RNA–Protein interactions for RNA: ENST00000504101.1

POLR2J3-208, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-208ENST00000504101 BCANQ96GW7 911 aa26.34■■□□□ 1.81
POLR2J3-208ENST00000504101 RPRD2Q5VT52 1461 aaKnown RBP26.33■■□□□ 1.81
POLR2J3-208ENST00000504101 MSH6P52701 1360 aa26.33■■□□□ 1.8
POLR2J3-208ENST00000504101 ANKRD50Q9ULJ7 1429 aa26.31■■□□□ 1.8
POLR2J3-208ENST00000504101 ZFYVE9O95405 1425 aa26.29■■□□□ 1.8
POLR2J3-208ENST00000504101 MYO5BQ9ULV0 1848 aa26.28■■□□□ 1.8
POLR2J3-208ENST00000504101 POTEAQ6S8J7 498 aa26.28■■□□□ 1.8
POLR2J3-208ENST00000504101 PLEKHG1Q9ULL1 1385 aa26.28■■□□□ 1.8
POLR2J3-208ENST00000504101 GCC2Q8IWJ2 1684 aa26.28■■□□□ 1.8
POLR2J3-208ENST00000504101 FAM50AQ14320 339 aaKnown RBP26.27■■□□□ 1.8
POLR2J3-208ENST00000504101 RIMS2Q9UQ26 1411 aa26.26■■□□□ 1.79
POLR2J3-208ENST00000504101 PPP1R15AO75807 674 aaPredicted RBP26.26■■□□□ 1.79
POLR2J3-208ENST00000504101 CHD2O14647 1828 aaKnown RBP26.25■■□□□ 1.79
POLR2J3-208ENST00000504101 PHLPP1O60346 1717 aa26.25■■□□□ 1.79
POLR2J3-208ENST00000504101 SLAIN2Q9P270 581 aa26.24■■□□□ 1.79
POLR2J3-208ENST00000504101 TMEM131LA2VDJ0 1609 aa26.23■■□□□ 1.79
POLR2J3-208ENST00000504101 HDGFP51858 240 aaKnown RBP26.22■■□□□ 1.79
POLR2J3-208ENST00000504101 JCADQ9P266 1359 aa26.2■■□□□ 1.79
POLR2J3-208ENST00000504101 UNC13BO14795 1591 aa26.19■■□□□ 1.78
POLR2J3-208ENST00000504101 NCOA3Q9Y6Q9 1424 aa26.16■■□□□ 1.78
POLR2J3-208ENST00000504101 CHGAP10645 457 aaKnown RBP26.16■■□□□ 1.78
POLR2J3-208ENST00000504101 TBX22Q9Y458 520 aa26.16■■□□□ 1.78
POLR2J3-208ENST00000504101 COL16A1Q07092 1604 aaPredicted RBP26.16■■□□□ 1.78
POLR2J3-208ENST00000504101 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.15■■□□□ 1.78
POLR2J3-208ENST00000504101 C14orf37Q86TY3 774 aa26.14■■□□□ 1.78
POLR2J3-208ENST00000504101 E9PCH4 1651 aa26.14■■□□□ 1.78
POLR2J3-208ENST00000504101 DIP2AQ14689 1571 aa26.13■■□□□ 1.77
POLR2J3-208ENST00000504101 ADAMTS13Q76LX8 1427 aa26.13■■□□□ 1.77
POLR2J3-208ENST00000504101 SETD1AO15047 1707 aaKnown RBP26.12■■□□□ 1.77
POLR2J3-208ENST00000504101 NUTM2DQ5VT03 806 aaPredicted RBP26.11■■□□□ 1.77
POLR2J3-208ENST00000504101 PIK3R4Q99570 1358 aa26.08■■□□□ 1.77
POLR2J3-208ENST00000504101 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.08■■□□□ 1.77
POLR2J3-208ENST00000504101 IQGAP3Q86VI3 1631 aa26.08■■□□□ 1.77
POLR2J3-208ENST00000504101 CADPS2Q86UW7 1296 aa26.07■■□□□ 1.76
POLR2J3-208ENST00000504101 LRP6O75581 1613 aa26.06■■□□□ 1.76
POLR2J3-208ENST00000504101 AHDC1Q5TGY3 1603 aaPredicted RBP26.06■■□□□ 1.76
POLR2J3-208ENST00000504101 SPATA31A6Q5VVP1 1343 aa26.06■■□□□ 1.76
POLR2J3-208ENST00000504101 ROCK1Q13464 1354 aa26.06■■□□□ 1.76
POLR2J3-208ENST00000504101 TRPM2O94759 1503 aa26.05■■□□□ 1.76
POLR2J3-208ENST00000504101 ATF3P18847 181 aa26.05■■□□□ 1.76
POLR2J3-208ENST00000504101 C19orf44Q9H6X5 657 aa26.05■■□□□ 1.76
POLR2J3-208ENST00000504101 MEX3CQ5U5Q3 659 aaKnown RBP26.03■■□□□ 1.76
POLR2J3-208ENST00000504101 SHPRHQ149N8 1683 aa26.02■■□□□ 1.76
POLR2J3-208ENST00000504101 NUP155O75694 1391 aa26■■□□□ 1.75
POLR2J3-208ENST00000504101 PTPRUQ92729 1446 aa25.99■■□□□ 1.75
POLR2J3-208ENST00000504101 AMOTL2Q9Y2J4 779 aa25.99■■□□□ 1.75
POLR2J3-208ENST00000504101 ZNF772Q68DY9 489 aaPredicted RBP25.98■■□□□ 1.75
POLR2J3-208ENST00000504101 BRINP3Q76B58 766 aa25.96■■□□□ 1.75
POLR2J3-208ENST00000504101 DCCP43146 1447 aa25.96■■□□□ 1.75
POLR2J3-208ENST00000504101 NRXN3Q9Y4C0 1643 aa25.94■■□□□ 1.74
POLR2J3-208ENST00000504101 XRN1Q8IZH2 1706 aaKnown RBP25.94■■□□□ 1.74
POLR2J3-208ENST00000504101 SETBP1Q9Y6X0 1596 aa25.93■■□□□ 1.74
POLR2J3-208ENST00000504101 TRIM52Q96A61 297 aa25.92■■□□□ 1.74
POLR2J3-208ENST00000504101 ASXL1Q8IXJ9 1541 aa25.92■■□□□ 1.74
POLR2J3-208ENST00000504101 SPHKAPQ2M3C7 1700 aa25.91■■□□□ 1.74
POLR2J3-208ENST00000504101 ITGAEP38570 1179 aa25.9■■□□□ 1.74
POLR2J3-208ENST00000504101 NUTM2BA6NNL0 878 aaPredicted RBP25.88■■□□□ 1.73
POLR2J3-208ENST00000504101 NUTM2EB1AL46 878 aaPredicted RBP25.88■■□□□ 1.73
POLR2J3-208ENST00000504101 NUTM2AQ8IVF1 878 aaPredicted RBP25.88■■□□□ 1.73
POLR2J3-208ENST00000504101 MST1RQ04912 1400 aa25.88■■□□□ 1.73
POLR2J3-208ENST00000504101 ZNF326Q5BKZ1 582 aaKnown RBP25.87■■□□□ 1.73
POLR2J3-208ENST00000504101 UPF1Q92900 1129 aaKnown RBP eCLIP25.87■■□□□ 1.73
POLR2J3-208ENST00000504101 NHSL1Q5SYE7 1610 aa25.86■■□□□ 1.73
POLR2J3-208ENST00000504101 SETD5Q9C0A6 1442 aa25.86■■□□□ 1.73
POLR2J3-208ENST00000504101 RXRBP28702 533 aa25.85■■□□□ 1.73
POLR2J3-208ENST00000504101 METP08581 1390 aa25.84■■□□□ 1.73
POLR2J3-208ENST00000504101 AFF2P51816 1311 aa25.82■■□□□ 1.72
POLR2J3-208ENST00000504101 ADGRL3Q9HAR2 1447 aa25.81■■□□□ 1.72
POLR2J3-208ENST00000504101 CDK12Q9NYV4 1490 aaPredicted RBP25.81■■□□□ 1.72
POLR2J3-208ENST00000504101 NEXMIFQ5QGS0 1516 aa25.79■■□□□ 1.72
POLR2J3-208ENST00000504101 LRRC59Q96AG4 307 aaKnown RBP25.79■■□□□ 1.72
POLR2J3-208ENST00000504101 NALCNQ8IZF0 1738 aa25.79■■□□□ 1.72
POLR2J3-208ENST00000504101 CLTCL1P53675 1640 aa25.78■■□□□ 1.72
POLR2J3-208ENST00000504101 PNPLA6Q8IY17 1366 aa25.75■■□□□ 1.71
POLR2J3-208ENST00000504101 DDX17Q92841 729 aaKnown RBP25.75■■□□□ 1.71
POLR2J3-208ENST00000504101 C8orf37Q96NL8 207 aa25.73■■□□□ 1.71
POLR2J3-208ENST00000504101 PPARGC1BQ86YN6 1023 aaKnown RBP25.72■■□□□ 1.71
POLR2J3-208ENST00000504101 KIF1BO60333 1816 aa25.72■■□□□ 1.71
POLR2J3-208ENST00000504101 C1orf167Q5SNV9 1468 aa25.7■■□□□ 1.7
POLR2J3-208ENST00000504101 RGS12O14924 1447 aa25.7■■□□□ 1.7
POLR2J3-208ENST00000504101 PTCH1Q13635 1447 aa25.69■■□□□ 1.7
POLR2J3-208ENST00000504101 QTRT2Q9H974 415 aaKnown RBP25.68■■□□□ 1.7
POLR2J3-208ENST00000504101 RBM6P78332 1123 aaKnown RBP25.67■■□□□ 1.7
POLR2J3-208ENST00000504101 LAMC1P11047 1609 aa25.66■■□□□ 1.7
POLR2J3-208ENST00000504101 ADAMTS2O95450 1211 aa25.64■■□□□ 1.7
POLR2J3-208ENST00000504101 ROBO2Q9HCK4 1378 aa25.64■■□□□ 1.69
POLR2J3-208ENST00000504101 NAIPQ13075 1403 aa25.63■■□□□ 1.69
POLR2J3-208ENST00000504101 VGFO15240 615 aaPredicted RBP25.62■■□□□ 1.69
POLR2J3-208ENST00000504101 NGLY1Q96IV0 654 aa25.62■■□□□ 1.69
POLR2J3-208ENST00000504101 ORAI2Q96SN7 254 aa25.61■■□□□ 1.69
POLR2J3-208ENST00000504101 PRAG1Q86YV5 1406 aa25.61■■□□□ 1.69
POLR2J3-208ENST00000504101 SOS2Q07890 1332 aaPredicted RBP25.61■■□□□ 1.69
POLR2J3-208ENST00000504101 RRBP1Q9P2E9 1410 aaKnown RBP25.59■■□□□ 1.69
POLR2J3-208ENST00000504101 SRCAPQ6ZRS2 3230 aa25.58■■□□□ 1.69
POLR2J3-208ENST00000504101 HFM1A2PYH4 1435 aa25.56■■□□□ 1.68
POLR2J3-208ENST00000504101 RPGRIP1LQ68CZ1 1315 aa25.56■■□□□ 1.68
POLR2J3-208ENST00000504101 PPLO60437 1756 aa25.54■■□□□ 1.68
POLR2J3-208ENST00000504101 USP21Q9UK80 565 aa25.54■■□□□ 1.68
POLR2J3-208ENST00000504101 COL22A1Q8NFW1 1626 aaPredicted RBP25.53■■□□□ 1.68
POLR2J3-208ENST00000504101 TRPC5Q9UL62 973 aaPredicted RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms