGKQ9P215 609 aa16.04■□□□□ 0.16
TSC22D3-212ENST00000505965 HSPA5P11021 654 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms