RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 MPHOSPH9Q99550 1183 aa29.97■■■□□ 2.39
HERC6-205ENST00000504905 MYO5BQ9ULV0 1848 aa29.96■■■□□ 2.39
HERC6-205ENST00000504905 SLIT1O75093 1534 aa29.96■■■□□ 2.39
HERC6-205ENST00000504905 TRPM2O94759 1503 aa29.96■■■□□ 2.39
HERC6-205ENST00000504905 ARHGAP23Q9P227 1491 aa29.94■■■□□ 2.38
HERC6-205ENST00000504905 TMEM131LA2VDJ0 1609 aa29.94■■■□□ 2.38
HERC6-205ENST00000504905 HRCP23327 699 aa29.93■■■□□ 2.38
HERC6-205ENST00000504905 SCAF11Q99590 1463 aaKnown RBP29.93■■■□□ 2.38
HERC6-205ENST00000504905 TMEM2Q9UHN6 1383 aa29.92■■■□□ 2.38
HERC6-205ENST00000504905 CHGAP10645 457 aaKnown RBP29.92■■■□□ 2.38
HERC6-205ENST00000504905 PHF23Q9BUL5 403 aaPredicted RBP29.92■■■□□ 2.38
HERC6-205ENST00000504905 CLTCL1P53675 1640 aa29.9■■■□□ 2.38
HERC6-205ENST00000504905 FOXD1Q16676 465 aa29.9■■■□□ 2.38
HERC6-205ENST00000504905 EID1Q9Y6B2 187 aa29.9■■■□□ 2.38
HERC6-205ENST00000504905 LTKP29376 864 aa29.88■■■□□ 2.37
HERC6-205ENST00000504905 TRIM26Q12899 539 aaPredicted RBP29.88■■■□□ 2.37
HERC6-205ENST00000504905 TXNDC2Q86VQ3 553 aa29.88■■■□□ 2.37
HERC6-205ENST00000504905 KIF1BO60333 1816 aa29.86■■■□□ 2.37
HERC6-205ENST00000504905 SENP3Q9H4L4 574 aaPredicted RBP29.81■■■□□ 2.36
HERC6-205ENST00000504905 RIMS2Q9UQ26 1411 aa29.8■■■□□ 2.36
HERC6-205ENST00000504905 ZFYVE9O95405 1425 aa29.79■■■□□ 2.36
HERC6-205ENST00000504905 HDGFP51858 240 aaKnown RBP29.79■■■□□ 2.36
HERC6-205ENST00000504905 XIRP1Q702N8 1843 aaKnown RBP29.78■■■□□ 2.36
HERC6-205ENST00000504905 CCDC144AA2RUR9 1427 aa29.77■■■□□ 2.36
HERC6-205ENST00000504905 PPP1R15AO75807 674 aaPredicted RBP29.75■■■□□ 2.35
HERC6-205ENST00000504905 ZNF326Q5BKZ1 582 aaKnown RBP29.75■■■□□ 2.35
HERC6-205ENST00000504905 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.75■■■□□ 2.35
HERC6-205ENST00000504905 FAM135BQ49AJ0 1406 aa29.71■■■□□ 2.35
HERC6-205ENST00000504905 NUTM2DQ5VT03 806 aaPredicted RBP29.7■■■□□ 2.35
HERC6-205ENST00000504905 RGS17Q9UGC6 210 aaPredicted RBP29.7■■■□□ 2.35
HERC6-205ENST00000504905 BCANQ96GW7 911 aa29.69■■■□□ 2.34
HERC6-205ENST00000504905 PLEKHG1Q9ULL1 1385 aa29.68■■■□□ 2.34
HERC6-205ENST00000504905 NEXMIFQ5QGS0 1516 aa29.66■■■□□ 2.34
HERC6-205ENST00000504905 KCNA6P17658 529 aa29.65■■■□□ 2.34
HERC6-205ENST00000504905 TMEM94Q12767 1356 aa29.64■■■□□ 2.34
HERC6-205ENST00000504905 ANKRD30BQ9BXX2 1392 aa29.64■■■□□ 2.34
HERC6-205ENST00000504905 SLC26A8Q96RN1 970 aa29.62■■■□□ 2.33
HERC6-205ENST00000504905 RPGRIP1LQ68CZ1 1315 aa29.6■■■□□ 2.33
HERC6-205ENST00000504905 SPATA31E1Q6ZUB1 1445 aa29.6■■■□□ 2.33
HERC6-205ENST00000504905 PPLO60437 1756 aa29.59■■■□□ 2.33
HERC6-205ENST00000504905 RGL3Q3MIN7 710 aa29.58■■■□□ 2.33
HERC6-205ENST00000504905 PROSER2Q86WR7 435 aaPredicted RBP29.57■■■□□ 2.32
HERC6-205ENST00000504905 DIP2AQ14689 1571 aa29.56■■■□□ 2.32
HERC6-205ENST00000504905 ROBO1Q9Y6N7 1651 aa29.55■■■□□ 2.32
HERC6-205ENST00000504905 VGFO15240 615 aaPredicted RBP29.54■■■□□ 2.32
HERC6-205ENST00000504905 SETBP1Q9Y6X0 1596 aa29.54■■■□□ 2.32
HERC6-205ENST00000504905 NKTRP30414 1462 aaKnown RBP29.54■■■□□ 2.32
HERC6-205ENST00000504905 ADAMTS13Q76LX8 1427 aa29.54■■■□□ 2.32
HERC6-205ENST00000504905 NWD1Q149M9 1564 aa29.53■■■□□ 2.32
HERC6-205ENST00000504905 IFT172Q9UG01 1749 aa29.53■■■□□ 2.32
HERC6-205ENST00000504905 NRXN3Q9Y4C0 1643 aa29.53■■■□□ 2.32
HERC6-205ENST00000504905 TBX22Q9Y458 520 aa29.52■■■□□ 2.32
HERC6-205ENST00000504905 RBM33Q96EV2 1170 aaKnown RBP29.51■■■□□ 2.31
HERC6-205ENST00000504905 POTEAQ6S8J7 498 aa29.49■■■□□ 2.31
HERC6-205ENST00000504905 CHD2O14647 1828 aaKnown RBP29.48■■■□□ 2.31
HERC6-205ENST00000504905 MSH6P52701 1360 aa29.46■■■□□ 2.31
HERC6-205ENST00000504905 DHX57Q6P158 1386 aaKnown RBP29.44■■■□□ 2.3
HERC6-205ENST00000504905 PCGF6Q9BYE7 350 aa29.44■■■□□ 2.3
HERC6-205ENST00000504905 PIK3R4Q99570 1358 aa29.43■■■□□ 2.3
HERC6-205ENST00000504905 SLAIN2Q9P270 581 aa29.43■■■□□ 2.3
HERC6-205ENST00000504905 ADGRF5Q8IZF2 1346 aa29.41■■■□□ 2.3
HERC6-205ENST00000504905 SETD1AO15047 1707 aaKnown RBP29.38■■■□□ 2.29
HERC6-205ENST00000504905 PHLPP1O60346 1717 aa29.37■■■□□ 2.29
HERC6-205ENST00000504905 MYOM2P54296 1465 aa29.37■■■□□ 2.29
HERC6-205ENST00000504905 METP08581 1390 aa29.36■■■□□ 2.29
HERC6-205ENST00000504905 JCADQ9P266 1359 aa29.36■■■□□ 2.29
HERC6-205ENST00000504905 PTPRUQ92729 1446 aa29.35■■■□□ 2.29
HERC6-205ENST00000504905 NCOA3Q9Y6Q9 1424 aa29.35■■■□□ 2.29
HERC6-205ENST00000504905 PIK3C2GO75747 1445 aa29.34■■■□□ 2.29
HERC6-205ENST00000504905 AMOTL2Q9Y2J4 779 aa29.33■■■□□ 2.29
HERC6-205ENST00000504905 XRN1Q8IZH2 1706 aaKnown RBP29.32■■■□□ 2.28
HERC6-205ENST00000504905 NRXN1Q9ULB1 1477 aa29.31■■■□□ 2.28
HERC6-205ENST00000504905 DCAF11Q8TEB1 546 aa29.31■■■□□ 2.28
HERC6-205ENST00000504905 KDM2AQ9Y2K7 1162 aa29.29■■■□□ 2.28
HERC6-205ENST00000504905 COL16A1Q07092 1604 aaPredicted RBP29.29■■■□□ 2.28
HERC6-205ENST00000504905 STAC3Q96MF2 364 aa29.28■■■□□ 2.28
HERC6-205ENST00000504905 SIN3AQ96ST3 1273 aa29.28■■■□□ 2.28
HERC6-205ENST00000504905 LAMC1P11047 1609 aa29.27■■■□□ 2.28
HERC6-205ENST00000504905 NEUROD1Q13562 356 aa29.25■■■□□ 2.27
HERC6-205ENST00000504905 SPATA31A6Q5VVP1 1343 aa29.22■■■□□ 2.27
HERC6-205ENST00000504905 CADPS2Q86UW7 1296 aa29.22■■■□□ 2.27
HERC6-205ENST00000504905 C19orf44Q9H6X5 657 aa29.22■■■□□ 2.27
HERC6-205ENST00000504905 C14orf93Q9H972 538 aaKnown RBP29.22■■■□□ 2.27
HERC6-205ENST00000504905 C14orf37Q86TY3 774 aa29.21■■■□□ 2.27
HERC6-205ENST00000504905 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.2■■■□□ 2.27
HERC6-205ENST00000504905 CFAP70Q5T0N1 1121 aa29.2■■■□□ 2.26
HERC6-205ENST00000504905 ASXL1Q8IXJ9 1541 aa29.2■■■□□ 2.26
HERC6-205ENST00000504905 AHDC1Q5TGY3 1603 aaPredicted RBP29.19■■■□□ 2.26
HERC6-205ENST00000504905 TMEM132EQ6IEE7 984 aa29.18■■■□□ 2.26
HERC6-205ENST00000504905 LRP6O75581 1613 aa29.18■■■□□ 2.26
HERC6-205ENST00000504905 ATF3P18847 181 aa29.17■■■□□ 2.26
HERC6-205ENST00000504905 PTCH1Q13635 1447 aa29.17■■■□□ 2.26
HERC6-205ENST00000504905 PRAG1Q86YV5 1406 aa29.16■■■□□ 2.26
HERC6-205ENST00000504905 LRPPRCP42704 1394 aaKnown RBP29.14■■■□□ 2.26
HERC6-205ENST00000504905 ZNF772Q68DY9 489 aaPredicted RBP29.14■■■□□ 2.26
HERC6-205ENST00000504905 L3MBTL2Q969R5 705 aa29.14■■■□□ 2.26
HERC6-205ENST00000504905 STK26Q9P289 416 aa29.14■■■□□ 2.26
HERC6-205ENST00000504905 SHPRHQ149N8 1683 aa29.14■■■□□ 2.26
HERC6-205ENST00000504905 KNDC1Q76NI1 1749 aa29.14■■■□□ 2.25
HERC6-205ENST00000504905 ROBO2Q9HCK4 1378 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms