RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 KCNA6P17658 529 aa37.76■■■■□ 3.64
HERC4-212ENST00000505760 MED1Q15648 1581 aaPredicted RBP37.76■■■■□ 3.63
HERC4-212ENST00000505760 IQGAP3Q86VI3 1631 aa37.76■■■■□ 3.63
HERC4-212ENST00000505760 TMEM131LA2VDJ0 1609 aa37.73■■■■□ 3.63
HERC4-212ENST00000505760 HDGFP51858 240 aaKnown RBP37.72■■■■□ 3.63
HERC4-212ENST00000505760 ZFYVE9O95405 1425 aa37.71■■■■□ 3.63
HERC4-212ENST00000505760 NUP155O75694 1391 aa37.71■■■■□ 3.63
HERC4-212ENST00000505760 PPP1R15AO75807 674 aaPredicted RBP37.71■■■■□ 3.63
HERC4-212ENST00000505760 TMEM94Q12767 1356 aa37.7■■■■□ 3.63
HERC4-212ENST00000505760 CHGAP10645 457 aaKnown RBP37.7■■■■□ 3.63
HERC4-212ENST00000505760 RIMS2Q9UQ26 1411 aa37.7■■■■□ 3.62
HERC4-212ENST00000505760 PROSER2Q86WR7 435 aaPredicted RBP37.69■■■■□ 3.62
HERC4-212ENST00000505760 PLEKHG1Q9ULL1 1385 aa37.67■■■■□ 3.62
HERC4-212ENST00000505760 NWD1Q149M9 1564 aa37.64■■■■□ 3.62
HERC4-212ENST00000505760 NKTRP30414 1462 aaKnown RBP37.64■■■■□ 3.62
HERC4-212ENST00000505760 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.61■■■■□ 3.61
HERC4-212ENST00000505760 RBM33Q96EV2 1170 aaKnown RBP37.61■■■■□ 3.61
HERC4-212ENST00000505760 CHD2O14647 1828 aaKnown RBP37.57■■■■□ 3.6
HERC4-212ENST00000505760 PHF23Q9BUL5 403 aaPredicted RBP37.56■■■■□ 3.6
HERC4-212ENST00000505760 FAM135BQ49AJ0 1406 aa37.55■■■■□ 3.6
HERC4-212ENST00000505760 NUTM2DQ5VT03 806 aaPredicted RBP37.54■■■■□ 3.6
HERC4-212ENST00000505760 TBX22Q9Y458 520 aa37.52■■■■□ 3.6
HERC4-212ENST00000505760 MSH6P52701 1360 aa37.51■■■■□ 3.59
HERC4-212ENST00000505760 RRBP1Q9P2E9 1410 aaKnown RBP37.51■■■■□ 3.59
HERC4-212ENST00000505760 SPHKAPQ2M3C7 1700 aa37.48■■■■□ 3.59
HERC4-212ENST00000505760 ROBO1Q9Y6N7 1651 aa37.47■■■■□ 3.59
HERC4-212ENST00000505760 DIP2AQ14689 1571 aa37.45■■■■□ 3.59
HERC4-212ENST00000505760 ADAMTS13Q76LX8 1427 aa37.44■■■■□ 3.58
HERC4-212ENST00000505760 SLAIN2Q9P270 581 aa37.38■■■■□ 3.57
HERC4-212ENST00000505760 PIK3R4Q99570 1358 aa37.38■■■■□ 3.57
HERC4-212ENST00000505760 NAIPQ13075 1403 aa37.37■■■■□ 3.57
HERC4-212ENST00000505760 C14orf37Q86TY3 774 aa37.37■■■■□ 3.57
HERC4-212ENST00000505760 TRPM2O94759 1503 aa37.36■■■■□ 3.57
HERC4-212ENST00000505760 ZNF326Q5BKZ1 582 aaKnown RBP37.35■■■■□ 3.57
HERC4-212ENST00000505760 NCOA3Q9Y6Q9 1424 aa37.35■■■■□ 3.57
HERC4-212ENST00000505760 AMOTL2Q9Y2J4 779 aa37.28■■■■□ 3.56
HERC4-212ENST00000505760 CLTCL1P53675 1640 aa37.28■■■■□ 3.56
HERC4-212ENST00000505760 PHLPP1O60346 1717 aa37.27■■■■□ 3.56
HERC4-212ENST00000505760 SETBP1Q9Y6X0 1596 aa37.25■■■■□ 3.55
HERC4-212ENST00000505760 NRXN3Q9Y4C0 1643 aa37.25■■■■□ 3.55
HERC4-212ENST00000505760 TRIM52Q96A61 297 aa37.25■■■■□ 3.55
HERC4-212ENST00000505760 C19orf44Q9H6X5 657 aa37.25■■■■□ 3.55
HERC4-212ENST00000505760 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.24■■■■□ 3.55
HERC4-212ENST00000505760 HFM1A2PYH4 1435 aa37.24■■■■□ 3.55
HERC4-212ENST00000505760 PTPRUQ92729 1446 aa37.24■■■■□ 3.55
HERC4-212ENST00000505760 KIF1BO60333 1816 aa37.24■■■■□ 3.55
HERC4-212ENST00000505760 ATF3P18847 181 aa37.23■■■■□ 3.55
HERC4-212ENST00000505760 CADPS2Q86UW7 1296 aa37.23■■■■□ 3.55
HERC4-212ENST00000505760 RGS17Q9UGC6 210 aaPredicted RBP37.18■■■■□ 3.54
HERC4-212ENST00000505760 NEXMIFQ5QGS0 1516 aa37.17■■■■□ 3.54
HERC4-212ENST00000505760 XRN1Q8IZH2 1706 aaKnown RBP37.16■■■■□ 3.54
HERC4-212ENST00000505760 JCADQ9P266 1359 aa37.14■■■■□ 3.54
HERC4-212ENST00000505760 SLC4A1APQ9BWU0 796 aaKnown RBP37.13■■■■□ 3.53
HERC4-212ENST00000505760 METP08581 1390 aa37.13■■■■□ 3.53
HERC4-212ENST00000505760 COL16A1Q07092 1604 aaPredicted RBP37.1■■■■□ 3.53
HERC4-212ENST00000505760 DCCP43146 1447 aa37.07■■■■□ 3.52
HERC4-212ENST00000505760 AHDC1Q5TGY3 1603 aaPredicted RBP37.04■■■■□ 3.52
HERC4-212ENST00000505760 VGFO15240 615 aaPredicted RBP37.03■■■■□ 3.52
HERC4-212ENST00000505760 BRINP3Q76B58 766 aa37■■■■□ 3.51
HERC4-212ENST00000505760 POTEAQ6S8J7 498 aa36.99■■■■□ 3.51
HERC4-212ENST00000505760 RPGRIP1LQ68CZ1 1315 aa36.98■■■■□ 3.51
HERC4-212ENST00000505760 ADGRL3Q9HAR2 1447 aa36.95■■■■□ 3.51
HERC4-212ENST00000505760 SPATA31A6Q5VVP1 1343 aa36.95■■■■□ 3.51
HERC4-212ENST00000505760 MST1RQ04912 1400 aa36.94■■■■□ 3.5
HERC4-212ENST00000505760 FOXD1Q16676 465 aa36.94■■■■□ 3.5
HERC4-212ENST00000505760 PPLO60437 1756 aa36.94■■■■□ 3.5
HERC4-212ENST00000505760 ASXL1Q8IXJ9 1541 aa36.93■■■■□ 3.5
HERC4-212ENST00000505760 SHPRHQ149N8 1683 aa36.93■■■■□ 3.5
HERC4-212ENST00000505760 SETD1AO15047 1707 aaKnown RBP36.92■■■■□ 3.5
HERC4-212ENST00000505760 NALCNQ8IZF0 1738 aa36.92■■■■□ 3.5
HERC4-212ENST00000505760 MEX3CQ5U5Q3 659 aaKnown RBP36.89■■■■□ 3.5
HERC4-212ENST00000505760 LRP6O75581 1613 aa36.88■■■■□ 3.49
HERC4-212ENST00000505760 PTCH1Q13635 1447 aa36.86■■■■□ 3.49
HERC4-212ENST00000505760 CCDC144AA2RUR9 1427 aa36.85■■■■□ 3.49
HERC4-212ENST00000505760 NHSL1Q5SYE7 1610 aa36.85■■■■□ 3.49
HERC4-212ENST00000505760 MPHOSPH9Q99550 1183 aa36.83■■■■□ 3.49
HERC4-212ENST00000505760 ROBO2Q9HCK4 1378 aa36.82■■■■□ 3.49
HERC4-212ENST00000505760 SETD5Q9C0A6 1442 aa36.79■■■■□ 3.48
HERC4-212ENST00000505760 RGL3Q3MIN7 710 aa36.78■■■■□ 3.48
HERC4-212ENST00000505760 NUTM2BA6NNL0 878 aaPredicted RBP36.77■■■■□ 3.48
HERC4-212ENST00000505760 NUTM2EB1AL46 878 aaPredicted RBP36.77■■■■□ 3.48
HERC4-212ENST00000505760 NUTM2AQ8IVF1 878 aaPredicted RBP36.77■■■■□ 3.48
HERC4-212ENST00000505760 PRAG1Q86YV5 1406 aa36.76■■■■□ 3.48
HERC4-212ENST00000505760 LRRC59Q96AG4 307 aaKnown RBP36.76■■■■□ 3.48
HERC4-212ENST00000505760 C1orf167Q5SNV9 1468 aa36.75■■■■□ 3.47
HERC4-212ENST00000505760 ZNF772Q68DY9 489 aaPredicted RBP36.75■■■■□ 3.47
HERC4-212ENST00000505760 DDX17Q92841 729 aaKnown RBP36.74■■■■□ 3.47
HERC4-212ENST00000505760 SPATA31E1Q6ZUB1 1445 aa36.73■■■■□ 3.47
HERC4-212ENST00000505760 ADGRF5Q8IZF2 1346 aa36.72■■■■□ 3.47
HERC4-212ENST00000505760 ACIN1Q9UKV3 1341 aaKnown RBP36.71■■■■□ 3.47
HERC4-212ENST00000505760 ANKRD30BQ9BXX2 1392 aa36.7■■■■□ 3.47
HERC4-212ENST00000505760 IFT172Q9UG01 1749 aa36.7■■■■□ 3.47
HERC4-212ENST00000505760 ORAI2Q96SN7 254 aa36.64■■■■□ 3.46
HERC4-212ENST00000505760 PNPLA6Q8IY17 1366 aa36.64■■■■□ 3.46
HERC4-212ENST00000505760 STK26Q9P289 416 aa36.62■■■■□ 3.45
HERC4-212ENST00000505760 LAMC1P11047 1609 aa36.62■■■■□ 3.45
HERC4-212ENST00000505760 CDC42BPGQ6DT37 1551 aa36.58■■■■□ 3.45
HERC4-212ENST00000505760 AFF2P51816 1311 aa36.58■■■■□ 3.45
HERC4-212ENST00000505760 PIK3C2GO75747 1445 aa36.57■■■■□ 3.44
HERC4-212ENST00000505760 LRPPRCP42704 1394 aaKnown RBP36.56■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms