RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 SENP3Q9H4L4 574 aaPredicted RBP30.43■■■□□ 2.46
UBE2D3-220ENST00000505307 ZFYVE9O95405 1425 aa30.42■■■□□ 2.46
UBE2D3-220ENST00000505307 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.41■■■□□ 2.46
UBE2D3-220ENST00000505307 PLEKHG1Q9ULL1 1385 aa30.41■■■□□ 2.46
UBE2D3-220ENST00000505307 RIMS2Q9UQ26 1411 aa30.4■■■□□ 2.46
UBE2D3-220ENST00000505307 E9PCH4 1651 aa30.4■■■□□ 2.46
UBE2D3-220ENST00000505307 PPP1R15AO75807 674 aaPredicted RBP30.4■■■□□ 2.46
UBE2D3-220ENST00000505307 TMEM131LA2VDJ0 1609 aa30.4■■■□□ 2.46
UBE2D3-220ENST00000505307 TMEM94Q12767 1356 aa30.38■■■□□ 2.45
UBE2D3-220ENST00000505307 PROSER2Q86WR7 435 aaPredicted RBP30.37■■■□□ 2.45
UBE2D3-220ENST00000505307 CHGAP10645 457 aaKnown RBP30.36■■■□□ 2.45
UBE2D3-220ENST00000505307 NKTRP30414 1462 aaKnown RBP30.36■■■□□ 2.45
UBE2D3-220ENST00000505307 RRBP1Q9P2E9 1410 aaKnown RBP30.35■■■□□ 2.45
UBE2D3-220ENST00000505307 XIRP1Q702N8 1843 aaKnown RBP30.35■■■□□ 2.45
UBE2D3-220ENST00000505307 TBX22Q9Y458 520 aa30.33■■■□□ 2.45
UBE2D3-220ENST00000505307 MYO5BQ9ULV0 1848 aa30.33■■■□□ 2.45
UBE2D3-220ENST00000505307 NWD1Q149M9 1564 aa30.32■■■□□ 2.45
UBE2D3-220ENST00000505307 MED1Q15648 1581 aaPredicted RBP30.31■■■□□ 2.44
UBE2D3-220ENST00000505307 FAM135BQ49AJ0 1406 aa30.3■■■□□ 2.44
UBE2D3-220ENST00000505307 MSH6P52701 1360 aa30.24■■■□□ 2.43
UBE2D3-220ENST00000505307 RBM33Q96EV2 1170 aaKnown RBP30.23■■■□□ 2.43
UBE2D3-220ENST00000505307 PIK3R4Q99570 1358 aa30.23■■■□□ 2.43
UBE2D3-220ENST00000505307 CHD2O14647 1828 aaKnown RBP30.22■■■□□ 2.43
UBE2D3-220ENST00000505307 DIP2AQ14689 1571 aa30.22■■■□□ 2.43
UBE2D3-220ENST00000505307 NAIPQ13075 1403 aa30.21■■■□□ 2.43
UBE2D3-220ENST00000505307 NCOA3Q9Y6Q9 1424 aa30.21■■■□□ 2.43
UBE2D3-220ENST00000505307 ADAMTS13Q76LX8 1427 aa30.2■■■□□ 2.42
UBE2D3-220ENST00000505307 NUTM2DQ5VT03 806 aaPredicted RBP30.19■■■□□ 2.42
UBE2D3-220ENST00000505307 PHF23Q9BUL5 403 aaPredicted RBP30.19■■■□□ 2.42
UBE2D3-220ENST00000505307 SPHKAPQ2M3C7 1700 aa30.17■■■□□ 2.42
UBE2D3-220ENST00000505307 SLAIN2Q9P270 581 aa30.14■■■□□ 2.42
UBE2D3-220ENST00000505307 ZNF326Q5BKZ1 582 aaKnown RBP30.12■■■□□ 2.41
UBE2D3-220ENST00000505307 HFM1A2PYH4 1435 aa30.12■■■□□ 2.41
UBE2D3-220ENST00000505307 TRPM2O94759 1503 aa30.12■■■□□ 2.41
UBE2D3-220ENST00000505307 ROBO1Q9Y6N7 1651 aa30.11■■■□□ 2.41
UBE2D3-220ENST00000505307 C14orf37Q86TY3 774 aa30.09■■■□□ 2.41
UBE2D3-220ENST00000505307 TRIM52Q96A61 297 aa30.07■■■□□ 2.4
UBE2D3-220ENST00000505307 C19orf44Q9H6X5 657 aa30.07■■■□□ 2.4
UBE2D3-220ENST00000505307 AMOTL2Q9Y2J4 779 aa30.07■■■□□ 2.4
UBE2D3-220ENST00000505307 CADPS2Q86UW7 1296 aa30.05■■■□□ 2.4
UBE2D3-220ENST00000505307 SETBP1Q9Y6X0 1596 aa30.05■■■□□ 2.4
UBE2D3-220ENST00000505307 ATF3P18847 181 aa30.02■■■□□ 2.4
UBE2D3-220ENST00000505307 CLTCL1P53675 1640 aa30.02■■■□□ 2.4
UBE2D3-220ENST00000505307 PTPRUQ92729 1446 aa30.01■■■□□ 2.39
UBE2D3-220ENST00000505307 SLC4A1APQ9BWU0 796 aaKnown RBP30■■■□□ 2.39
UBE2D3-220ENST00000505307 NRXN3Q9Y4C0 1643 aa29.98■■■□□ 2.39
UBE2D3-220ENST00000505307 NEXMIFQ5QGS0 1516 aa29.96■■■□□ 2.39
UBE2D3-220ENST00000505307 KIF1BO60333 1816 aa29.96■■■□□ 2.39
UBE2D3-220ENST00000505307 VGFO15240 615 aaPredicted RBP29.95■■■□□ 2.39
UBE2D3-220ENST00000505307 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.95■■■□□ 2.38
UBE2D3-220ENST00000505307 DCCP43146 1447 aa29.94■■■□□ 2.38
UBE2D3-220ENST00000505307 RPGRIP1LQ68CZ1 1315 aa29.94■■■□□ 2.38
UBE2D3-220ENST00000505307 METP08581 1390 aa29.93■■■□□ 2.38
UBE2D3-220ENST00000505307 JCADQ9P266 1359 aa29.93■■■□□ 2.38
UBE2D3-220ENST00000505307 PHLPP1O60346 1717 aa29.93■■■□□ 2.38
UBE2D3-220ENST00000505307 XRN1Q8IZH2 1706 aaKnown RBP29.93■■■□□ 2.38
UBE2D3-220ENST00000505307 RGS17Q9UGC6 210 aaPredicted RBP29.9■■■□□ 2.38
UBE2D3-220ENST00000505307 ACIN1Q9UKV3 1341 aaKnown RBP29.87■■■□□ 2.37
UBE2D3-220ENST00000505307 COL16A1Q07092 1604 aaPredicted RBP29.84■■■□□ 2.37
UBE2D3-220ENST00000505307 AHDC1Q5TGY3 1603 aaPredicted RBP29.84■■■□□ 2.37
UBE2D3-220ENST00000505307 BRINP3Q76B58 766 aa29.82■■■□□ 2.36
UBE2D3-220ENST00000505307 SPATA31A6Q5VVP1 1343 aa29.81■■■□□ 2.36
UBE2D3-220ENST00000505307 ADGRL3Q9HAR2 1447 aa29.8■■■□□ 2.36
UBE2D3-220ENST00000505307 MPHOSPH9Q99550 1183 aa29.78■■■□□ 2.36
UBE2D3-220ENST00000505307 CCDC144AA2RUR9 1427 aa29.78■■■□□ 2.36
UBE2D3-220ENST00000505307 MST1RQ04912 1400 aa29.78■■■□□ 2.36
UBE2D3-220ENST00000505307 PTCH1Q13635 1447 aa29.77■■■□□ 2.36
UBE2D3-220ENST00000505307 FOXD1Q16676 465 aa29.76■■■□□ 2.35
UBE2D3-220ENST00000505307 PRAG1Q86YV5 1406 aa29.74■■■□□ 2.35
UBE2D3-220ENST00000505307 POTEAQ6S8J7 498 aa29.74■■■□□ 2.35
UBE2D3-220ENST00000505307 ASXL1Q8IXJ9 1541 aa29.73■■■□□ 2.35
UBE2D3-220ENST00000505307 PPLO60437 1756 aa29.72■■■□□ 2.35
UBE2D3-220ENST00000505307 SETD1AO15047 1707 aaKnown RBP29.71■■■□□ 2.35
UBE2D3-220ENST00000505307 SHPRHQ149N8 1683 aa29.69■■■□□ 2.34
UBE2D3-220ENST00000505307 ANKRD30BQ9BXX2 1392 aa29.69■■■□□ 2.34
UBE2D3-220ENST00000505307 ROBO2Q9HCK4 1378 aa29.69■■■□□ 2.34
UBE2D3-220ENST00000505307 SPATA31E1Q6ZUB1 1445 aa29.68■■■□□ 2.34
UBE2D3-220ENST00000505307 SETD5Q9C0A6 1442 aa29.68■■■□□ 2.34
UBE2D3-220ENST00000505307 NALCNQ8IZF0 1738 aa29.68■■■□□ 2.34
UBE2D3-220ENST00000505307 MEX3CQ5U5Q3 659 aaKnown RBP29.67■■■□□ 2.34
UBE2D3-220ENST00000505307 LRRC59Q96AG4 307 aaKnown RBP29.67■■■□□ 2.34
UBE2D3-220ENST00000505307 RGL3Q3MIN7 710 aa29.66■■■□□ 2.34
UBE2D3-220ENST00000505307 LRP6O75581 1613 aa29.64■■■□□ 2.34
UBE2D3-220ENST00000505307 NHSL1Q5SYE7 1610 aa29.63■■■□□ 2.33
UBE2D3-220ENST00000505307 C1orf167Q5SNV9 1468 aa29.63■■■□□ 2.33
UBE2D3-220ENST00000505307 ZNF772Q68DY9 489 aaPredicted RBP29.63■■■□□ 2.33
UBE2D3-220ENST00000505307 ADGRF5Q8IZF2 1346 aa29.63■■■□□ 2.33
UBE2D3-220ENST00000505307 NUTM2BA6NNL0 878 aaPredicted RBP29.56■■■□□ 2.32
UBE2D3-220ENST00000505307 NUTM2EB1AL46 878 aaPredicted RBP29.56■■■□□ 2.32
UBE2D3-220ENST00000505307 NUTM2AQ8IVF1 878 aaPredicted RBP29.56■■■□□ 2.32
UBE2D3-220ENST00000505307 TECPR2O15040 1411 aa29.54■■■□□ 2.32
UBE2D3-220ENST00000505307 IFT172Q9UG01 1749 aa29.54■■■□□ 2.32
UBE2D3-220ENST00000505307 LRPPRCP42704 1394 aaKnown RBP29.54■■■□□ 2.32
UBE2D3-220ENST00000505307 PIK3C2GO75747 1445 aa29.54■■■□□ 2.32
UBE2D3-220ENST00000505307 ABCC11Q96J66 1382 aa29.53■■■□□ 2.32
UBE2D3-220ENST00000505307 DDX17Q92841 729 aaKnown RBP29.53■■■□□ 2.32
UBE2D3-220ENST00000505307 ORAI2Q96SN7 254 aa29.52■■■□□ 2.32
UBE2D3-220ENST00000505307 LAMC1P11047 1609 aa29.52■■■□□ 2.32
UBE2D3-220ENST00000505307 PNPLA6Q8IY17 1366 aa29.52■■■□□ 2.32
UBE2D3-220ENST00000505307 RAB3GAP2Q9H2M9 1393 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms