RNA–Protein interactions for RNA: ENST00000505225.1

RERE-216, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-216ENST00000505225 XRN1Q8IZH2 1706 aaKnown RBP11.08□□□□□ -0.64
RERE-216ENST00000505225 NHSL1Q5SYE7 1610 aa11.07□□□□□ -0.64
RERE-216ENST00000505225 LRP6O75581 1613 aa11.06□□□□□ -0.64
RERE-216ENST00000505225 TXNDC2Q86VQ3 553 aa11.05□□□□□ -0.64
RERE-216ENST00000505225 SPHKAPQ2M3C7 1700 aa11.04□□□□□ -0.64
RERE-216ENST00000505225 KANK1Q14678 1352 aa11.03□□□□□ -0.64
RERE-216ENST00000505225 PLEKHG1Q9ULL1 1385 aa11.03□□□□□ -0.64
RERE-216ENST00000505225 NALCNQ8IZF0 1738 aa11.02□□□□□ -0.65
RERE-216ENST00000505225 KCNA6P17658 529 aa11.02□□□□□ -0.65
RERE-216ENST00000505225 POTEAQ6S8J7 498 aa11.02□□□□□ -0.65
RERE-216ENST00000505225 LAMC1P11047 1609 aa11.02□□□□□ -0.65
RERE-216ENST00000505225 ANKRD30AQ9BXX3 1397 aa11.02□□□□□ -0.65
RERE-216ENST00000505225 ADAMTS13Q76LX8 1427 aa11.01□□□□□ -0.65
RERE-216ENST00000505225 IDI1Q13907 227 aa11.01□□□□□ -0.65
RERE-216ENST00000505225 SENP3Q9H4L4 574 aaPredicted RBP11.01□□□□□ -0.65
RERE-216ENST00000505225 EID1Q9Y6B2 187 aa11.01□□□□□ -0.65
RERE-216ENST00000505225 NCOA3Q9Y6Q9 1424 aa11.01□□□□□ -0.65
RERE-216ENST00000505225 TRPM2O94759 1503 aa11□□□□□ -0.65
RERE-216ENST00000505225 SETBP1Q9Y6X0 1596 aa11□□□□□ -0.65
RERE-216ENST00000505225 RRP7BPQ9NSQ0 103 aa11□□□□□ -0.65
RERE-216ENST00000505225 MSH6P52701 1360 aa10.99□□□□□ -0.65
RERE-216ENST00000505225 ANKRD50Q9ULJ7 1429 aa10.99□□□□□ -0.65
RERE-216ENST00000505225 RIMS2Q9UQ26 1411 aa10.99□□□□□ -0.65
RERE-216ENST00000505225 JCADQ9P266 1359 aa10.98□□□□□ -0.65
RERE-216ENST00000505225 SLC26A8Q96RN1 970 aa10.97□□□□□ -0.65
RERE-216ENST00000505225 ASXL1Q8IXJ9 1541 aa10.97□□□□□ -0.65
RERE-216ENST00000505225 DCCP43146 1447 aa10.96□□□□□ -0.65
RERE-216ENST00000505225 CDK12Q9NYV4 1490 aaPredicted RBP10.95□□□□□ -0.66
RERE-216ENST00000505225 PTPRUQ92729 1446 aa10.95□□□□□ -0.66
RERE-216ENST00000505225 PIK3R4Q99570 1358 aa10.95□□□□□ -0.66
RERE-216ENST00000505225 RBM33Q96EV2 1170 aaKnown RBP10.95□□□□□ -0.66
RERE-216ENST00000505225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.95□□□□□ -0.662e-7■■□□□ 12.2
RERE-216ENST00000505225 SLC52A1Q9NWF4 448 aa10.95□□□□□ -0.66
RERE-216ENST00000505225 CLTCL1P53675 1640 aa10.94□□□□□ -0.66
RERE-216ENST00000505225 NEXMIFQ5QGS0 1516 aa10.94□□□□□ -0.66
RERE-216ENST00000505225 EP400Q96L91 3159 aa10.93□□□□□ -0.66
RERE-216ENST00000505225 LOC105371045A0A1W2PR82 267 aa10.93□□□□□ -0.66
RERE-216ENST00000505225 PROSER2Q86WR7 435 aaPredicted RBP10.93□□□□□ -0.66
RERE-216ENST00000505225 MARF1Q9Y4F3 1742 aaKnown RBP10.92□□□□□ -0.66
RERE-216ENST00000505225 STAG3Q9UJ98 1225 aa10.92□□□□□ -0.66
RERE-216ENST00000505225 KIF1BO60333 1816 aa10.92□□□□□ -0.66
RERE-216ENST00000505225 SRCAPQ6ZRS2 3230 aa10.92□□□□□ -0.66
RERE-216ENST00000505225 MST1RQ04912 1400 aa10.92□□□□□ -0.66
RERE-216ENST00000505225 COL22A1Q8NFW1 1626 aaPredicted RBP10.91□□□□□ -0.66
RERE-216ENST00000505225 SPATA31A6Q5VVP1 1343 aa10.91□□□□□ -0.66
RERE-216ENST00000505225 SLAIN2Q9P270 581 aa10.91□□□□□ -0.66
RERE-216ENST00000505225 CHIC2Q9UKJ5 165 aa10.91□□□□□ -0.66
RERE-216ENST00000505225 ROCK1Q13464 1354 aa10.9□□□□□ -0.66
RERE-216ENST00000505225 TBX22Q9Y458 520 aa10.9□□□□□ -0.66
RERE-216ENST00000505225 PRAG1Q86YV5 1406 aa10.9□□□□□ -0.66
RERE-216ENST00000505225 SETD5Q9C0A6 1442 aa10.9□□□□□ -0.66
RERE-216ENST00000505225 PPLO60437 1756 aa10.89□□□□□ -0.67
RERE-216ENST00000505225 IFT172Q9UG01 1749 aa10.87□□□□□ -0.67
RERE-216ENST00000505225 RGS12O14924 1447 aa10.87□□□□□ -0.67
RERE-216ENST00000505225 ADGRL3Q9HAR2 1447 aa10.87□□□□□ -0.67
RERE-216ENST00000505225 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.87□□□□□ -0.67
RERE-216ENST00000505225 BRINP3Q76B58 766 aa10.85□□□□□ -0.67
RERE-216ENST00000505225 PTCH1Q13635 1447 aa10.84□□□□□ -0.67
RERE-216ENST00000505225 KNDC1Q76NI1 1749 aa10.84□□□□□ -0.67
RERE-216ENST00000505225 CADPS2Q86UW7 1296 aa10.84□□□□□ -0.67
RERE-216ENST00000505225 UPF1Q92900 1129 aaKnown RBP eCLIP10.84□□□□□ -0.67
RERE-216ENST00000505225 CDC42BPGQ6DT37 1551 aa10.84□□□□□ -0.67
RERE-216ENST00000505225 PNPLA6Q8IY17 1366 aa10.83□□□□□ -0.68
RERE-216ENST00000505225 PPP1R15AO75807 674 aaPredicted RBP10.83□□□□□ -0.68
RERE-216ENST00000505225 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.83□□□□□ -0.68
RERE-216ENST00000505225 C19orf44Q9H6X5 657 aa10.83□□□□□ -0.68
RERE-216ENST00000505225 ABCA3Q99758 1704 aa10.82□□□□□ -0.68
RERE-216ENST00000505225 ZNF772Q68DY9 489 aaPredicted RBP10.82□□□□□ -0.68
RERE-216ENST00000505225 METP08581 1390 aa10.81□□□□□ -0.68
RERE-216ENST00000505225 C1orf167Q5SNV9 1468 aa10.8□□□□□ -0.68
RERE-216ENST00000505225 HDGFP51858 240 aaKnown RBP10.79□□□□□ -0.68
RERE-216ENST00000505225 APLP2Q06481 763 aa10.79□□□□□ -0.68
RERE-216ENST00000505225 FAM50AQ14320 339 aaKnown RBP10.79□□□□□ -0.68
RERE-216ENST00000505225 NUTM2DQ5VT03 806 aaPredicted RBP10.79□□□□□ -0.68
RERE-216ENST00000505225 AMOTL2Q9Y2J4 779 aa10.79□□□□□ -0.68
RERE-216ENST00000505225 AFF2P51816 1311 aa10.79□□□□□ -0.68
RERE-216ENST00000505225 NUP155O75694 1391 aa10.78□□□□□ -0.68
RERE-216ENST00000505225 FMN2Q9NZ56 1722 aa10.78□□□□□ -0.68
RERE-216ENST00000505225 ATF3P18847 181 aa10.78□□□□□ -0.68
RERE-216ENST00000505225 BCANQ96GW7 911 aa10.78□□□□□ -0.68
RERE-216ENST00000505225 BRWD3Q6RI45 1802 aa10.78□□□□□ -0.68
RERE-216ENST00000505225 MYOM2P54296 1465 aa10.78□□□□□ -0.68
RERE-216ENST00000505225 PXDNQ92626 1479 aa10.77□□□□□ -0.69
RERE-216ENST00000505225 TRIM52Q96A61 297 aa10.77□□□□□ -0.69
RERE-216ENST00000505225 KIF1AQ12756 1690 aa10.76□□□□□ -0.69
RERE-216ENST00000505225 MEX3CQ5U5Q3 659 aaKnown RBP10.76□□□□□ -0.69
RERE-216ENST00000505225 PLCH1Q4KWH8 1693 aa10.76□□□□□ -0.69
RERE-216ENST00000505225 RXRBP28702 533 aa10.75□□□□□ -0.69
RERE-216ENST00000505225 C14orf37Q86TY3 774 aa10.75□□□□□ -0.69
RERE-216ENST00000505225 USP32Q8NFA0 1604 aa10.75□□□□□ -0.69
RERE-216ENST00000505225 ROBO2Q9HCK4 1378 aa10.75□□□□□ -0.69
RERE-216ENST00000505225 RGPD8O14715 1765 aaPredicted RBP10.75□□□□□ -0.69
RERE-216ENST00000505225 ATRNO75882 1429 aa10.75□□□□□ -0.69
RERE-216ENST00000505225 GLI3P10071 1580 aa10.74□□□□□ -0.69
RERE-216ENST00000505225 CHGAP10645 457 aaKnown RBP10.74□□□□□ -0.69
RERE-216ENST00000505225 NWD2Q9ULI1 1742 aa10.74□□□□□ -0.69
RERE-216ENST00000505225 NAIPQ13075 1403 aa10.74□□□□□ -0.69
RERE-216ENST00000505225 SOS2Q07890 1332 aaPredicted RBP10.73□□□□□ -0.69
RERE-216ENST00000505225 RRBP1Q9P2E9 1410 aaKnown RBP10.73□□□□□ -0.69
RERE-216ENST00000505225 LRP5O75197 1615 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms