RNA–Protein interactions for RNA: ENST00000505690.1

SPOCK1-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-204ENST00000505690 RIMS2Q9UQ26 1411 aa33.59■■■□□ 2.97
SPOCK1-204ENST00000505690 ZNF326Q5BKZ1 582 aaKnown RBP33.57■■■□□ 2.96
SPOCK1-204ENST00000505690 MED14O60244 1454 aa33.56■■■□□ 2.96
SPOCK1-204ENST00000505690 NPHP4O75161 1426 aaPredicted RBP33.54■■■□□ 2.96
SPOCK1-204ENST00000505690 HDGFP51858 240 aaKnown RBP33.54■■■□□ 2.96
SPOCK1-204ENST00000505690 SPATA31E1Q6ZUB1 1445 aa33.53■■■□□ 2.96
SPOCK1-204ENST00000505690 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.52■■■□□ 2.96
SPOCK1-204ENST00000505690 IQGAP1P46940 1657 aa33.5■■■□□ 2.95
SPOCK1-204ENST00000505690 PPP1R15AO75807 674 aaPredicted RBP33.49■■■□□ 2.95
SPOCK1-204ENST00000505690 NEXMIFQ5QGS0 1516 aa33.48■■■□□ 2.95
SPOCK1-204ENST00000505690 NUTM2DQ5VT03 806 aaPredicted RBP33.47■■■□□ 2.95
SPOCK1-204ENST00000505690 RGL3Q3MIN7 710 aa33.46■■■□□ 2.95
SPOCK1-204ENST00000505690 RPGRIP1LQ68CZ1 1315 aa33.46■■■□□ 2.95
SPOCK1-204ENST00000505690 PLEKHG1Q9ULL1 1385 aa33.43■■■□□ 2.94
SPOCK1-204ENST00000505690 PPLO60437 1756 aa33.41■■■□□ 2.94
SPOCK1-204ENST00000505690 BCANQ96GW7 911 aa33.38■■■□□ 2.93
SPOCK1-204ENST00000505690 IFT172Q9UG01 1749 aa33.36■■■□□ 2.93
SPOCK1-204ENST00000505690 VGFO15240 615 aaPredicted RBP33.36■■■□□ 2.93
SPOCK1-204ENST00000505690 SENP3Q9H4L4 574 aaPredicted RBP33.36■■■□□ 2.93
SPOCK1-204ENST00000505690 SLC26A8Q96RN1 970 aa33.32■■■□□ 2.92
SPOCK1-204ENST00000505690 SIN3AQ96ST3 1273 aa33.32■■■□□ 2.92
SPOCK1-204ENST00000505690 SETBP1Q9Y6X0 1596 aa33.3■■■□□ 2.92
SPOCK1-204ENST00000505690 ADAMTS13Q76LX8 1427 aa33.29■■■□□ 2.92
SPOCK1-204ENST00000505690 NRXN3Q9Y4C0 1643 aa33.28■■■□□ 2.92
SPOCK1-204ENST00000505690 ZNF335Q9H4Z2 1342 aaPredicted RBP33.28■■■□□ 2.92
SPOCK1-204ENST00000505690 DIP2AQ14689 1571 aa33.27■■■□□ 2.92
SPOCK1-204ENST00000505690 NEUROD1Q13562 356 aa33.26■■■□□ 2.91
SPOCK1-204ENST00000505690 ADGRF5Q8IZF2 1346 aa33.26■■■□□ 2.91
SPOCK1-204ENST00000505690 MYOM2P54296 1465 aa33.25■■■□□ 2.91
SPOCK1-204ENST00000505690 TBX22Q9Y458 520 aa33.25■■■□□ 2.91
SPOCK1-204ENST00000505690 DCAF11Q8TEB1 546 aa33.22■■■□□ 2.91
SPOCK1-204ENST00000505690 LTBP4Q8N2S1 1624 aa33.2■■■□□ 2.91
SPOCK1-204ENST00000505690 NRXN1Q9ULB1 1477 aa33.18■■■□□ 2.9
SPOCK1-204ENST00000505690 STAC3Q96MF2 364 aa33.18■■■□□ 2.9
SPOCK1-204ENST00000505690 KDM2AQ9Y2K7 1162 aa33.18■■■□□ 2.9
SPOCK1-204ENST00000505690 PIK3C2GO75747 1445 aa33.18■■■□□ 2.9
SPOCK1-204ENST00000505690 ALKQ9UM73 1620 aa33.16■■■□□ 2.9
SPOCK1-204ENST00000505690 STRCP1A6NGW2 1772 aa33.15■■■□□ 2.9
SPOCK1-204ENST00000505690 PIK3R4Q99570 1358 aa33.15■■■□□ 2.9
SPOCK1-204ENST00000505690 CLSPNQ9HAW4 1339 aa33.15■■■□□ 2.9
SPOCK1-204ENST00000505690 CCER1Q8TC90 406 aaPredicted RBP33.14■■■□□ 2.9
SPOCK1-204ENST00000505690 SETD1AO15047 1707 aaKnown RBP33.14■■■□□ 2.89
SPOCK1-204ENST00000505690 CPS1P31327 1500 aa33.13■■■□□ 2.89
SPOCK1-204ENST00000505690 KCNA6P17658 529 aa33.13■■■□□ 2.89
SPOCK1-204ENST00000505690 L3MBTL2Q969R5 705 aa33.12■■■□□ 2.89
SPOCK1-204ENST00000505690 NWD1Q149M9 1564 aa33.12■■■□□ 2.89
SPOCK1-204ENST00000505690 CHD2O14647 1828 aaKnown RBP33.12■■■□□ 2.89
SPOCK1-204ENST00000505690 METP08581 1390 aa33.11■■■□□ 2.89
SPOCK1-204ENST00000505690 PTPRUQ92729 1446 aa33.07■■■□□ 2.88
SPOCK1-204ENST00000505690 TONSLQ96HA7 1378 aa33.07■■■□□ 2.88
SPOCK1-204ENST00000505690 C14orf93Q9H972 538 aaKnown RBP33.06■■■□□ 2.88
SPOCK1-204ENST00000505690 LAMC1P11047 1609 aa33.06■■■□□ 2.88
SPOCK1-204ENST00000505690 CERKQ8TCT0 537 aa33.04■■■□□ 2.88
SPOCK1-204ENST00000505690 NKTRP30414 1462 aaKnown RBP33.04■■■□□ 2.88
SPOCK1-204ENST00000505690 CFAP70Q5T0N1 1121 aa33.03■■■□□ 2.88
SPOCK1-204ENST00000505690 AMOTL2Q9Y2J4 779 aa33.03■■■□□ 2.88
SPOCK1-204ENST00000505690 XRN1Q8IZH2 1706 aaKnown RBP33.01■■■□□ 2.87
SPOCK1-204ENST00000505690 LRRC7Q96NW7 1537 aa33.01■■■□□ 2.87
SPOCK1-204ENST00000505690 PRAG1Q86YV5 1406 aa33.01■■■□□ 2.87
SPOCK1-204ENST00000505690 ASXL1Q8IXJ9 1541 aa33■■■□□ 2.87
SPOCK1-204ENST00000505690 TMEM132EQ6IEE7 984 aa32.96■■■□□ 2.87
SPOCK1-204ENST00000505690 PROSER2Q86WR7 435 aaPredicted RBP32.96■■■□□ 2.87
SPOCK1-204ENST00000505690 IQSEC2Q5JU85 1478 aa32.96■■■□□ 2.87
SPOCK1-204ENST00000505690 KIAA1210Q9ULL0 1709 aa32.92■■■□□ 2.86
SPOCK1-204ENST00000505690 LRPPRCP42704 1394 aaKnown RBP32.92■■■□□ 2.86
SPOCK1-204ENST00000505690 TMEM94Q12767 1356 aa32.92■■■□□ 2.86
SPOCK1-204ENST00000505690 ADGRB1O14514 1584 aa32.91■■■□□ 2.86
SPOCK1-204ENST00000505690 YTHDC2Q9H6S0 1430 aaKnown RBP32.9■■■□□ 2.86
SPOCK1-204ENST00000505690 XIRP1Q702N8 1843 aaKnown RBP32.89■■■□□ 2.86
SPOCK1-204ENST00000505690 PTCH1Q13635 1447 aa32.88■■■□□ 2.85
SPOCK1-204ENST00000505690 RBM33Q96EV2 1170 aaKnown RBP32.88■■■□□ 2.85
SPOCK1-204ENST00000505690 STK26Q9P289 416 aa32.88■■■□□ 2.85
SPOCK1-204ENST00000505690 TIMELESSQ9UNS1 1208 aa32.87■■■□□ 2.85
SPOCK1-204ENST00000505690 KNDC1Q76NI1 1749 aa32.87■■■□□ 2.85
SPOCK1-204ENST00000505690 TECPR2O15040 1411 aa32.86■■■□□ 2.85
SPOCK1-204ENST00000505690 ABCC11Q96J66 1382 aa32.86■■■□□ 2.85
SPOCK1-204ENST00000505690 ROBO2Q9HCK4 1378 aa32.85■■■□□ 2.85
SPOCK1-204ENST00000505690 NCOA3Q9Y6Q9 1424 aa32.84■■■□□ 2.85
SPOCK1-204ENST00000505690 NBPF8Q3BBV2 869 aa32.83■■■□□ 2.85
SPOCK1-204ENST00000505690 TRPM1Q7Z4N2 1603 aa32.83■■■□□ 2.85
SPOCK1-204ENST00000505690 NBPF1Q3BBV0 1214 aa32.81■■■□□ 2.84
SPOCK1-204ENST00000505690 C14orf37Q86TY3 774 aa32.78■■■□□ 2.84
SPOCK1-204ENST00000505690 DLC1Q96QB1 1528 aa32.77■■■□□ 2.84
SPOCK1-204ENST00000505690 MSH6P52701 1360 aa32.76■■■□□ 2.83
SPOCK1-204ENST00000505690 SIRT1Q96EB6 747 aa32.76■■■□□ 2.83
SPOCK1-204ENST00000505690 TRAK1Q9UPV9 953 aa32.75■■■□□ 2.83
SPOCK1-204ENST00000505690 FAM135BQ49AJ0 1406 aa32.75■■■□□ 2.83
SPOCK1-204ENST00000505690 ROCK2O75116 1388 aaKnown RBP32.73■■■□□ 2.83
SPOCK1-204ENST00000505690 WAPLQ7Z5K2 1190 aa32.73■■■□□ 2.83
SPOCK1-204ENST00000505690 PLEKHH1Q9ULM0 1364 aa32.71■■■□□ 2.83
SPOCK1-204ENST00000505690 ADGRL3Q9HAR2 1447 aa32.71■■■□□ 2.83
SPOCK1-204ENST00000505690 UBAP1LF5GYI3 381 aa32.71■■■□□ 2.83
SPOCK1-204ENST00000505690 C19orf44Q9H6X5 657 aa32.71■■■□□ 2.83
SPOCK1-204ENST00000505690 RALGAPBQ86X10 1494 aa32.71■■■□□ 2.83
SPOCK1-204ENST00000505690 NALCNQ8IZF0 1738 aa32.71■■■□□ 2.83
SPOCK1-204ENST00000505690 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.69■■■□□ 2.82
SPOCK1-204ENST00000505690 TOM1O60784 492 aa32.69■■■□□ 2.82
SPOCK1-204ENST00000505690 PRAM1Q96QH2 718 aa32.69■■■□□ 2.82
SPOCK1-204ENST00000505690 ARHGEF28Q8N1W1 1705 aaKnown RBP32.68■■■□□ 2.82
SPOCK1-204ENST00000505690 GPRASP1Q5JY77 1395 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms