RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 IDI1Q13907 227 aa7.35□□□□□ -1.23
LMNB1-208ENST00000504788 SLIT1O75093 1534 aa7.35□□□□□ -1.23
LMNB1-208ENST00000504788 ZFYVE9O95405 1425 aa7.34□□□□□ -1.23
LMNB1-208ENST00000504788 PPLO60437 1756 aa7.34□□□□□ -1.23
LMNB1-208ENST00000504788 NEXMIFQ5QGS0 1516 aa7.34□□□□□ -1.24
LMNB1-208ENST00000504788 SLC52A1Q9NWF4 448 aa7.33□□□□□ -1.24
LMNB1-208ENST00000504788 NRXN3Q9Y4C0 1643 aa7.32□□□□□ -1.24
LMNB1-208ENST00000504788 DSG3P32926 999 aa7.32□□□□□ -1.24
LMNB1-208ENST00000504788 SETD1AO15047 1707 aaKnown RBP7.32□□□□□ -1.24
LMNB1-208ENST00000504788 POLR1AO95602 1720 aaPredicted RBP7.32□□□□□ -1.24
LMNB1-208ENST00000504788 ESF1Q9H501 851 aaKnown RBP7.31□□□□□ -1.24
LMNB1-208ENST00000504788 UHRF1BP1Q6BDS2 1440 aa7.31□□□□□ -1.24
LMNB1-208ENST00000504788 CCDC144AA2RUR9 1427 aa7.31□□□□□ -1.24
LMNB1-208ENST00000504788 NRXN1Q9ULB1 1477 aa7.31□□□□□ -1.24
LMNB1-208ENST00000504788 MED14O60244 1454 aa7.3□□□□□ -1.24
LMNB1-208ENST00000504788 TMEM2Q9UHN6 1383 aa7.29□□□□□ -1.24
LMNB1-208ENST00000504788 CLSPNQ9HAW4 1339 aa7.29□□□□□ -1.24
LMNB1-208ENST00000504788 CAPN15O75808 1086 aa7.29□□□□□ -1.24
LMNB1-208ENST00000504788 SIN3AQ96ST3 1273 aa7.29□□□□□ -1.24
LMNB1-208ENST00000504788 NCBP3Q53F19 620 aaKnown RBP7.29□□□□□ -1.24
LMNB1-208ENST00000504788 IQGAP1P46940 1657 aa7.28□□□□□ -1.24
LMNB1-208ENST00000504788 LTKP29376 864 aa7.28□□□□□ -1.24
LMNB1-208ENST00000504788 SETBP1Q9Y6X0 1596 aa7.28□□□□□ -1.24
LMNB1-208ENST00000504788 MYOM2P54296 1465 aa7.28□□□□□ -1.24
LMNB1-208ENST00000504788 HSPA2P54652 639 aa7.27□□□□□ -1.25
LMNB1-208ENST00000504788 ADAMTS13Q76LX8 1427 aa7.26□□□□□ -1.25
LMNB1-208ENST00000504788 RIMS2Q9UQ26 1411 aa7.26□□□□□ -1.25
LMNB1-208ENST00000504788 ASXL1Q8IXJ9 1541 aa7.26□□□□□ -1.25
LMNB1-208ENST00000504788 SCAF11Q99590 1463 aaKnown RBP7.26□□□□□ -1.25
LMNB1-208ENST00000504788 PIK3C2GO75747 1445 aa7.26□□□□□ -1.25
LMNB1-208ENST00000504788 STRCP1A6NGW2 1772 aa7.26□□□□□ -1.25
LMNB1-208ENST00000504788 THEMISQ8N1K5 641 aaPredicted RBP7.25□□□□□ -1.25
LMNB1-208ENST00000504788 ADGRB1O14514 1584 aa7.24□□□□□ -1.25
LMNB1-208ENST00000504788 KIAA1210Q9ULL0 1709 aa7.24□□□□□ -1.25
LMNB1-208ENST00000504788 CHD2O14647 1828 aaKnown RBP7.24□□□□□ -1.25
LMNB1-208ENST00000504788 TRPM1Q7Z4N2 1603 aa7.24□□□□□ -1.25
LMNB1-208ENST00000504788 RPGRIP1LQ68CZ1 1315 aa7.24□□□□□ -1.25
LMNB1-208ENST00000504788 ADGRF5Q8IZF2 1346 aa7.24□□□□□ -1.25
LMNB1-208ENST00000504788 L3MBTL2Q969R5 705 aa7.24□□□□□ -1.25
LMNB1-208ENST00000504788 PLEKHG1Q9ULL1 1385 aa7.24□□□□□ -1.25
LMNB1-208ENST00000504788 ALKQ9UM73 1620 aa7.24□□□□□ -1.25
LMNB1-208ENST00000504788 PRAG1Q86YV5 1406 aa7.23□□□□□ -1.25
LMNB1-208ENST00000504788 XRN1Q8IZH2 1706 aaKnown RBP7.23□□□□□ -1.25
LMNB1-208ENST00000504788 DIP2AQ14689 1571 aa7.23□□□□□ -1.25
LMNB1-208ENST00000504788 LAMC1P11047 1609 aa7.22□□□□□ -1.25
LMNB1-208ENST00000504788 NWD1Q149M9 1564 aa7.22□□□□□ -1.25
LMNB1-208ENST00000504788 NPHP4O75161 1426 aaPredicted RBP7.22□□□□□ -1.25
LMNB1-208ENST00000504788 RGL3Q3MIN7 710 aa7.22□□□□□ -1.25
LMNB1-208ENST00000504788 XIRP1Q702N8 1843 aaKnown RBP7.21□□□□□ -1.25
LMNB1-208ENST00000504788 NCKAP5LQ9HCH0 1330 aa7.21□□□□□ -1.25
LMNB1-208ENST00000504788 NBPF8Q3BBV2 869 aa7.21□□□□□ -1.26
LMNB1-208ENST00000504788 TXNDC2Q86VQ3 553 aa7.21□□□□□ -1.26
LMNB1-208ENST00000504788 KNDC1Q76NI1 1749 aa7.21□□□□□ -1.26
LMNB1-208ENST00000504788 PTPRUQ92729 1446 aa7.21□□□□□ -1.26
LMNB1-208ENST00000504788 NUTM2DQ5VT03 806 aaPredicted RBP7.2□□□□□ -1.26
LMNB1-208ENST00000504788 CCER1Q8TC90 406 aaPredicted RBP7.2□□□□□ -1.26
LMNB1-208ENST00000504788 SPINK5Q9NQ38 1064 aaPredicted RBP7.2□□□□□ -1.26
LMNB1-208ENST00000504788 TIMELESSQ9UNS1 1208 aa7.2□□□□□ -1.26
LMNB1-208ENST00000504788 LTBP4Q8N2S1 1624 aa7.2□□□□□ -1.26
LMNB1-208ENST00000504788 METP08581 1390 aa7.2□□□□□ -1.26
LMNB1-208ENST00000504788 ANKLE2Q86XL3 938 aa7.2□□□□□ -1.26
LMNB1-208ENST00000504788 STAC3Q96MF2 364 aa7.2□□□□□ -1.26
LMNB1-208ENST00000504788 U3KPZ7 1027 aaPredicted RBP7.2□□□□□ -1.26
LMNB1-208ENST00000504788 GPRASP1Q5JY77 1395 aa7.19□□□□□ -1.26
LMNB1-208ENST00000504788 VGFO15240 615 aaPredicted RBP7.19□□□□□ -1.26
LMNB1-208ENST00000504788 PPP1R15AO75807 674 aaPredicted RBP7.19□□□□□ -1.26
LMNB1-208ENST00000504788 CHGAP10645 457 aaKnown RBP7.19□□□□□ -1.26
LMNB1-208ENST00000504788 NEUROD1Q13562 356 aa7.19□□□□□ -1.26
LMNB1-208ENST00000504788 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.19□□□□□ -1.26
LMNB1-208ENST00000504788 DCAF11Q8TEB1 546 aa7.19□□□□□ -1.26
LMNB1-208ENST00000504788 C14orf93Q9H972 538 aaKnown RBP7.19□□□□□ -1.26
LMNB1-208ENST00000504788 ARHGEF28Q8N1W1 1705 aaKnown RBP7.19□□□□□ -1.26
LMNB1-208ENST00000504788 TECPR2O15040 1411 aa7.18□□□□□ -1.26
LMNB1-208ENST00000504788 STAG3Q9UJ98 1225 aa7.18□□□□□ -1.26
LMNB1-208ENST00000504788 TBX22Q9Y458 520 aa7.18□□□□□ -1.26
LMNB1-208ENST00000504788 RALGAPBQ86X10 1494 aa7.18□□□□□ -1.26
LMNB1-208ENST00000504788 CPS1P31327 1500 aa7.18□□□□□ -1.26
LMNB1-208ENST00000504788 PIK3R4Q99570 1358 aa7.18□□□□□ -1.26
LMNB1-208ENST00000504788 ZNF326Q5BKZ1 582 aaKnown RBP7.17□□□□□ -1.26
LMNB1-208ENST00000504788 CFAP70Q5T0N1 1121 aa7.17□□□□□ -1.26
LMNB1-208ENST00000504788 EID1Q9Y6B2 187 aa7.17□□□□□ -1.26
LMNB1-208ENST00000504788 TONSLQ96HA7 1378 aa7.16□□□□□ -1.26
LMNB1-208ENST00000504788 NBPF1Q3BBV0 1214 aa7.16□□□□□ -1.26
LMNB1-208ENST00000504788 SLC26A8Q96RN1 970 aa7.16□□□□□ -1.26
LMNB1-208ENST00000504788 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.16□□□□□ -1.26
LMNB1-208ENST00000504788 DLC1Q96QB1 1528 aa7.16□□□□□ -1.26
LMNB1-208ENST00000504788 KDM2AQ9Y2K7 1162 aa7.15□□□□□ -1.26
LMNB1-208ENST00000504788 PTCH1Q13635 1447 aa7.15□□□□□ -1.26
LMNB1-208ENST00000504788 YTHDC2Q9H6S0 1430 aaKnown RBP7.15□□□□□ -1.26
LMNB1-208ENST00000504788 NKTRP30414 1462 aaKnown RBP7.15□□□□□ -1.26
LMNB1-208ENST00000504788 HDGFP51858 240 aaKnown RBP7.15□□□□□ -1.27
LMNB1-208ENST00000504788 NALCNQ8IZF0 1738 aa7.15□□□□□ -1.27
LMNB1-208ENST00000504788 ABCC11Q96J66 1382 aa7.15□□□□□ -1.27
LMNB1-208ENST00000504788 LRRC7Q96NW7 1537 aa7.14□□□□□ -1.27
LMNB1-208ENST00000504788 TMEM132EQ6IEE7 984 aa7.14□□□□□ -1.27
LMNB1-208ENST00000504788 ZNF335Q9H4Z2 1342 aaPredicted RBP7.14□□□□□ -1.27
LMNB1-208ENST00000504788 LRPPRCP42704 1394 aaKnown RBP7.14□□□□□ -1.27
LMNB1-208ENST00000504788 ROBO2Q9HCK4 1378 aa7.14□□□□□ -1.27
LMNB1-208ENST00000504788 ADGRB2O60241 1585 aa7.13□□□□□ -1.27
LMNB1-208ENST00000504788 KCNA6P17658 529 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms