RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 KDM2AQ9Y2K7 1162 aa21.4■■□□□ 1.02
SGCA-204ENST00000504073 NLRP1Q9C000 1473 aa21.39■■□□□ 1.01
SGCA-204ENST00000504073 HDGFP51858 240 aaKnown RBP21.38■■□□□ 1.01
SGCA-204ENST00000504073 IQSEC2Q5JU85 1478 aa21.38■■□□□ 1.01
SGCA-204ENST00000504073 SETD1BQ9UPS6 1966 aaKnown RBP21.37■■□□□ 1.01
SGCA-204ENST00000504073 MYOM2P54296 1465 aa21.35■■□□□ 1.01
SGCA-204ENST00000504073 VGFO15240 615 aaPredicted RBP21.34■■□□□ 1.01
SGCA-204ENST00000504073 KDM5AP29375 1690 aaKnown RBP21.34■■□□□ 1.01
SGCA-204ENST00000504073 PRAG1Q86YV5 1406 aa21.32■■□□□ 1
SGCA-204ENST00000504073 TMEM131LA2VDJ0 1609 aa21.32■■□□□ 1
SGCA-204ENST00000504073 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.31■■□□□ 1
SGCA-204ENST00000504073 RALGAPBQ86X10 1494 aa21.31■■□□□ 1
SGCA-204ENST00000504073 IFT172Q9UG01 1749 aa21.29■■□□□ 1
SGCA-204ENST00000504073 PPLO60437 1756 aa21.29■■□□□ 1
SGCA-204ENST00000504073 NBPF8Q3BBV2 869 aa21.29■■□□□ 1
SGCA-204ENST00000504073 UBAP1LF5GYI3 381 aa21.28■■□□□ 1
SGCA-204ENST00000504073 ROCK2O75116 1388 aaKnown RBP21.27■■□□□ 1
SGCA-204ENST00000504073 ZNF316A6NFI3 1004 aaPredicted RBP21.27■■□□□ 1
SGCA-204ENST00000504073 EIF4G2P78344 907 aaKnown RBP eCLIP21.27■■□□□ 1
SGCA-204ENST00000504073 ZFYVE9O95405 1425 aa21.27■■□□□ 1
SGCA-204ENST00000504073 A2ML1A8K2U0 1454 aa21.26■□□□□ 0.99
SGCA-204ENST00000504073 THEMISQ8N1K5 641 aaPredicted RBP21.25■□□□□ 0.99
SGCA-204ENST00000504073 MYO5BQ9ULV0 1848 aa21.25■□□□□ 0.99
SGCA-204ENST00000504073 NEXMIFQ5QGS0 1516 aa21.24■□□□□ 0.99
SGCA-204ENST00000504073 KIAA1210Q9ULL0 1709 aa21.24■□□□□ 0.99
SGCA-204ENST00000504073 CARD11Q9BXL7 1154 aa21.24■□□□□ 0.99
SGCA-204ENST00000504073 TRPM1Q7Z4N2 1603 aa21.23■□□□□ 0.99
SGCA-204ENST00000504073 MYO3AQ8NEV4 1616 aa21.23■□□□□ 0.99
SGCA-204ENST00000504073 RIMS2Q9UQ26 1411 aa21.22■□□□□ 0.99
SGCA-204ENST00000504073 NRXN1Q9ULB1 1477 aa21.22■□□□□ 0.99
SGCA-204ENST00000504073 UBR1Q8IWV7 1749 aa21.22■□□□□ 0.99
SGCA-204ENST00000504073 EID1Q9Y6B2 187 aa21.22■□□□□ 0.99
SGCA-204ENST00000504073 ZNF335Q9H4Z2 1342 aaPredicted RBP21.22■□□□□ 0.99
SGCA-204ENST00000504073 MED1Q15648 1581 aaPredicted RBP21.2■□□□□ 0.98
SGCA-204ENST00000504073 LAMC1P11047 1609 aa21.2■□□□□ 0.98
SGCA-204ENST00000504073 CEP170BQ9Y4F5 1589 aaPredicted RBP21.19■□□□□ 0.98
SGCA-204ENST00000504073 ADGRF5Q8IZF2 1346 aa21.19■□□□□ 0.98
SGCA-204ENST00000504073 GPRASP1Q5JY77 1395 aa21.19■□□□□ 0.98
SGCA-204ENST00000504073 TMEM2Q9UHN6 1383 aa21.19■□□□□ 0.98
SGCA-204ENST00000504073 PIK3C2GO75747 1445 aa21.19■□□□□ 0.98
SGCA-204ENST00000504073 ZNF142P52746 1687 aaPredicted RBP21.16■□□□□ 0.98
SGCA-204ENST00000504073 EIF3AQ14152 1382 aaKnown RBP21.16■□□□□ 0.98
SGCA-204ENST00000504073 USP47Q96K76 1375 aa21.16■□□□□ 0.98
SGCA-204ENST00000504073 NCKAP5LQ9HCH0 1330 aa21.16■□□□□ 0.98
SGCA-204ENST00000504073 C14orf93Q9H972 538 aaKnown RBP21.15■□□□□ 0.98
SGCA-204ENST00000504073 SETBP1Q9Y6X0 1596 aa21.14■□□□□ 0.97
SGCA-204ENST00000504073 SLC24A1O60721 1099 aa21.13■□□□□ 0.97
SGCA-204ENST00000504073 HSPA5P11021 654 aaKnown RBP21.13■□□□□ 0.97
SGCA-204ENST00000504073 BCANQ96GW7 911 aa21.13■□□□□ 0.97
SGCA-204ENST00000504073 SLIT1O75093 1534 aa21.13■□□□□ 0.97
SGCA-204ENST00000504073 HSPA1LP34931 641 aa21.12■□□□□ 0.97
SGCA-204ENST00000504073 NUTM2DQ5VT03 806 aaPredicted RBP21.12■□□□□ 0.97
SGCA-204ENST00000504073 CFAP70Q5T0N1 1121 aa21.11■□□□□ 0.97
SGCA-204ENST00000504073 TXNDC2Q86VQ3 553 aa21.11■□□□□ 0.97
SGCA-204ENST00000504073 SCAF11Q99590 1463 aaKnown RBP21.1■□□□□ 0.97
SGCA-204ENST00000504073 ARHGAP23Q9P227 1491 aa21.1■□□□□ 0.97
SGCA-204ENST00000504073 NBPF1Q3BBV0 1214 aa21.1■□□□□ 0.97
SGCA-204ENST00000504073 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
SGCA-204ENST00000504073 PLEKHG1Q9ULL1 1385 aa21.08■□□□□ 0.96
SGCA-204ENST00000504073 ANKLE2Q86XL3 938 aa21.07■□□□□ 0.96
SGCA-204ENST00000504073 PIP4K2BP78356 416 aa21.06■□□□□ 0.96
SGCA-204ENST00000504073 IQGAP1P46940 1657 aa21.04■□□□□ 0.96
SGCA-204ENST00000504073 ALKQ9UM73 1620 aa21.04■□□□□ 0.96
SGCA-204ENST00000504073 ST20-MTHFSA0A0A6YYL1 179 aa21.01■□□□□ 0.95
SGCA-204ENST00000504073 PHF23Q9BUL5 403 aaPredicted RBP21.01■□□□□ 0.95
SGCA-204ENST00000504073 CDCA8Q53HL2 280 aa21■□□□□ 0.95
SGCA-204ENST00000504073 HIRIP3Q9BW71 556 aaPredicted RBP21■□□□□ 0.95
SGCA-204ENST00000504073 DIP2AQ14689 1571 aa21■□□□□ 0.95
SGCA-204ENST00000504073 ADGRB1O14514 1584 aa20.99■□□□□ 0.95
SGCA-204ENST00000504073 LTKP29376 864 aa20.99■□□□□ 0.95
SGCA-204ENST00000504073 TMF1P82094 1093 aa20.97■□□□□ 0.95
SGCA-204ENST00000504073 TMEM132EQ6IEE7 984 aa20.97■□□□□ 0.95
SGCA-204ENST00000504073 YTHDC2Q9H6S0 1430 aaKnown RBP20.96■□□□□ 0.95
SGCA-204ENST00000504073 TBX22Q9Y458 520 aa20.96■□□□□ 0.95
SGCA-204ENST00000504073 CENPJQ9HC77 1338 aaPredicted RBP20.96■□□□□ 0.95
SGCA-204ENST00000504073 POLR1AO95602 1720 aaPredicted RBP20.95■□□□□ 0.94
SGCA-204ENST00000504073 TRAK1Q9UPV9 953 aa20.95■□□□□ 0.94
SGCA-204ENST00000504073 LRPPRCP42704 1394 aaKnown RBP20.95■□□□□ 0.94
SGCA-204ENST00000504073 NRXN3Q9Y4C0 1643 aa20.94■□□□□ 0.94
SGCA-204ENST00000504073 TOM1O60784 492 aa20.94■□□□□ 0.94
SGCA-204ENST00000504073 SENP3Q9H4L4 574 aaPredicted RBP20.93■□□□□ 0.94
SGCA-204ENST00000504073 PIK3R4Q99570 1358 aa20.93■□□□□ 0.94
SGCA-204ENST00000504073 SBNO2Q9Y2G9 1366 aa20.93■□□□□ 0.94
SGCA-204ENST00000504073 POGKQ9P215 609 aa20.92■□□□□ 0.94
SGCA-204ENST00000504073 STK26Q9P289 416 aa20.92■□□□□ 0.94
SGCA-204ENST00000504073 ABCC11Q96J66 1382 aa20.92■□□□□ 0.94
SGCA-204ENST00000504073 ADAMTS13Q76LX8 1427 aa20.92■□□□□ 0.94
SGCA-204ENST00000504073 DLC1Q96QB1 1528 aa20.92■□□□□ 0.94
SGCA-204ENST00000504073 SETD1AO15047 1707 aaKnown RBP20.92■□□□□ 0.94
SGCA-204ENST00000504073 DIEXFQ68CQ4 756 aaKnown RBP20.91■□□□□ 0.94
SGCA-204ENST00000504073 CCDC7Q96M83 1385 aa20.91■□□□□ 0.94
SGCA-204ENST00000504073 ASXL1Q8IXJ9 1541 aa20.9■□□□□ 0.94
SGCA-204ENST00000504073 NPHP4O75161 1426 aaPredicted RBP20.9■□□□□ 0.94
SGCA-204ENST00000504073 SIRT1Q96EB6 747 aa20.9■□□□□ 0.94
SGCA-204ENST00000504073 ARHGEF28Q8N1W1 1705 aaKnown RBP20.89■□□□□ 0.93
SGCA-204ENST00000504073 MED14O60244 1454 aa20.88■□□□□ 0.93
SGCA-204ENST00000504073 KNDC1Q76NI1 1749 aa20.88■□□□□ 0.93
SGCA-204ENST00000504073 SLC26A8Q96RN1 970 aa20.88■□□□□ 0.93
SGCA-204ENST00000504073 CPS1P31327 1500 aa20.88■□□□□ 0.93
SGCA-204ENST00000504073 TESK2Q96S53 571 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms