RNA–Protein interactions for RNA: ENST00000504417.1

ITGA3-203, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-203ENST00000504417 NWD1Q149M9 1564 aa11□□□□□ -0.65
ITGA3-203ENST00000504417 CLTCL1P53675 1640 aa11□□□□□ -0.65
ITGA3-203ENST00000504417 DCAF8L1A6NGE4 600 aa11□□□□□ -0.65
ITGA3-203ENST00000504417 CERKQ8TCT0 537 aa11□□□□□ -0.65
ITGA3-203ENST00000504417 KIF1BO60333 1816 aa11□□□□□ -0.65
ITGA3-203ENST00000504417 ZFYVE9O95405 1425 aa11□□□□□ -0.65
ITGA3-203ENST00000504417 CPS1P31327 1500 aa10.99□□□□□ -0.65
ITGA3-203ENST00000504417 MYCNP04198 464 aaPredicted RBP10.99□□□□□ -0.65
ITGA3-203ENST00000504417 NRXN3Q9Y4C0 1643 aa10.98□□□□□ -0.65
ITGA3-203ENST00000504417 ZNF335Q9H4Z2 1342 aaPredicted RBP10.98□□□□□ -0.65
ITGA3-203ENST00000504417 TRPM2O94759 1503 aa10.98□□□□□ -0.65
ITGA3-203ENST00000504417 SETD1AO15047 1707 aaKnown RBP10.98□□□□□ -0.65
ITGA3-203ENST00000504417 IFT172Q9UG01 1749 aa10.96□□□□□ -0.65
ITGA3-203ENST00000504417 TMEM2Q9UHN6 1383 aa10.96□□□□□ -0.65
ITGA3-203ENST00000504417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.96□□□□□ -0.65
ITGA3-203ENST00000504417 PPLO60437 1756 aa10.95□□□□□ -0.66
ITGA3-203ENST00000504417 THEMISQ8N1K5 641 aaPredicted RBP10.95□□□□□ -0.66
ITGA3-203ENST00000504417 LTKP29376 864 aa10.94□□□□□ -0.66
ITGA3-203ENST00000504417 IDI1Q13907 227 aa10.94□□□□□ -0.66
ITGA3-203ENST00000504417 DIP2AQ14689 1571 aa10.93□□□□□ -0.66
ITGA3-203ENST00000504417 LRRC7Q96NW7 1537 aa10.93□□□□□ -0.66
ITGA3-203ENST00000504417 ANKLE2Q86XL3 938 aa10.92□□□□□ -0.66
ITGA3-203ENST00000504417 NEXMIFQ5QGS0 1516 aa10.92□□□□□ -0.66
ITGA3-203ENST00000504417 XRN1Q8IZH2 1706 aaKnown RBP10.92□□□□□ -0.66
ITGA3-203ENST00000504417 NUP155O75694 1391 aa10.91□□□□□ -0.66
ITGA3-203ENST00000504417 SETBP1Q9Y6X0 1596 aa10.91□□□□□ -0.66
ITGA3-203ENST00000504417 ATXN8OSP0DMR3 200 aa10.91□□□□□ -0.66
ITGA3-203ENST00000504417 SLC52A1Q9NWF4 448 aa10.9□□□□□ -0.66
ITGA3-203ENST00000504417 ITGAEP38570 1179 aa10.89□□□□□ -0.67
ITGA3-203ENST00000504417 ADAMTS13Q76LX8 1427 aa10.89□□□□□ -0.67
ITGA3-203ENST00000504417 RIMS2Q9UQ26 1411 aa10.89□□□□□ -0.67
ITGA3-203ENST00000504417 PLEKHG1Q9ULL1 1385 aa10.89□□□□□ -0.67
ITGA3-203ENST00000504417 NKTRP30414 1462 aaKnown RBP10.88□□□□□ -0.67
ITGA3-203ENST00000504417 TXNDC2Q86VQ3 553 aa10.85□□□□□ -0.67
ITGA3-203ENST00000504417 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.84□□□□□ -0.67
ITGA3-203ENST00000504417 KNDC1Q76NI1 1749 aa10.82□□□□□ -0.68
ITGA3-203ENST00000504417 NALCNQ8IZF0 1738 aa10.82□□□□□ -0.68
ITGA3-203ENST00000504417 PTPRUQ92729 1446 aa10.82□□□□□ -0.68
ITGA3-203ENST00000504417 EID1Q9Y6B2 187 aa10.81□□□□□ -0.68
ITGA3-203ENST00000504417 U3KPZ7 1027 aaPredicted RBP10.81□□□□□ -0.68
ITGA3-203ENST00000504417 ROBO1Q9Y6N7 1651 aa10.81□□□□□ -0.68
ITGA3-203ENST00000504417 SPATA31E1Q6ZUB1 1445 aa10.81□□□□□ -0.68
ITGA3-203ENST00000504417 PRAG1Q86YV5 1406 aa10.81□□□□□ -0.68
ITGA3-203ENST00000504417 SETD5Q9C0A6 1442 aa10.8□□□□□ -0.68
ITGA3-203ENST00000504417 PIK3R4Q99570 1358 aa10.79□□□□□ -0.68
ITGA3-203ENST00000504417 ASXL1Q8IXJ9 1541 aa10.79□□□□□ -0.68
ITGA3-203ENST00000504417 KCNA6P17658 529 aa10.78□□□□□ -0.68
ITGA3-203ENST00000504417 STAG3Q9UJ98 1225 aa10.78□□□□□ -0.68
ITGA3-203ENST00000504417 RAB3GAP2Q9H2M9 1393 aa10.77□□□□□ -0.68
ITGA3-203ENST00000504417 TMEM94Q12767 1356 aa10.77□□□□□ -0.69
ITGA3-203ENST00000504417 NCOA3Q9Y6Q9 1424 aa10.76□□□□□ -0.69
ITGA3-203ENST00000504417 UBAP1LF5GYI3 381 aa10.76□□□□□ -0.69
ITGA3-203ENST00000504417 SLC26A8Q96RN1 970 aa10.76□□□□□ -0.69
ITGA3-203ENST00000504417 TBX22Q9Y458 520 aa10.76□□□□□ -0.69
ITGA3-203ENST00000504417 MED1Q15648 1581 aaPredicted RBP10.76□□□□□ -0.69
ITGA3-203ENST00000504417 LAMC1P11047 1609 aa10.76□□□□□ -0.69
ITGA3-203ENST00000504417 NHSL1Q5SYE7 1610 aa10.76□□□□□ -0.69
ITGA3-203ENST00000504417 NRXN1Q9ULB1 1477 aa10.75□□□□□ -0.69
ITGA3-203ENST00000504417 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.75□□□□□ -0.69
ITGA3-203ENST00000504417 COL16A1Q07092 1604 aaPredicted RBP10.75□□□□□ -0.69
ITGA3-203ENST00000504417 PHLPP1O60346 1717 aa10.75□□□□□ -0.69
ITGA3-203ENST00000504417 METP08581 1390 aa10.74□□□□□ -0.69
ITGA3-203ENST00000504417 AHDC1Q5TGY3 1603 aaPredicted RBP10.73□□□□□ -0.69
ITGA3-203ENST00000504417 SAMD1Q6SPF0 538 aaPredicted RBP10.73□□□□□ -0.69
ITGA3-203ENST00000504417 PTCH1Q13635 1447 aa10.73□□□□□ -0.69
ITGA3-203ENST00000504417 MYOM2P54296 1465 aa10.73□□□□□ -0.69
ITGA3-203ENST00000504417 NUTM2DQ5VT03 806 aaPredicted RBP10.72□□□□□ -0.69
ITGA3-203ENST00000504417 MPHOSPH9Q99550 1183 aa10.72□□□□□ -0.69
ITGA3-203ENST00000504417 CCDC144AA2RUR9 1427 aa10.72□□□□□ -0.69
ITGA3-203ENST00000504417 DCCP43146 1447 aa10.72□□□□□ -0.69
ITGA3-203ENST00000504417 FAM135BQ49AJ0 1406 aa10.72□□□□□ -0.69
ITGA3-203ENST00000504417 TOM1O60784 492 aa10.71□□□□□ -0.69
ITGA3-203ENST00000504417 PIK3C2GO75747 1445 aa10.71□□□□□ -0.69
ITGA3-203ENST00000504417 CHGAP10645 457 aaKnown RBP10.71□□□□□ -0.69
ITGA3-203ENST00000504417 SHPRHQ149N8 1683 aa10.71□□□□□ -0.69
ITGA3-203ENST00000504417 TRIM52Q96A61 297 aa10.71□□□□□ -0.69
ITGA3-203ENST00000504417 ATF5Q9Y2D1 282 aaPredicted RBP10.71□□□□□ -0.69
ITGA3-203ENST00000504417 ANKRD30BQ9BXX2 1392 aa10.7□□□□□ -0.7
ITGA3-203ENST00000504417 PPP1R15AO75807 674 aaPredicted RBP10.7□□□□□ -0.7
ITGA3-203ENST00000504417 TECPR2O15040 1411 aa10.69□□□□□ -0.7
ITGA3-203ENST00000504417 RPGRIP1LQ68CZ1 1315 aa10.69□□□□□ -0.7
ITGA3-203ENST00000504417 ACIN1Q9UKV3 1341 aaKnown RBP10.69□□□□□ -0.7
ITGA3-203ENST00000504417 HSPA1LP34931 641 aa10.69□□□□□ -0.7
ITGA3-203ENST00000504417 HDGFP51858 240 aaKnown RBP10.69□□□□□ -0.7
ITGA3-203ENST00000504417 RGPD8O14715 1765 aaPredicted RBP10.69□□□□□ -0.7
ITGA3-203ENST00000504417 CDC42BPGQ6DT37 1551 aa10.69□□□□□ -0.7
ITGA3-203ENST00000504417 ADGRL3Q9HAR2 1447 aa10.68□□□□□ -0.7
ITGA3-203ENST00000504417 FMN2Q9NZ56 1722 aa10.68□□□□□ -0.7
ITGA3-203ENST00000504417 KIAA1210Q9ULL0 1709 aa10.68□□□□□ -0.7
ITGA3-203ENST00000504417 HRCP23327 699 aa10.68□□□□□ -0.7
ITGA3-203ENST00000504417 ADGRB1O14514 1584 aa10.68□□□□□ -0.7
ITGA3-203ENST00000504417 MST1RQ04912 1400 aa10.67□□□□□ -0.7
ITGA3-203ENST00000504417 ARHGEF28Q8N1W1 1705 aaKnown RBP10.67□□□□□ -0.7
ITGA3-203ENST00000504417 PROSER2Q86WR7 435 aaPredicted RBP10.67□□□□□ -0.7
ITGA3-203ENST00000504417 RBM33Q96EV2 1170 aaKnown RBP10.67□□□□□ -0.7
ITGA3-203ENST00000504417 MSH6P52701 1360 aa10.66□□□□□ -0.7
ITGA3-203ENST00000504417 ROBO2Q9HCK4 1378 aa10.65□□□□□ -0.7
ITGA3-203ENST00000504417 ADGRF5Q8IZF2 1346 aa10.65□□□□□ -0.7
ITGA3-203ENST00000504417 PIP4K2BP78356 416 aa10.65□□□□□ -0.7
ITGA3-203ENST00000504417 ZNF326Q5BKZ1 582 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms