RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 KIF1BO60333 1816 aa14.46□□□□□ -0.09
NR1I3-220ENST00000505005 VGFO15240 615 aaPredicted RBP14.46□□□□□ -0.09
NR1I3-220ENST00000505005 CCDC144AA2RUR9 1427 aa14.46□□□□□ -0.09
NR1I3-220ENST00000505005 ZNF326Q5BKZ1 582 aaKnown RBP14.45□□□□□ -0.1
NR1I3-220ENST00000505005 BCANQ96GW7 911 aa14.45□□□□□ -0.1
NR1I3-220ENST00000505005 IQGAP1P46940 1657 aa14.45□□□□□ -0.1
NR1I3-220ENST00000505005 TMEM131LA2VDJ0 1609 aa14.44□□□□□ -0.1
NR1I3-220ENST00000505005 CERKQ8TCT0 537 aa14.44□□□□□ -0.1
NR1I3-220ENST00000505005 RIMS2Q9UQ26 1411 aa14.43□□□□□ -0.1
NR1I3-220ENST00000505005 CPS1P31327 1500 aa14.43□□□□□ -0.1
NR1I3-220ENST00000505005 PLEKHG1Q9ULL1 1385 aa14.43□□□□□ -0.1
NR1I3-220ENST00000505005 LTKP29376 864 aa14.42□□□□□ -0.1
NR1I3-220ENST00000505005 TBX22Q9Y458 520 aa14.42□□□□□ -0.1
NR1I3-220ENST00000505005 PIAS4Q8N2W9 510 aaPredicted RBP14.41□□□□□ -0.1
NR1I3-220ENST00000505005 PIK3R4Q99570 1358 aa14.41□□□□□ -0.1
NR1I3-220ENST00000505005 NEURL4Q96JN8 1562 aa14.41□□□□□ -0.1
NR1I3-220ENST00000505005 FBXO41Q8TF61 875 aa14.4□□□□□ -0.1
NR1I3-220ENST00000505005 ZFYVE9O95405 1425 aa14.4□□□□□ -0.1
NR1I3-220ENST00000505005 ANKRD30BQ9BXX2 1392 aa14.38□□□□□ -0.11
NR1I3-220ENST00000505005 DIP2AQ14689 1571 aa14.38□□□□□ -0.11
NR1I3-220ENST00000505005 KCNA6P17658 529 aa14.37□□□□□ -0.11
NR1I3-220ENST00000505005 CLTCL1P53675 1640 aa14.35□□□□□ -0.11
NR1I3-220ENST00000505005 TOM1O60784 492 aa14.35□□□□□ -0.11
NR1I3-220ENST00000505005 MYO5BQ9ULV0 1848 aa14.35□□□□□ -0.11
NR1I3-220ENST00000505005 ZNF335Q9H4Z2 1342 aaPredicted RBP14.35□□□□□ -0.11
NR1I3-220ENST00000505005 LTBP4Q8N2S1 1624 aa14.34□□□□□ -0.11
NR1I3-220ENST00000505005 NCOA3Q9Y6Q9 1424 aa14.33□□□□□ -0.11
NR1I3-220ENST00000505005 SLC26A8Q96RN1 970 aa14.31□□□□□ -0.12
NR1I3-220ENST00000505005 NKTRP30414 1462 aaKnown RBP14.31□□□□□ -0.12
NR1I3-220ENST00000505005 SETBP1Q9Y6X0 1596 aa14.3□□□□□ -0.12
NR1I3-220ENST00000505005 RGL3Q3MIN7 710 aa14.29□□□□□ -0.12
NR1I3-220ENST00000505005 PROSER2Q86WR7 435 aaPredicted RBP14.29□□□□□ -0.12
NR1I3-220ENST00000505005 NEXMIFQ5QGS0 1516 aa14.29□□□□□ -0.12
NR1I3-220ENST00000505005 SPATA31E1Q6ZUB1 1445 aa14.28□□□□□ -0.12
NR1I3-220ENST00000505005 CHD2O14647 1828 aaKnown RBP14.27□□□□□ -0.13
NR1I3-220ENST00000505005 PPLO60437 1756 aa14.26□□□□□ -0.13
NR1I3-220ENST00000505005 ADAMTS13Q76LX8 1427 aa14.25□□□□□ -0.13
NR1I3-220ENST00000505005 UBAP1LF5GYI3 381 aa14.25□□□□□ -0.13
NR1I3-220ENST00000505005 NUTM2DQ5VT03 806 aaPredicted RBP14.25□□□□□ -0.13
NR1I3-220ENST00000505005 AMOTL2Q9Y2J4 779 aa14.25□□□□□ -0.13
NR1I3-220ENST00000505005 NWD1Q149M9 1564 aa14.25□□□□□ -0.13
NR1I3-220ENST00000505005 MSH6P52701 1360 aa14.24□□□□□ -0.13
NR1I3-220ENST00000505005 LRRC7Q96NW7 1537 aa14.24□□□□□ -0.13
NR1I3-220ENST00000505005 MYOM2P54296 1465 aa14.23□□□□□ -0.13
NR1I3-220ENST00000505005 C14orf37Q86TY3 774 aa14.22□□□□□ -0.13
NR1I3-220ENST00000505005 CADPS2Q86UW7 1296 aa14.22□□□□□ -0.13
NR1I3-220ENST00000505005 C19orf44Q9H6X5 657 aa14.22□□□□□ -0.13
NR1I3-220ENST00000505005 CLSPNQ9HAW4 1339 aa14.21□□□□□ -0.13
NR1I3-220ENST00000505005 ILDR1Q86SU0 546 aaPredicted RBP14.21□□□□□ -0.13
NR1I3-220ENST00000505005 SIRT1Q96EB6 747 aa14.21□□□□□ -0.13
NR1I3-220ENST00000505005 LAMC1P11047 1609 aa14.21□□□□□ -0.13
NR1I3-220ENST00000505005 TMEM94Q12767 1356 aa14.21□□□□□ -0.14
NR1I3-220ENST00000505005 DHX57Q6P158 1386 aaKnown RBP14.21□□□□□ -0.14
NR1I3-220ENST00000505005 ATF3P18847 181 aa14.2□□□□□ -0.14
NR1I3-220ENST00000505005 DCAF11Q8TEB1 546 aa14.2□□□□□ -0.14
NR1I3-220ENST00000505005 C14orf93Q9H972 538 aaKnown RBP14.2□□□□□ -0.14
NR1I3-220ENST00000505005 ALKQ9UM73 1620 aa14.19□□□□□ -0.14
NR1I3-220ENST00000505005 IFT172Q9UG01 1749 aa14.19□□□□□ -0.14
NR1I3-220ENST00000505005 PRAG1Q86YV5 1406 aa14.19□□□□□ -0.14
NR1I3-220ENST00000505005 PIK3C2GO75747 1445 aa14.18□□□□□ -0.14
NR1I3-220ENST00000505005 DCCP43146 1447 aa14.18□□□□□ -0.14
NR1I3-220ENST00000505005 ADGRF5Q8IZF2 1346 aa14.17□□□□□ -0.14
NR1I3-220ENST00000505005 PTCH1Q13635 1447 aa14.17□□□□□ -0.14
NR1I3-220ENST00000505005 ABCC11Q96J66 1382 aa14.17□□□□□ -0.14
NR1I3-220ENST00000505005 NRXN1Q9ULB1 1477 aa14.17□□□□□ -0.14
NR1I3-220ENST00000505005 STRCP1A6NGW2 1772 aa14.17□□□□□ -0.14
NR1I3-220ENST00000505005 NRXN3Q9Y4C0 1643 aa14.16□□□□□ -0.14
NR1I3-220ENST00000505005 TIMELESSQ9UNS1 1208 aa14.16□□□□□ -0.14
NR1I3-220ENST00000505005 METP08581 1390 aa14.15□□□□□ -0.14
NR1I3-220ENST00000505005 LRPPRCP42704 1394 aaKnown RBP14.15□□□□□ -0.14
NR1I3-220ENST00000505005 KDM2AQ9Y2K7 1162 aa14.14□□□□□ -0.15
NR1I3-220ENST00000505005 FAM135BQ49AJ0 1406 aa14.14□□□□□ -0.15
NR1I3-220ENST00000505005 SCAF1Q9H7N4 1312 aaKnown RBP14.14□□□□□ -0.15
NR1I3-220ENST00000505005 XRN1Q8IZH2 1706 aaKnown RBP14.13□□□□□ -0.15
NR1I3-220ENST00000505005 SLAIN2Q9P270 581 aa14.13□□□□□ -0.15
NR1I3-220ENST00000505005 TECPR2O15040 1411 aa14.13□□□□□ -0.15
NR1I3-220ENST00000505005 PCGF6Q9BYE7 350 aa14.12□□□□□ -0.15
NR1I3-220ENST00000505005 SLC24A1O60721 1099 aa14.11□□□□□ -0.15
NR1I3-220ENST00000505005 PIP4K2BP78356 416 aa14.11□□□□□ -0.15
NR1I3-220ENST00000505005 PTPRUQ92729 1446 aa14.11□□□□□ -0.15
NR1I3-220ENST00000505005 TONSLQ96HA7 1378 aa14.1□□□□□ -0.15
NR1I3-220ENST00000505005 YTHDC2Q9H6S0 1430 aaKnown RBP14.1□□□□□ -0.15
NR1I3-220ENST00000505005 CFAP70Q5T0N1 1121 aa14.1□□□□□ -0.15
NR1I3-220ENST00000505005 SETD1AO15047 1707 aaKnown RBP14.1□□□□□ -0.15
NR1I3-220ENST00000505005 KIAA1210Q9ULL0 1709 aa14.1□□□□□ -0.15
NR1I3-220ENST00000505005 ADGRL3Q9HAR2 1447 aa14.09□□□□□ -0.15
NR1I3-220ENST00000505005 XIRP1Q702N8 1843 aaKnown RBP14.09□□□□□ -0.15
NR1I3-220ENST00000505005 NEUROD1Q13562 356 aa14.09□□□□□ -0.15
NR1I3-220ENST00000505005 POGKQ9P215 609 aa14.09□□□□□ -0.15
NR1I3-220ENST00000505005 KNDC1Q76NI1 1749 aa14.09□□□□□ -0.15
NR1I3-220ENST00000505005 EIF3AQ14152 1382 aaKnown RBP14.09□□□□□ -0.15
NR1I3-220ENST00000505005 DLC1Q96QB1 1528 aa14.07□□□□□ -0.16
NR1I3-220ENST00000505005 L3MBTL2Q969R5 705 aa14.07□□□□□ -0.16
NR1I3-220ENST00000505005 STK26Q9P289 416 aa14.07□□□□□ -0.16
NR1I3-220ENST00000505005 TMEM132EQ6IEE7 984 aa14.06□□□□□ -0.16
NR1I3-220ENST00000505005 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.06□□□□□ -0.16
NR1I3-220ENST00000505005 ROBO2Q9HCK4 1378 aa14.05□□□□□ -0.16
NR1I3-220ENST00000505005 SIN3AQ96ST3 1273 aa14.04□□□□□ -0.16
NR1I3-220ENST00000505005 KCNA4P22459 653 aa14.03□□□□□ -0.16
NR1I3-220ENST00000505005 RBM33Q96EV2 1170 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms