RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 CD46P15529 392 aa11.63□□□□□ -0.55
TRAPPC13-206ENST00000504751 SH3D19Q5HYK7 790 aa11.63□□□□□ -0.55
TRAPPC13-206ENST00000504751 SULF1Q8IWU6 871 aa11.63□□□□□ -0.55
TRAPPC13-206ENST00000504751 ADGRD1Q6QNK2 874 aa11.62□□□□□ -0.55
TRAPPC13-206ENST00000504751 NBPF3Q9H094 633 aa11.62□□□□□ -0.55
TRAPPC13-206ENST00000504751 DDX11L8A8MPP1 907 aa11.61□□□□□ -0.55
TRAPPC13-206ENST00000504751 LAPTM4BQ86VI4 370 aa11.61□□□□□ -0.55
TRAPPC13-206ENST00000504751 SWT1Q5T5J6 900 aaKnown RBP11.6□□□□□ -0.55
TRAPPC13-206ENST00000504751 HRO43593 1189 aa11.59□□□□□ -0.55
TRAPPC13-206ENST00000504751 RSPH6AQ9H0K4 717 aa11.58□□□□□ -0.56
TRAPPC13-206ENST00000504751 MYSM1Q5VVJ2 828 aa11.57□□□□□ -0.56
TRAPPC13-206ENST00000504751 TBC1D2Q9BYX2 928 aa11.57□□□□□ -0.56
TRAPPC13-206ENST00000504751 SLC10A3P09131 477 aa11.55□□□□□ -0.56
TRAPPC13-206ENST00000504751 SKIV2LQ15477 1246 aaKnown RBP11.55□□□□□ -0.56
TRAPPC13-206ENST00000504751 SAMD7Q7Z3H4 446 aa11.55□□□□□ -0.56
TRAPPC13-206ENST00000504751 MRPL50Q8N5N7 158 aaKnown RBP11.55□□□□□ -0.56
TRAPPC13-206ENST00000504751 RDH13Q8NBN7 331 aa11.55□□□□□ -0.56
TRAPPC13-206ENST00000504751 SPIRE2Q8WWL2 714 aa11.55□□□□□ -0.56
TRAPPC13-206ENST00000504751 ZFRQ96KR1 1074 aaKnown RBP11.55□□□□□ -0.56
TRAPPC13-206ENST00000504751 TIMELESSQ9UNS1 1208 aa11.55□□□□□ -0.56
TRAPPC13-206ENST00000504751 PCMTD1Q96MG8 357 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC13-206ENST00000504751 KRTAP3-3Q9BYR6 98 aa11.54□□□□□ -0.56
TRAPPC13-206ENST00000504751 KRTAP3-2Q9BYR7 98 aa11.54□□□□□ -0.56
TRAPPC13-206ENST00000504751 ANKRD13DQ6ZTN6 518 aa11.53□□□□□ -0.56
TRAPPC13-206ENST00000504751 DIXDC1Q155Q3 683 aa11.52□□□□□ -0.57
TRAPPC13-206ENST00000504751 GCGRP47871 477 aa11.51□□□□□ -0.57
TRAPPC13-206ENST00000504751 SLF2Q8IX21 1173 aa11.51□□□□□ -0.57
TRAPPC13-206ENST00000504751 POLR3EQ9NVU0 708 aa11.51□□□□□ -0.57
TRAPPC13-206ENST00000504751 CLK2P49760 499 aaKnown RBP11.5□□□□□ -0.57
TRAPPC13-206ENST00000504751 HDGFP51858 240 aaKnown RBP11.5□□□□□ -0.57
TRAPPC13-206ENST00000504751 RSPH4AQ5TD94 716 aa11.49□□□□□ -0.57
TRAPPC13-206ENST00000504751 NUTM1Q86Y26 1132 aa11.49□□□□□ -0.57
TRAPPC13-206ENST00000504751 PROCA1Q8NCQ7 364 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC13-206ENST00000504751 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRAPPC13-206ENST00000504751 LIMD1Q9UGP4 676 aa11.49□□□□□ -0.57
TRAPPC13-206ENST00000504751 KDM4AO75164 1064 aa11.48□□□□□ -0.57
TRAPPC13-206ENST00000504751 SLC4A3P48751 1232 aa11.48□□□□□ -0.57
TRAPPC13-206ENST00000504751 RSBN1LQ6PCB5 846 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC13-206ENST00000504751 MOXD2PA6NHM9 499 aa11.46□□□□□ -0.57
TRAPPC13-206ENST00000504751 SPTLC1O15269 473 aa11.46□□□□□ -0.57
TRAPPC13-206ENST00000504751 RNF40O75150 1001 aa11.46□□□□□ -0.57
TRAPPC13-206ENST00000504751 CFHP08603 1231 aa11.46□□□□□ -0.57
TRAPPC13-206ENST00000504751 RIC3Q7Z5B4 369 aa11.46□□□□□ -0.57
TRAPPC13-206ENST00000504751 LRCH3Q96II8 777 aa11.46□□□□□ -0.57
TRAPPC13-206ENST00000504751 HOXA2O43364 376 aa11.45□□□□□ -0.58
TRAPPC13-206ENST00000504751 USP46P62068 366 aa11.45□□□□□ -0.58
TRAPPC13-206ENST00000504751 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC13-206ENST00000504751 GJA5P36382 358 aa11.44□□□□□ -0.58
TRAPPC13-206ENST00000504751 TUSC1Q2TAM9 212 aa11.44□□□□□ -0.58
TRAPPC13-206ENST00000504751 POTEGQ6S5H5 508 aa11.44□□□□□ -0.58
TRAPPC13-206ENST00000504751 ERICH6Q7L0X2 663 aa11.44□□□□□ -0.58
TRAPPC13-206ENST00000504751 ANKK1Q8NFD2 765 aa11.44□□□□□ -0.58
TRAPPC13-206ENST00000504751 NDUFV2P19404 249 aa11.43□□□□□ -0.58
TRAPPC13-206ENST00000504751 FBXO31Q5XUX0 539 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC13-206ENST00000504751 C14orf37Q86TY3 774 aa11.42□□□□□ -0.58
TRAPPC13-206ENST00000504751 STAC3Q96MF2 364 aa11.42□□□□□ -0.58
TRAPPC13-206ENST00000504751 SOWAHBA6NEL2 793 aa11.41□□□□□ -0.58
TRAPPC13-206ENST00000504751 POTEMA6NI47 508 aa11.41□□□□□ -0.58
TRAPPC13-206ENST00000504751 GOLGA8CPA6NN73 597 aa11.4□□□□□ -0.58
TRAPPC13-206ENST00000504751 BCAMP50895 628 aa11.4□□□□□ -0.58
TRAPPC13-206ENST00000504751 FUT2Q10981 343 aa11.4□□□□□ -0.58
TRAPPC13-206ENST00000504751 HLA-CQ95604 372 aa11.4□□□□□ -0.58
TRAPPC13-206ENST00000504751 CDAN1Q8IWY9 1227 aa11.39□□□□□ -0.59
TRAPPC13-206ENST00000504751 NECTIN2Q92692 538 aa11.39□□□□□ -0.59
TRAPPC13-206ENST00000504751 WNT2BQ93097 391 aa11.39□□□□□ -0.59
TRAPPC13-206ENST00000504751 PCDHB15Q9Y5E8 787 aa11.39□□□□□ -0.59
TRAPPC13-206ENST00000504751 QPCTQ16769 361 aa11.38□□□□□ -0.59
TRAPPC13-206ENST00000504751 PPP2R2DQ66LE6 453 aa11.38□□□□□ -0.59
TRAPPC13-206ENST00000504751 ATP1B4Q9UN42 357 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC13-206ENST00000504751 GUCA2AQ02747 115 aa11.37□□□□□ -0.59
TRAPPC13-206ENST00000504751 KMT5BQ4FZB7 885 aa11.37□□□□□ -0.59
TRAPPC13-206ENST00000504751 PCDHGC3Q9UN70 934 aa11.37□□□□□ -0.59
TRAPPC13-206ENST00000504751 HPS5Q9UPZ3 1129 aa11.37□□□□□ -0.59
TRAPPC13-206ENST00000504751 ACTN4O43707 911 aaKnown RBP11.36□□□□□ -0.59
TRAPPC13-206ENST00000504751 LILRB3O75022 631 aa11.36□□□□□ -0.59
TRAPPC13-206ENST00000504751 FDX1P10109 184 aa11.36□□□□□ -0.59
TRAPPC13-206ENST00000504751 RFC5P40937 340 aa11.36□□□□□ -0.59
TRAPPC13-206ENST00000504751 CSPP1Q1MSJ5 1256 aa11.36□□□□□ -0.59
TRAPPC13-206ENST00000504751 TSR3Q9UJK0 312 aaKnown RBP11.36□□□□□ -0.59
TRAPPC13-206ENST00000504751 PRPF38BQ5VTL8 546 aaKnown RBP11.35□□□□□ -0.59
TRAPPC13-206ENST00000504751 ATP6V1AP38606 617 aa11.34□□□□□ -0.59
TRAPPC13-206ENST00000504751 FLIIQ13045 1269 aa11.34□□□□□ -0.59
TRAPPC13-206ENST00000504751 CABLES1Q8TDN4 633 aa11.34□□□□□ -0.59
TRAPPC13-206ENST00000504751 APLP1P51693 650 aa11.33□□□□□ -0.6
TRAPPC13-206ENST00000504751 PPP4CP60510 307 aa11.33□□□□□ -0.6
TRAPPC13-206ENST00000504751 MCM6Q14566 821 aa11.33□□□□□ -0.6
TRAPPC13-206ENST00000504751 GRIPAP1Q4V328 841 aa11.33□□□□□ -0.6
TRAPPC13-206ENST00000504751 THSD4Q6ZMP0 1018 aa11.33□□□□□ -0.6
TRAPPC13-206ENST00000504751 PRR14Q9BWN1 585 aa11.33□□□□□ -0.6
TRAPPC13-206ENST00000504751 HRCP23327 699 aa11.31□□□□□ -0.6
TRAPPC13-206ENST00000504751 RTL5Q5HYW3 569 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC13-206ENST00000504751 MORN1Q5T089 497 aa11.31□□□□□ -0.6
TRAPPC13-206ENST00000504751 ZBTB3Q9H5J0 574 aa11.31□□□□□ -0.6
TRAPPC13-206ENST00000504751 WBP1LQ9NX94 342 aa11.3□□□□□ -0.6
TRAPPC13-206ENST00000504751 PUS10Q3MIT2 529 aaKnown RBP11.29□□□□□ -0.6
TRAPPC13-206ENST00000504751 KCTD12Q96CX2 325 aaKnown RBP11.29□□□□□ -0.6
TRAPPC13-206ENST00000504751 MTMR2Q13614 643 aa11.28□□□□□ -0.6
TRAPPC13-206ENST00000504751 TMEM259Q4ZIN3 620 aa11.28□□□□□ -0.6
TRAPPC13-206ENST00000504751 BANK1Q8NDB2 785 aa11.28□□□□□ -0.6
TRAPPC13-206ENST00000504751 SLC27A5Q9Y2P5 690 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms