RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 ZFYVE9O95405 1425 aa19.57■□□□□ 0.72
RNF4-206ENST00000504782 NUP155O75694 1391 aa19.57■□□□□ 0.72
RNF4-206ENST00000504782 RRBP1Q9P2E9 1410 aaKnown RBP19.55■□□□□ 0.72
RNF4-206ENST00000504782 RBM33Q96EV2 1170 aaKnown RBP19.54■□□□□ 0.72
RNF4-206ENST00000504782 RIMS2Q9UQ26 1411 aa19.53■□□□□ 0.72
RNF4-206ENST00000504782 CHGAP10645 457 aaKnown RBP19.53■□□□□ 0.72
RNF4-206ENST00000504782 NUTM2DQ5VT03 806 aaPredicted RBP19.52■□□□□ 0.72
RNF4-206ENST00000504782 KCNA6P17658 529 aa19.51■□□□□ 0.71
RNF4-206ENST00000504782 BCANQ96GW7 911 aa19.51■□□□□ 0.71
RNF4-206ENST00000504782 NWD1Q149M9 1564 aa19.49■□□□□ 0.71
RNF4-206ENST00000504782 CHD2O14647 1828 aaKnown RBP19.49■□□□□ 0.71
RNF4-206ENST00000504782 TMEM94Q12767 1356 aa19.49■□□□□ 0.71
RNF4-206ENST00000504782 SPHKAPQ2M3C7 1700 aa19.49■□□□□ 0.71
RNF4-206ENST00000504782 PLEKHG1Q9ULL1 1385 aa19.48■□□□□ 0.71
RNF4-206ENST00000504782 PROSER2Q86WR7 435 aaPredicted RBP19.47■□□□□ 0.71
RNF4-206ENST00000504782 NAIPQ13075 1403 aa19.47■□□□□ 0.71
RNF4-206ENST00000504782 MED1Q15648 1581 aaPredicted RBP19.47■□□□□ 0.71
RNF4-206ENST00000504782 PPP1R15AO75807 674 aaPredicted RBP19.46■□□□□ 0.71
RNF4-206ENST00000504782 ADAMTS13Q76LX8 1427 aa19.43■□□□□ 0.7
RNF4-206ENST00000504782 NKTRP30414 1462 aaKnown RBP19.42■□□□□ 0.7
RNF4-206ENST00000504782 CLTCL1P53675 1640 aa19.41■□□□□ 0.7
RNF4-206ENST00000504782 HDGFP51858 240 aaKnown RBP19.41■□□□□ 0.7
RNF4-206ENST00000504782 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.4■□□□□ 0.7
RNF4-206ENST00000504782 TBX22Q9Y458 520 aa19.4■□□□□ 0.7
RNF4-206ENST00000504782 ROBO1Q9Y6N7 1651 aa19.4■□□□□ 0.7
RNF4-206ENST00000504782 NRXN3Q9Y4C0 1643 aa19.39■□□□□ 0.69
RNF4-206ENST00000504782 SOCS7O14512 581 aa19.37■□□□□ 0.69
RNF4-206ENST00000504782 HFM1A2PYH4 1435 aa19.36■□□□□ 0.69
RNF4-206ENST00000504782 FAM135BQ49AJ0 1406 aa19.36■□□□□ 0.69
RNF4-206ENST00000504782 PTPRUQ92729 1446 aa19.36■□□□□ 0.69
RNF4-206ENST00000504782 DIP2AQ14689 1571 aa19.36■□□□□ 0.69
RNF4-206ENST00000504782 TRPM2O94759 1503 aa19.35■□□□□ 0.69
RNF4-206ENST00000504782 TRIM52Q96A61 297 aa19.35■□□□□ 0.69
RNF4-206ENST00000504782 KIF1BO60333 1816 aa19.35■□□□□ 0.69
RNF4-206ENST00000504782 MSH6P52701 1360 aa19.33■□□□□ 0.69
RNF4-206ENST00000504782 ZNF326Q5BKZ1 582 aaKnown RBP19.33■□□□□ 0.68
RNF4-206ENST00000504782 NEXMIFQ5QGS0 1516 aa19.33■□□□□ 0.68
RNF4-206ENST00000504782 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.32■□□□□ 0.68
RNF4-206ENST00000504782 SETBP1Q9Y6X0 1596 aa19.31■□□□□ 0.68
RNF4-206ENST00000504782 SLAIN2Q9P270 581 aa19.3■□□□□ 0.68
RNF4-206ENST00000504782 AMOTL2Q9Y2J4 779 aa19.3■□□□□ 0.68
RNF4-206ENST00000504782 XRN1Q8IZH2 1706 aaKnown RBP19.29■□□□□ 0.68
RNF4-206ENST00000504782 PIK3R4Q99570 1358 aa19.29■□□□□ 0.68
RNF4-206ENST00000504782 FOXD1Q16676 465 aa19.28■□□□□ 0.68
RNF4-206ENST00000504782 METP08581 1390 aa19.28■□□□□ 0.68
RNF4-206ENST00000504782 PHLPP1O60346 1717 aa19.28■□□□□ 0.68
RNF4-206ENST00000504782 SLC4A1APQ9BWU0 796 aaKnown RBP19.27■□□□□ 0.68
RNF4-206ENST00000504782 C14orf37Q86TY3 774 aa19.26■□□□□ 0.67
RNF4-206ENST00000504782 NCOA3Q9Y6Q9 1424 aa19.25■□□□□ 0.67
RNF4-206ENST00000504782 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
RNF4-206ENST00000504782 RGS17Q9UGC6 210 aaPredicted RBP19.24■□□□□ 0.67
RNF4-206ENST00000504782 SETD1AO15047 1707 aaKnown RBP19.23■□□□□ 0.67
RNF4-206ENST00000504782 PPLO60437 1756 aa19.22■□□□□ 0.67
RNF4-206ENST00000504782 C19orf44Q9H6X5 657 aa19.22■□□□□ 0.67
RNF4-206ENST00000504782 COL16A1Q07092 1604 aaPredicted RBP19.22■□□□□ 0.67
RNF4-206ENST00000504782 ATF3P18847 181 aa19.19■□□□□ 0.66
RNF4-206ENST00000504782 NALCNQ8IZF0 1738 aa19.18■□□□□ 0.66
RNF4-206ENST00000504782 CADPS2Q86UW7 1296 aa19.18■□□□□ 0.66
RNF4-206ENST00000504782 MPHOSPH9Q99550 1183 aa19.17■□□□□ 0.66
RNF4-206ENST00000504782 VGFO15240 615 aaPredicted RBP19.15■□□□□ 0.66
RNF4-206ENST00000504782 AHDC1Q5TGY3 1603 aaPredicted RBP19.14■□□□□ 0.66
RNF4-206ENST00000504782 BRINP3Q76B58 766 aa19.14■□□□□ 0.65
RNF4-206ENST00000504782 RPGRIP1LQ68CZ1 1315 aa19.13■□□□□ 0.65
RNF4-206ENST00000504782 MST1RQ04912 1400 aa19.13■□□□□ 0.65
RNF4-206ENST00000504782 IFT172Q9UG01 1749 aa19.13■□□□□ 0.65
RNF4-206ENST00000504782 DCCP43146 1447 aa19.12■□□□□ 0.65
RNF4-206ENST00000504782 JCADQ9P266 1359 aa19.12■□□□□ 0.65
RNF4-206ENST00000504782 RGL3Q3MIN7 710 aa19.12■□□□□ 0.65
RNF4-206ENST00000504782 POTEAQ6S8J7 498 aa19.12■□□□□ 0.65
RNF4-206ENST00000504782 ADGRL3Q9HAR2 1447 aa19.11■□□□□ 0.65
RNF4-206ENST00000504782 ROBO2Q9HCK4 1378 aa19.11■□□□□ 0.65
RNF4-206ENST00000504782 ADGRF5Q8IZF2 1346 aa19.11■□□□□ 0.65
RNF4-206ENST00000504782 LRP6O75581 1613 aa19.11■□□□□ 0.65
RNF4-206ENST00000504782 ASXL1Q8IXJ9 1541 aa19.1■□□□□ 0.65
RNF4-206ENST00000504782 CCDC144AA2RUR9 1427 aa19.1■□□□□ 0.65
RNF4-206ENST00000504782 SPATA31E1Q6ZUB1 1445 aa19.1■□□□□ 0.65
RNF4-206ENST00000504782 SETD5Q9C0A6 1442 aa19.09■□□□□ 0.65
RNF4-206ENST00000504782 SHPRHQ149N8 1683 aa19.09■□□□□ 0.65
RNF4-206ENST00000504782 DDX17Q92841 729 aaKnown RBP19.09■□□□□ 0.65
RNF4-206ENST00000504782 NHSL1Q5SYE7 1610 aa19.09■□□□□ 0.65
RNF4-206ENST00000504782 PTCH1Q13635 1447 aa19.07■□□□□ 0.64
RNF4-206ENST00000504782 RAB3GAP2Q9H2M9 1393 aa19.05■□□□□ 0.64
RNF4-206ENST00000504782 PRAG1Q86YV5 1406 aa19.03■□□□□ 0.64
RNF4-206ENST00000504782 C1orf167Q5SNV9 1468 aa19.03■□□□□ 0.64
RNF4-206ENST00000504782 SPATA31A6Q5VVP1 1343 aa19.01■□□□□ 0.63
RNF4-206ENST00000504782 TMEM132EQ6IEE7 984 aa19.01■□□□□ 0.63
RNF4-206ENST00000504782 ORAI2Q96SN7 254 aa19.01■□□□□ 0.63
RNF4-206ENST00000504782 NUTM2BA6NNL0 878 aaPredicted RBP19■□□□□ 0.63
RNF4-206ENST00000504782 NUTM2EB1AL46 878 aaPredicted RBP19■□□□□ 0.63
RNF4-206ENST00000504782 NUTM2AQ8IVF1 878 aaPredicted RBP19■□□□□ 0.63
RNF4-206ENST00000504782 STK26Q9P289 416 aa19■□□□□ 0.63
RNF4-206ENST00000504782 ANKRD30BQ9BXX2 1392 aa18.99■□□□□ 0.63
RNF4-206ENST00000504782 WAPLQ7Z5K2 1190 aa18.99■□□□□ 0.63
RNF4-206ENST00000504782 PIK3C2GO75747 1445 aa18.99■□□□□ 0.63
RNF4-206ENST00000504782 LAMC1P11047 1609 aa18.97■□□□□ 0.63
RNF4-206ENST00000504782 PLEKHH1Q9ULM0 1364 aa18.97■□□□□ 0.63
RNF4-206ENST00000504782 MEX3CQ5U5Q3 659 aaKnown RBP18.97■□□□□ 0.63
RNF4-206ENST00000504782 KNDC1Q76NI1 1749 aa18.97■□□□□ 0.63
RNF4-206ENST00000504782 LRRC59Q96AG4 307 aaKnown RBP18.95■□□□□ 0.62
RNF4-206ENST00000504782 LRPPRCP42704 1394 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms