RNA–Protein interactions for RNA: ENST00000505377.1

COL25A1-205, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 448 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-205ENST00000505377 MSH6P52701 1360 aa18.86■□□□□ 0.61
COL25A1-205ENST00000505377 NKTRP30414 1462 aaKnown RBP18.85■□□□□ 0.61
COL25A1-205ENST00000505377 SLC52A1Q9NWF4 448 aa18.84■□□□□ 0.61
COL25A1-205ENST00000505377 ZFYVE9O95405 1425 aa18.83■□□□□ 0.61
COL25A1-205ENST00000505377 PHLPP1O60346 1717 aa18.83■□□□□ 0.61
COL25A1-205ENST00000505377 JCADQ9P266 1359 aa18.82■□□□□ 0.6
COL25A1-205ENST00000505377 NUTM2DQ5VT03 806 aaPredicted RBP18.82■□□□□ 0.6
COL25A1-205ENST00000505377 MYO5BQ9ULV0 1848 aa18.81■□□□□ 0.6
COL25A1-205ENST00000505377 APLP2Q06481 763 aa18.81■□□□□ 0.6
COL25A1-205ENST00000505377 RIMS2Q9UQ26 1411 aa18.81■□□□□ 0.6
COL25A1-205ENST00000505377 PLEKHG1Q9ULL1 1385 aa18.81■□□□□ 0.6
COL25A1-205ENST00000505377 PPP1R15AO75807 674 aaPredicted RBP18.8■□□□□ 0.6
COL25A1-205ENST00000505377 CHD2O14647 1828 aaKnown RBP18.79■□□□□ 0.6
COL25A1-205ENST00000505377 LRP6O75581 1613 aa18.79■□□□□ 0.6
COL25A1-205ENST00000505377 COL16A1Q07092 1604 aaPredicted RBP18.78■□□□□ 0.6
COL25A1-205ENST00000505377 CHGAP10645 457 aaKnown RBP18.77■□□□□ 0.6
COL25A1-205ENST00000505377 FAM50AQ14320 339 aaKnown RBP18.77■□□□□ 0.6
COL25A1-205ENST00000505377 TBX22Q9Y458 520 aa18.77■□□□□ 0.6
COL25A1-205ENST00000505377 ADGRL2O95490 1459 aa18.77■□□□□ 0.59
COL25A1-205ENST00000505377 ANKRD50Q9ULJ7 1429 aa18.76■□□□□ 0.59
COL25A1-205ENST00000505377 C14orf37Q86TY3 774 aa18.76■□□□□ 0.59
COL25A1-205ENST00000505377 TMEM131LA2VDJ0 1609 aa18.75■□□□□ 0.59
COL25A1-205ENST00000505377 GCC2Q8IWJ2 1684 aa18.75■□□□□ 0.59
COL25A1-205ENST00000505377 ADAMTS13Q76LX8 1427 aa18.74■□□□□ 0.59
COL25A1-205ENST00000505377 RPRD2Q5VT52 1461 aaKnown RBP18.74■□□□□ 0.59
COL25A1-205ENST00000505377 TRIM52Q96A61 297 aa18.74■□□□□ 0.59
COL25A1-205ENST00000505377 MEX3CQ5U5Q3 659 aaKnown RBP18.73■□□□□ 0.59
COL25A1-205ENST00000505377 UPF1Q92900 1129 aaKnown RBP eCLIP18.72■□□□□ 0.59
COL25A1-205ENST00000505377 HDGFP51858 240 aaKnown RBP18.71■□□□□ 0.59
COL25A1-205ENST00000505377 SPATA31A6Q5VVP1 1343 aa18.71■□□□□ 0.59
COL25A1-205ENST00000505377 C19orf44Q9H6X5 657 aa18.7■□□□□ 0.58
COL25A1-205ENST00000505377 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.7■□□□□ 0.58
COL25A1-205ENST00000505377 PTPRUQ92729 1446 aa18.69■□□□□ 0.58
COL25A1-205ENST00000505377 NCOA3Q9Y6Q9 1424 aa18.69■□□□□ 0.58
COL25A1-205ENST00000505377 ATF3P18847 181 aa18.69■□□□□ 0.58
COL25A1-205ENST00000505377 CADPS2Q86UW7 1296 aa18.69■□□□□ 0.58
COL25A1-205ENST00000505377 NUTM2BA6NNL0 878 aaPredicted RBP18.68■□□□□ 0.58
COL25A1-205ENST00000505377 NUTM2EB1AL46 878 aaPredicted RBP18.68■□□□□ 0.58
COL25A1-205ENST00000505377 ZNF772Q68DY9 489 aaPredicted RBP18.68■□□□□ 0.58
COL25A1-205ENST00000505377 BRINP3Q76B58 766 aa18.68■□□□□ 0.58
COL25A1-205ENST00000505377 NUTM2AQ8IVF1 878 aaPredicted RBP18.68■□□□□ 0.58
COL25A1-205ENST00000505377 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.68■□□□□ 0.58
COL25A1-205ENST00000505377 AMOTL2Q9Y2J4 779 aa18.68■□□□□ 0.58
COL25A1-205ENST00000505377 AHDC1Q5TGY3 1603 aaPredicted RBP18.67■□□□□ 0.58
COL25A1-205ENST00000505377 E9PCH4 1651 aa18.65■□□□□ 0.58
COL25A1-205ENST00000505377 SHPRHQ149N8 1683 aa18.63■□□□□ 0.57
COL25A1-205ENST00000505377 RXRBP28702 533 aa18.63■□□□□ 0.57
COL25A1-205ENST00000505377 PIK3R4Q99570 1358 aa18.63■□□□□ 0.57
COL25A1-205ENST00000505377 UNC13BO14795 1591 aa18.63■□□□□ 0.57
COL25A1-205ENST00000505377 DIP2AQ14689 1571 aa18.63■□□□□ 0.57
COL25A1-205ENST00000505377 DDX17Q92841 729 aaKnown RBP18.62■□□□□ 0.57
COL25A1-205ENST00000505377 AFF2P51816 1311 aa18.6■□□□□ 0.57
COL25A1-205ENST00000505377 TRPM2O94759 1503 aa18.59■□□□□ 0.57
COL25A1-205ENST00000505377 NUP155O75694 1391 aa18.58■□□□□ 0.57
COL25A1-205ENST00000505377 ASXL1Q8IXJ9 1541 aa18.58■□□□□ 0.56
COL25A1-205ENST00000505377 MST1RQ04912 1400 aa18.57■□□□□ 0.56
COL25A1-205ENST00000505377 METP08581 1390 aa18.56■□□□□ 0.56
COL25A1-205ENST00000505377 NRXN3Q9Y4C0 1643 aa18.56■□□□□ 0.56
COL25A1-205ENST00000505377 IQGAP3Q86VI3 1631 aa18.56■□□□□ 0.56
COL25A1-205ENST00000505377 ITGAEP38570 1179 aa18.55■□□□□ 0.56
COL25A1-205ENST00000505377 SETD5Q9C0A6 1442 aa18.55■□□□□ 0.56
COL25A1-205ENST00000505377 C8orf37Q96NL8 207 aa18.54■□□□□ 0.56
COL25A1-205ENST00000505377 XRN1Q8IZH2 1706 aaKnown RBP18.54■□□□□ 0.56
COL25A1-205ENST00000505377 ROCK1Q13464 1354 aa18.54■□□□□ 0.56
COL25A1-205ENST00000505377 DCCP43146 1447 aa18.53■□□□□ 0.56
COL25A1-205ENST00000505377 CDK12Q9NYV4 1490 aaPredicted RBP18.52■□□□□ 0.56
COL25A1-205ENST00000505377 ZNF326Q5BKZ1 582 aaKnown RBP18.52■□□□□ 0.56
COL25A1-205ENST00000505377 QTRT2Q9H974 415 aaKnown RBP18.52■□□□□ 0.56
COL25A1-205ENST00000505377 RGS12O14924 1447 aa18.51■□□□□ 0.55
COL25A1-205ENST00000505377 LRRC59Q96AG4 307 aaKnown RBP18.51■□□□□ 0.55
COL25A1-205ENST00000505377 NHSL1Q5SYE7 1610 aa18.51■□□□□ 0.55
COL25A1-205ENST00000505377 PNPLA6Q8IY17 1366 aa18.51■□□□□ 0.55
COL25A1-205ENST00000505377 SETBP1Q9Y6X0 1596 aa18.51■□□□□ 0.55
COL25A1-205ENST00000505377 ADAMTS2O95450 1211 aa18.49■□□□□ 0.55
COL25A1-205ENST00000505377 RBM6P78332 1123 aaKnown RBP18.48■□□□□ 0.55
COL25A1-205ENST00000505377 ADGRL3Q9HAR2 1447 aa18.48■□□□□ 0.55
COL25A1-205ENST00000505377 SRCAPQ6ZRS2 3230 aa18.47■□□□□ 0.55
COL25A1-205ENST00000505377 PPARGC1BQ86YN6 1023 aaKnown RBP18.47■□□□□ 0.55
COL25A1-205ENST00000505377 NGLY1Q96IV0 654 aa18.45■□□□□ 0.54
COL25A1-205ENST00000505377 NALCNQ8IZF0 1738 aa18.44■□□□□ 0.54
COL25A1-205ENST00000505377 ORAI2Q96SN7 254 aa18.44■□□□□ 0.54
COL25A1-205ENST00000505377 C1orf167Q5SNV9 1468 aa18.44■□□□□ 0.54
COL25A1-205ENST00000505377 SPHKAPQ2M3C7 1700 aa18.43■□□□□ 0.54
COL25A1-205ENST00000505377 NEXMIFQ5QGS0 1516 aa18.42■□□□□ 0.54
COL25A1-205ENST00000505377 CLTCL1P53675 1640 aa18.41■□□□□ 0.54
COL25A1-205ENST00000505377 ROBO2Q9HCK4 1378 aa18.41■□□□□ 0.54
COL25A1-205ENST00000505377 SOS2Q07890 1332 aaPredicted RBP18.39■□□□□ 0.53
COL25A1-205ENST00000505377 USP21Q9UK80 565 aa18.38■□□□□ 0.53
COL25A1-205ENST00000505377 FNBP4Q8N3X1 1017 aaPredicted RBP18.34■□□□□ 0.53
COL25A1-205ENST00000505377 TRPC5Q9UL62 973 aaPredicted RBP18.34■□□□□ 0.53
COL25A1-205ENST00000505377 LAMC1P11047 1609 aa18.34■□□□□ 0.53
COL25A1-205ENST00000505377 PTCH1Q13635 1447 aa18.33■□□□□ 0.53
COL25A1-205ENST00000505377 ATAD2Q6PL18 1390 aa18.33■□□□□ 0.53
COL25A1-205ENST00000505377 ATRNO75882 1429 aa18.32■□□□□ 0.52
COL25A1-205ENST00000505377 XPCQ01831 940 aaPredicted RBP18.32■□□□□ 0.52
COL25A1-205ENST00000505377 VGFO15240 615 aaPredicted RBP18.3■□□□□ 0.52
COL25A1-205ENST00000505377 KIF1BO60333 1816 aa18.29■□□□□ 0.52
COL25A1-205ENST00000505377 ESCO1Q5FWF5 840 aa18.29■□□□□ 0.52
COL25A1-205ENST00000505377 MYOM2P54296 1465 aa18.28■□□□□ 0.52
COL25A1-205ENST00000505377 BCL9LQ86UU0 1499 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms