RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 CLTCL1P53675 1640 aa11.25□□□□□ -0.61
COL4A5-208ENST00000505728 ZNF335Q9H4Z2 1342 aaPredicted RBP11.25□□□□□ -0.61
COL4A5-208ENST00000505728 USP47Q96K76 1375 aa11.25□□□□□ -0.61
COL4A5-208ENST00000505728 CFAP65Q6ZU64 1925 aaKnown RBP11.25□□□□□ -0.61
COL4A5-208ENST00000505728 A2ML1A8K2U0 1454 aa11.25□□□□□ -0.61
COL4A5-208ENST00000505728 KIF1BO60333 1816 aa11.24□□□□□ -0.61
COL4A5-208ENST00000505728 GPRASP1Q5JY77 1395 aa11.24□□□□□ -0.61
COL4A5-208ENST00000505728 ILDR2Q71H61 639 aa11.23□□□□□ -0.61
COL4A5-208ENST00000505728 WASHC2AQ641Q2 1341 aa11.23□□□□□ -0.61
COL4A5-208ENST00000505728 ROCK2O75116 1388 aaKnown RBP11.23□□□□□ -0.61
COL4A5-208ENST00000505728 CCDC7Q96M83 1385 aa11.23□□□□□ -0.61
COL4A5-208ENST00000505728 SPATA31D1Q6ZQQ2 1576 aa11.23□□□□□ -0.61
COL4A5-208ENST00000505728 ZC3H13Q5T200 1668 aaKnown RBP11.23□□□□□ -0.61
COL4A5-208ENST00000505728 NOS1P29475 1434 aa11.22□□□□□ -0.61
COL4A5-208ENST00000505728 FBXO31Q5XUX0 539 aaPredicted RBP11.22□□□□□ -0.61
COL4A5-208ENST00000505728 TRPM1Q7Z4N2 1603 aa11.22□□□□□ -0.61
COL4A5-208ENST00000505728 DISP3Q9P2K9 1392 aa11.22□□□□□ -0.61
COL4A5-208ENST00000505728 LAMC1P11047 1609 aa11.21□□□□□ -0.61
COL4A5-208ENST00000505728 RPGRIP1LQ68CZ1 1315 aa11.21□□□□□ -0.61
COL4A5-208ENST00000505728 ANP32CO43423 234 aa11.21□□□□□ -0.61
COL4A5-208ENST00000505728 C11orf95C9JLR9 678 aaPredicted RBP11.2□□□□□ -0.62
COL4A5-208ENST00000505728 TNRQ92752 1358 aa11.19□□□□□ -0.62
COL4A5-208ENST00000505728 KIF7Q2M1P5 1343 aa11.19□□□□□ -0.62
COL4A5-208ENST00000505728 CCER2I3L3R5 266 aa11.19□□□□□ -0.62
COL4A5-208ENST00000505728 NBPF1Q3BBV0 1214 aa11.19□□□□□ -0.62
COL4A5-208ENST00000505728 SLC52A1Q9NWF4 448 aa11.19□□□□□ -0.62
COL4A5-208ENST00000505728 ST20-MTHFSA0A0A6YYL1 179 aa11.18□□□□□ -0.62
COL4A5-208ENST00000505728 CENPBP07199 599 aaPredicted RBP11.18□□□□□ -0.62
COL4A5-208ENST00000505728 MYOM2P54296 1465 aa11.18□□□□□ -0.62
COL4A5-208ENST00000505728 STRCP1A6NGW2 1772 aa11.17□□□□□ -0.62
COL4A5-208ENST00000505728 KIAA1210Q9ULL0 1709 aa11.17□□□□□ -0.62
COL4A5-208ENST00000505728 UGGT1Q9NYU2 1555 aa11.16□□□□□ -0.62
COL4A5-208ENST00000505728 ADGRB3O60242 1522 aa11.16□□□□□ -0.62
COL4A5-208ENST00000505728 UBAP1LF5GYI3 381 aa11.16□□□□□ -0.62
COL4A5-208ENST00000505728 CHGAP10645 457 aaKnown RBP11.16□□□□□ -0.62
COL4A5-208ENST00000505728 IQGAP1P46940 1657 aa11.15□□□□□ -0.62
COL4A5-208ENST00000505728 NLRP1Q9C000 1473 aa11.15□□□□□ -0.62
COL4A5-208ENST00000505728 IFT172Q9UG01 1749 aa11.15□□□□□ -0.63
COL4A5-208ENST00000505728 NRXN1Q9ULB1 1477 aa11.14□□□□□ -0.63
COL4A5-208ENST00000505728 PIK3C2BO00750 1634 aa11.14□□□□□ -0.63
COL4A5-208ENST00000505728 SLC24A1O60721 1099 aa11.14□□□□□ -0.63
COL4A5-208ENST00000505728 IDI1Q13907 227 aa11.14□□□□□ -0.63
COL4A5-208ENST00000505728 UBR1Q8IWV7 1749 aa11.14□□□□□ -0.63
COL4A5-208ENST00000505728 CPS1P31327 1500 aa11.14□□□□□ -0.63
COL4A5-208ENST00000505728 ALKQ9UM73 1620 aa11.13□□□□□ -0.63
COL4A5-208ENST00000505728 MED14O60244 1454 aa11.13□□□□□ -0.63
COL4A5-208ENST00000505728 ADGRF5Q8IZF2 1346 aa11.13□□□□□ -0.63
COL4A5-208ENST00000505728 SYNMO15061 1565 aa11.13□□□□□ -0.63
COL4A5-208ENST00000505728 ERVK-7P63135 1459 aa11.12□□□□□ -0.63
COL4A5-208ENST00000505728 VGFO15240 615 aaPredicted RBP11.12□□□□□ -0.63
COL4A5-208ENST00000505728 PPLO60437 1756 aa11.12□□□□□ -0.63
COL4A5-208ENST00000505728 SCAF11Q99590 1463 aaKnown RBP11.12□□□□□ -0.63
COL4A5-208ENST00000505728 NPHP4O75161 1426 aaPredicted RBP11.11□□□□□ -0.63
COL4A5-208ENST00000505728 SOCS7O14512 581 aa11.11□□□□□ -0.63
COL4A5-208ENST00000505728 TMF1P82094 1093 aa11.11□□□□□ -0.63
COL4A5-208ENST00000505728 ANKLE2Q86XL3 938 aa11.11□□□□□ -0.63
COL4A5-208ENST00000505728 TESK2Q96S53 571 aa11.11□□□□□ -0.63
COL4A5-208ENST00000505728 C14orf93Q9H972 538 aaKnown RBP11.11□□□□□ -0.63
COL4A5-208ENST00000505728 ZFYVE9O95405 1425 aa11.1□□□□□ -0.63
COL4A5-208ENST00000505728 CFAP70Q5T0N1 1121 aa11.1□□□□□ -0.63
COL4A5-208ENST00000505728 THEMISQ8N1K5 641 aaPredicted RBP11.1□□□□□ -0.63
COL4A5-208ENST00000505728 XIRP1Q702N8 1843 aaKnown RBP11.09□□□□□ -0.63
COL4A5-208ENST00000505728 EIF3AQ14152 1382 aaKnown RBP11.09□□□□□ -0.63
COL4A5-208ENST00000505728 CDCA8Q53HL2 280 aa11.09□□□□□ -0.63
COL4A5-208ENST00000505728 YTHDC1Q96MU7 727 aaKnown RBP11.09□□□□□ -0.63
COL4A5-208ENST00000505728 POLR3GLQ9BT43 218 aa11.08□□□□□ -0.64
COL4A5-208ENST00000505728 MED1Q15648 1581 aaPredicted RBP11.07□□□□□ -0.64
COL4A5-208ENST00000505728 SETBP1Q9Y6X0 1596 aa11.07□□□□□ -0.64
COL4A5-208ENST00000505728 HSPA1LP34931 641 aa11.07□□□□□ -0.64
COL4A5-208ENST00000505728 PIP4K2BP78356 416 aa11.07□□□□□ -0.64
COL4A5-208ENST00000505728 PRKRIP1Q9H875 184 aaPredicted RBP11.07□□□□□ -0.64
COL4A5-208ENST00000505728 PIK3C2GO75747 1445 aa11.07□□□□□ -0.64
COL4A5-208ENST00000505728 TMEM131LA2VDJ0 1609 aa11.06□□□□□ -0.64
COL4A5-208ENST00000505728 NEXMIFQ5QGS0 1516 aa11.06□□□□□ -0.64
COL4A5-208ENST00000505728 STAG3Q9UJ98 1225 aa11.06□□□□□ -0.64
COL4A5-208ENST00000505728 SCAF1Q9H7N4 1312 aaKnown RBP11.06□□□□□ -0.64
COL4A5-208ENST00000505728 LRRC7Q96NW7 1537 aa11.05□□□□□ -0.64
COL4A5-208ENST00000505728 TOM1O60784 492 aa11.05□□□□□ -0.64
COL4A5-208ENST00000505728 ARHGAP23Q9P227 1491 aa11.05□□□□□ -0.64
COL4A5-208ENST00000505728 MYO5BQ9ULV0 1848 aa11.05□□□□□ -0.64
COL4A5-208ENST00000505728 SLIT1O75093 1534 aa11.04□□□□□ -0.64
COL4A5-208ENST00000505728 LTKP29376 864 aa11.03□□□□□ -0.64
COL4A5-208ENST00000505728 KDM5AP29375 1690 aaKnown RBP11.03□□□□□ -0.64
COL4A5-208ENST00000505728 KTN1Q86UP2 1357 aaKnown RBP11.03□□□□□ -0.64
COL4A5-208ENST00000505728 SBNO2Q9Y2G9 1366 aa11.03□□□□□ -0.64
COL4A5-208ENST00000505728 HDGFP51858 240 aaKnown RBP11.02□□□□□ -0.65
COL4A5-208ENST00000505728 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.02□□□□□ -0.65
COL4A5-208ENST00000505728 RALBP1Q15311 655 aa11.01□□□□□ -0.65
COL4A5-208ENST00000505728 ADGRB1O14514 1584 aa11.01□□□□□ -0.65
COL4A5-208ENST00000505728 CENPJQ9HC77 1338 aaPredicted RBP11.01□□□□□ -0.65
COL4A5-208ENST00000505728 PER1O15534 1290 aaPredicted RBP11□□□□□ -0.65
COL4A5-208ENST00000505728 NUTM2DQ5VT03 806 aaPredicted RBP11□□□□□ -0.65
COL4A5-208ENST00000505728 PUS7Q96PZ0 661 aaKnown RBP11□□□□□ -0.65
COL4A5-208ENST00000505728 TMEM132EQ6IEE7 984 aa10.99□□□□□ -0.65
COL4A5-208ENST00000505728 PANK3Q9H999 370 aa10.99□□□□□ -0.65
COL4A5-208ENST00000505728 TRAK1Q9UPV9 953 aa10.99□□□□□ -0.65
COL4A5-208ENST00000505728 RIMS2Q9UQ26 1411 aa10.99□□□□□ -0.65
COL4A5-208ENST00000505728 TXNDC2Q86VQ3 553 aa10.98□□□□□ -0.65
COL4A5-208ENST00000505728 TMEM2Q9UHN6 1383 aa10.98□□□□□ -0.65
COL4A5-208ENST00000505728 MSH5O43196 834 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms