RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 ADGRL2O95490 1459 aa26.31■■□□□ 1.8
DDR1-257ENST00000505534 RPRD2Q5VT52 1461 aaKnown RBP26.3■■□□□ 1.8
DDR1-257ENST00000505534 MSH6P52701 1360 aa26.3■■□□□ 1.8
DDR1-257ENST00000505534 MYO5BQ9ULV0 1848 aa26.3■■□□□ 1.8
DDR1-257ENST00000505534 POTEAQ6S8J7 498 aa26.29■■□□□ 1.8
DDR1-257ENST00000505534 CHD2O14647 1828 aaKnown RBP26.29■■□□□ 1.8
DDR1-257ENST00000505534 HDGFP51858 240 aaKnown RBP26.27■■□□□ 1.8
DDR1-257ENST00000505534 SLAIN2Q9P270 581 aa26.27■■□□□ 1.8
DDR1-257ENST00000505534 ZFYVE9O95405 1425 aa26.25■■□□□ 1.79
DDR1-257ENST00000505534 PLEKHG1Q9ULL1 1385 aa26.25■■□□□ 1.79
DDR1-257ENST00000505534 PHLPP1O60346 1717 aa26.25■■□□□ 1.79
DDR1-257ENST00000505534 ANKRD50Q9ULJ7 1429 aa26.24■■□□□ 1.79
DDR1-257ENST00000505534 GCC2Q8IWJ2 1684 aa26.23■■□□□ 1.79
DDR1-257ENST00000505534 PPP1R15AO75807 674 aaPredicted RBP26.22■■□□□ 1.79
DDR1-257ENST00000505534 RIMS2Q9UQ26 1411 aa26.22■■□□□ 1.79
DDR1-257ENST00000505534 FAM50AQ14320 339 aaKnown RBP26.21■■□□□ 1.79
DDR1-257ENST00000505534 TMEM131LA2VDJ0 1609 aa26.21■■□□□ 1.79
DDR1-257ENST00000505534 TBX22Q9Y458 520 aa26.2■■□□□ 1.78
DDR1-257ENST00000505534 JCADQ9P266 1359 aa26.2■■□□□ 1.78
DDR1-257ENST00000505534 NCOA3Q9Y6Q9 1424 aa26.18■■□□□ 1.78
DDR1-257ENST00000505534 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.17■■□□□ 1.78
DDR1-257ENST00000505534 UNC13BO14795 1591 aa26.12■■□□□ 1.77
DDR1-257ENST00000505534 CHGAP10645 457 aaKnown RBP26.12■■□□□ 1.77
DDR1-257ENST00000505534 COL16A1Q07092 1604 aaPredicted RBP26.12■■□□□ 1.77
DDR1-257ENST00000505534 E9PCH4 1651 aa26.1■■□□□ 1.77
DDR1-257ENST00000505534 C14orf37Q86TY3 774 aa26.1■■□□□ 1.77
DDR1-257ENST00000505534 PIK3R4Q99570 1358 aa26.09■■□□□ 1.77
DDR1-257ENST00000505534 DIP2AQ14689 1571 aa26.09■■□□□ 1.77
DDR1-257ENST00000505534 ADAMTS13Q76LX8 1427 aa26.09■■□□□ 1.77
DDR1-257ENST00000505534 CADPS2Q86UW7 1296 aa26.09■■□□□ 1.77
DDR1-257ENST00000505534 C19orf44Q9H6X5 657 aa26.09■■□□□ 1.77
DDR1-257ENST00000505534 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.08■■□□□ 1.77
DDR1-257ENST00000505534 SPATA31A6Q5VVP1 1343 aa26.08■■□□□ 1.77
DDR1-257ENST00000505534 SETD1AO15047 1707 aaKnown RBP26.07■■□□□ 1.76
DDR1-257ENST00000505534 ATF3P18847 181 aa26.05■■□□□ 1.76
DDR1-257ENST00000505534 NUTM2DQ5VT03 806 aaPredicted RBP26.05■■□□□ 1.76
DDR1-257ENST00000505534 AHDC1Q5TGY3 1603 aaPredicted RBP26.03■■□□□ 1.76
DDR1-257ENST00000505534 IQGAP3Q86VI3 1631 aa26.03■■□□□ 1.76
DDR1-257ENST00000505534 ROCK1Q13464 1354 aa26.02■■□□□ 1.76
DDR1-257ENST00000505534 LRP6O75581 1613 aa26.01■■□□□ 1.75
DDR1-257ENST00000505534 SHPRHQ149N8 1683 aa26.01■■□□□ 1.75
DDR1-257ENST00000505534 MEX3CQ5U5Q3 659 aaKnown RBP26.01■■□□□ 1.75
DDR1-257ENST00000505534 ZNF772Q68DY9 489 aaPredicted RBP26.01■■□□□ 1.75
DDR1-257ENST00000505534 TRPM2O94759 1503 aa26■■□□□ 1.75
DDR1-257ENST00000505534 AMOTL2Q9Y2J4 779 aa25.99■■□□□ 1.75
DDR1-257ENST00000505534 NUP155O75694 1391 aa25.96■■□□□ 1.75
DDR1-257ENST00000505534 PTPRUQ92729 1446 aa25.96■■□□□ 1.75
DDR1-257ENST00000505534 BRINP3Q76B58 766 aa25.95■■□□□ 1.74
DDR1-257ENST00000505534 DCCP43146 1447 aa25.93■■□□□ 1.74
DDR1-257ENST00000505534 TRIM52Q96A61 297 aa25.9■■□□□ 1.74
DDR1-257ENST00000505534 NRXN3Q9Y4C0 1643 aa25.89■■□□□ 1.74
DDR1-257ENST00000505534 XRN1Q8IZH2 1706 aaKnown RBP25.89■■□□□ 1.74
DDR1-257ENST00000505534 UPF1Q92900 1129 aaKnown RBP eCLIP25.89■■□□□ 1.74
DDR1-257ENST00000505534 SETBP1Q9Y6X0 1596 aa25.89■■□□□ 1.73
DDR1-257ENST00000505534 RXRBP28702 533 aa25.88■■□□□ 1.73
DDR1-257ENST00000505534 SPHKAPQ2M3C7 1700 aa25.87■■□□□ 1.73
DDR1-257ENST00000505534 NUTM2BA6NNL0 878 aaPredicted RBP25.86■■□□□ 1.73
DDR1-257ENST00000505534 NUTM2EB1AL46 878 aaPredicted RBP25.86■■□□□ 1.73
DDR1-257ENST00000505534 NUTM2AQ8IVF1 878 aaPredicted RBP25.86■■□□□ 1.73
DDR1-257ENST00000505534 ASXL1Q8IXJ9 1541 aa25.86■■□□□ 1.73
DDR1-257ENST00000505534 SETD5Q9C0A6 1442 aa25.85■■□□□ 1.73
DDR1-257ENST00000505534 MST1RQ04912 1400 aa25.84■■□□□ 1.73
DDR1-257ENST00000505534 ZNF326Q5BKZ1 582 aaKnown RBP25.84■■□□□ 1.73
DDR1-257ENST00000505534 NHSL1Q5SYE7 1610 aa25.84■■□□□ 1.73
DDR1-257ENST00000505534 ITGAEP38570 1179 aa25.83■■□□□ 1.73
DDR1-257ENST00000505534 LRRC59Q96AG4 307 aaKnown RBP25.82■■□□□ 1.72
DDR1-257ENST00000505534 CDK12Q9NYV4 1490 aaPredicted RBP25.82■■□□□ 1.72
DDR1-257ENST00000505534 METP08581 1390 aa25.81■■□□□ 1.72
DDR1-257ENST00000505534 AFF2P51816 1311 aa25.8■■□□□ 1.72
DDR1-257ENST00000505534 ADGRL3Q9HAR2 1447 aa25.77■■□□□ 1.72
DDR1-257ENST00000505534 KIF1BO60333 1816 aa25.74■■□□□ 1.71
DDR1-257ENST00000505534 NEXMIFQ5QGS0 1516 aa25.73■■□□□ 1.71
DDR1-257ENST00000505534 NALCNQ8IZF0 1738 aa25.73■■□□□ 1.71
DDR1-257ENST00000505534 PNPLA6Q8IY17 1366 aa25.72■■□□□ 1.71
DDR1-257ENST00000505534 DDX17Q92841 729 aaKnown RBP25.72■■□□□ 1.71
DDR1-257ENST00000505534 C8orf37Q96NL8 207 aa25.72■■□□□ 1.71
DDR1-257ENST00000505534 CLTCL1P53675 1640 aa25.72■■□□□ 1.71
DDR1-257ENST00000505534 QTRT2Q9H974 415 aaKnown RBP25.71■■□□□ 1.71
DDR1-257ENST00000505534 RBM6P78332 1123 aaKnown RBP25.7■■□□□ 1.7
DDR1-257ENST00000505534 C1orf167Q5SNV9 1468 aa25.67■■□□□ 1.7
DDR1-257ENST00000505534 LAMC1P11047 1609 aa25.66■■□□□ 1.7
DDR1-257ENST00000505534 RGS12O14924 1447 aa25.64■■□□□ 1.7
DDR1-257ENST00000505534 VGFO15240 615 aaPredicted RBP25.64■■□□□ 1.7
DDR1-257ENST00000505534 NGLY1Q96IV0 654 aa25.64■■□□□ 1.7
DDR1-257ENST00000505534 PTCH1Q13635 1447 aa25.63■■□□□ 1.69
DDR1-257ENST00000505534 PPARGC1BQ86YN6 1023 aaKnown RBP25.63■■□□□ 1.69
DDR1-257ENST00000505534 SOS2Q07890 1332 aaPredicted RBP25.62■■□□□ 1.69
DDR1-257ENST00000505534 ADAMTS2O95450 1211 aa25.61■■□□□ 1.69
DDR1-257ENST00000505534 ROBO2Q9HCK4 1378 aa25.59■■□□□ 1.69
DDR1-257ENST00000505534 ORAI2Q96SN7 254 aa25.59■■□□□ 1.69
DDR1-257ENST00000505534 RPGRIP1LQ68CZ1 1315 aa25.58■■□□□ 1.69
DDR1-257ENST00000505534 NAIPQ13075 1403 aa25.57■■□□□ 1.68
DDR1-257ENST00000505534 PRAG1Q86YV5 1406 aa25.57■■□□□ 1.68
DDR1-257ENST00000505534 USP21Q9UK80 565 aa25.55■■□□□ 1.68
DDR1-257ENST00000505534 TRPC5Q9UL62 973 aaPredicted RBP25.54■■□□□ 1.68
DDR1-257ENST00000505534 HFM1A2PYH4 1435 aa25.54■■□□□ 1.68
DDR1-257ENST00000505534 FNBP4Q8N3X1 1017 aaPredicted RBP25.53■■□□□ 1.68
DDR1-257ENST00000505534 PPLO60437 1756 aa25.53■■□□□ 1.68
DDR1-257ENST00000505534 RRBP1Q9P2E9 1410 aaKnown RBP25.52■■□□□ 1.68
DDR1-257ENST00000505534 ATAD2Q6PL18 1390 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms