RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 SYNMO15061 1565 aa18.19■□□□□ 0.5
CCSER1-205ENST00000505073 NEFLP07196 543 aa18.18■□□□□ 0.5
CCSER1-205ENST00000505073 LAMC1P11047 1609 aa18.18■□□□□ 0.5
CCSER1-205ENST00000505073 TRHP20396 242 aaPredicted RBP18.16■□□□□ 0.5
CCSER1-205ENST00000505073 FBXO31Q5XUX0 539 aaPredicted RBP18.16■□□□□ 0.5
CCSER1-205ENST00000505073 RBM19Q9Y4C8 960 aaKnown RBP18.16■□□□□ 0.5
CCSER1-205ENST00000505073 IFT172Q9UG01 1749 aa18.15■□□□□ 0.5
CCSER1-205ENST00000505073 MYOM2P54296 1465 aa18.15■□□□□ 0.5
CCSER1-205ENST00000505073 IDI1Q13907 227 aa18.14■□□□□ 0.49
CCSER1-205ENST00000505073 CCER2I3L3R5 266 aa18.14■□□□□ 0.49
CCSER1-205ENST00000505073 CFAP70Q5T0N1 1121 aa18.14■□□□□ 0.49
CCSER1-205ENST00000505073 ARID4BQ4LE39 1312 aaPredicted RBP18.14■□□□□ 0.49
CCSER1-205ENST00000505073 PIK3C2BO00750 1634 aa18.13■□□□□ 0.49
CCSER1-205ENST00000505073 PREX1Q8TCU6 1659 aa18.13■□□□□ 0.49
CCSER1-205ENST00000505073 CLTCQ00610 1675 aaKnown RBP18.12■□□□□ 0.49
CCSER1-205ENST00000505073 TESK2Q96S53 571 aa18.12■□□□□ 0.49
CCSER1-205ENST00000505073 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
CCSER1-205ENST00000505073 NUTM2DQ5VT03 806 aaPredicted RBP18.1■□□□□ 0.49
CCSER1-205ENST00000505073 PPLO60437 1756 aa18.09■□□□□ 0.49
CCSER1-205ENST00000505073 SLC52A1Q9NWF4 448 aa18.09■□□□□ 0.49
CCSER1-205ENST00000505073 NRXN1Q9ULB1 1477 aa18.09■□□□□ 0.49
CCSER1-205ENST00000505073 IQGAP1P46940 1657 aa18.09■□□□□ 0.49
CCSER1-205ENST00000505073 KIAA1210Q9ULL0 1709 aa18.09■□□□□ 0.49
CCSER1-205ENST00000505073 ERVK-7P63135 1459 aa18.08■□□□□ 0.49
CCSER1-205ENST00000505073 SCAF11Q99590 1463 aaKnown RBP18.08■□□□□ 0.48
CCSER1-205ENST00000505073 DISP3Q9P2K9 1392 aa18.08■□□□□ 0.48
CCSER1-205ENST00000505073 RPGRIP1LQ68CZ1 1315 aa18.08■□□□□ 0.48
CCSER1-205ENST00000505073 CNGB1Q14028 1251 aaPredicted RBP18.07■□□□□ 0.48
CCSER1-205ENST00000505073 PRKRIP1Q9H875 184 aaPredicted RBP18.06■□□□□ 0.48
CCSER1-205ENST00000505073 MYO5BQ9ULV0 1848 aa18.05■□□□□ 0.48
CCSER1-205ENST00000505073 ESF1Q9H501 851 aaKnown RBP18.05■□□□□ 0.48
CCSER1-205ENST00000505073 PIK3C2GO75747 1445 aa18.04■□□□□ 0.48
CCSER1-205ENST00000505073 NEXMIFQ5QGS0 1516 aa18.04■□□□□ 0.48
CCSER1-205ENST00000505073 TMF1P82094 1093 aa18.04■□□□□ 0.48
CCSER1-205ENST00000505073 SENP3Q9H4L4 574 aaPredicted RBP18.04■□□□□ 0.48
CCSER1-205ENST00000505073 TMEM131LA2VDJ0 1609 aa18.02■□□□□ 0.48
CCSER1-205ENST00000505073 C14orf93Q9H972 538 aaKnown RBP18.02■□□□□ 0.47
CCSER1-205ENST00000505073 VGFO15240 615 aaPredicted RBP18.01■□□□□ 0.47
CCSER1-205ENST00000505073 DNAJC5Q9H3Z4 198 aa18.01■□□□□ 0.47
CCSER1-205ENST00000505073 CCDC184Q52MB2 194 aa18.01■□□□□ 0.47
CCSER1-205ENST00000505073 ZMYM3Q14202 1370 aa18.01■□□□□ 0.47
CCSER1-205ENST00000505073 TMEM132EQ6IEE7 984 aa18■□□□□ 0.47
CCSER1-205ENST00000505073 STAG3Q9UJ98 1225 aa18■□□□□ 0.47
CCSER1-205ENST00000505073 EIF3AQ14152 1382 aaKnown RBP18■□□□□ 0.47
CCSER1-205ENST00000505073 SPATA31D1Q6ZQQ2 1576 aa18■□□□□ 0.47
CCSER1-205ENST00000505073 TRAK1Q9UPV9 953 aa17.97■□□□□ 0.47
CCSER1-205ENST00000505073 SETBP1Q9Y6X0 1596 aa17.97■□□□□ 0.47
CCSER1-205ENST00000505073 ADGRB1O14514 1584 aa17.96■□□□□ 0.47
CCSER1-205ENST00000505073 MSH5O43196 834 aa17.95■□□□□ 0.46
CCSER1-205ENST00000505073 ZFYVE9O95405 1425 aa17.94■□□□□ 0.46
CCSER1-205ENST00000505073 PANK3Q9H999 370 aa17.93■□□□□ 0.46
CCSER1-205ENST00000505073 MRS2Q9HD23 443 aa17.93■□□□□ 0.46
CCSER1-205ENST00000505073 FANCIQ9NVI1 1328 aa17.93■□□□□ 0.46
CCSER1-205ENST00000505073 A2ML1A8K2U0 1454 aa17.93■□□□□ 0.46
CCSER1-205ENST00000505073 CENPJQ9HC77 1338 aaPredicted RBP17.91■□□□□ 0.46
CCSER1-205ENST00000505073 PER1O15534 1290 aaPredicted RBP17.91■□□□□ 0.46
CCSER1-205ENST00000505073 CDCA8Q53HL2 280 aa17.9■□□□□ 0.46
CCSER1-205ENST00000505073 CEBPAP49715 358 aaPredicted RBP17.9■□□□□ 0.46
CCSER1-205ENST00000505073 TNRQ92752 1358 aa17.9■□□□□ 0.46
CCSER1-205ENST00000505073 MYO3AQ8NEV4 1616 aa17.89■□□□□ 0.45
CCSER1-205ENST00000505073 PLPPR3Q6T4P5 718 aa17.88■□□□□ 0.45
CCSER1-205ENST00000505073 STK26Q9P289 416 aa17.88■□□□□ 0.45
CCSER1-205ENST00000505073 RIMS2Q9UQ26 1411 aa17.88■□□□□ 0.45
CCSER1-205ENST00000505073 FAM9BQ8IZU0 186 aa17.87■□□□□ 0.45
CCSER1-205ENST00000505073 ASXL1Q8IXJ9 1541 aa17.87■□□□□ 0.45
CCSER1-205ENST00000505073 KDM5AP29375 1690 aaKnown RBP17.86■□□□□ 0.45
CCSER1-205ENST00000505073 QRICH2Q9H0J4 1663 aa17.85■□□□□ 0.45
CCSER1-205ENST00000505073 SBNO2Q9Y2G9 1366 aa17.85■□□□□ 0.45
CCSER1-205ENST00000505073 CC2D1BQ5T0F9 858 aaKnown RBP17.85■□□□□ 0.45
CCSER1-205ENST00000505073 SLC24A1O60721 1099 aa17.85■□□□□ 0.45
CCSER1-205ENST00000505073 KTN1Q86UP2 1357 aaKnown RBP17.84■□□□□ 0.45
CCSER1-205ENST00000505073 RALBP1Q15311 655 aa17.84■□□□□ 0.45
CCSER1-205ENST00000505073 MYOM1P52179 1685 aa17.84■□□□□ 0.45
CCSER1-205ENST00000505073 SAFB2Q14151 953 aaKnown RBP eCLIP17.84■□□□□ 0.45
CCSER1-205ENST00000505073 ARHGEF28Q8N1W1 1705 aaKnown RBP17.83■□□□□ 0.45
CCSER1-205ENST00000505073 ALKQ9UM73 1620 aa17.83■□□□□ 0.45
CCSER1-205ENST00000505073 HNRNPUQ00839 825 aaKnown RBP eCLIP17.83■□□□□ 0.44
CCSER1-205ENST00000505073 MYBBP1AQ9BQG0 1328 aaKnown RBP17.82■□□□□ 0.44
CCSER1-205ENST00000505073 FER1L4A9Z1Z3 1794 aa17.81■□□□□ 0.44
CCSER1-205ENST00000505073 ERICH6Q7L0X2 663 aa17.81■□□□□ 0.44
CCSER1-205ENST00000505073 PARD3Q8TEW0 1356 aa17.81■□□□□ 0.44
CCSER1-205ENST00000505073 YTHDC2Q9H6S0 1430 aaKnown RBP17.8■□□□□ 0.44
CCSER1-205ENST00000505073 C3P01024 1663 aa17.8■□□□□ 0.44
CCSER1-205ENST00000505073 KNSTRNQ9Y448 316 aa17.8■□□□□ 0.44
CCSER1-205ENST00000505073 ERICH6BQ5W0A0 696 aa17.79■□□□□ 0.44
CCSER1-205ENST00000505073 TMC1Q8TDI8 760 aa17.79■□□□□ 0.44
CCSER1-205ENST00000505073 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.79■□□□□ 0.44
CCSER1-205ENST00000505073 PTPRMP28827 1452 aa17.79■□□□□ 0.44
CCSER1-205ENST00000505073 UBR1Q8IWV7 1749 aa17.78■□□□□ 0.44
CCSER1-205ENST00000505073 IRX6P78412 446 aaPredicted RBP17.77■□□□□ 0.44
CCSER1-205ENST00000505073 PRAM1Q96QH2 718 aa17.77■□□□□ 0.44
CCSER1-205ENST00000505073 AMER1Q5JTC6 1135 aaPredicted RBP17.76■□□□□ 0.43
CCSER1-205ENST00000505073 TMEM2Q9UHN6 1383 aa17.76■□□□□ 0.43
CCSER1-205ENST00000505073 POGKQ9P215 609 aa17.75■□□□□ 0.43
CCSER1-205ENST00000505073 BRD4O60885 1362 aaPredicted RBP17.75■□□□□ 0.43
CCSER1-205ENST00000505073 TULP4Q9NRJ4 1543 aa17.75■□□□□ 0.43
CCSER1-205ENST00000505073 EVC2Q86UK5 1308 aa17.75■□□□□ 0.43
CCSER1-205ENST00000505073 NRXN3Q9Y4C0 1643 aa17.75■□□□□ 0.43
CCSER1-205ENST00000505073 NLRP1Q9C000 1473 aa17.75■□□□□ 0.43
CCSER1-205ENST00000505073 SETD1AO15047 1707 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms