RNA–Protein interactions for RNA: ENST00000503972.5

YIPF3-212, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 933 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-212ENST00000503972 MYOM2P54296 1465 aa22.15■■□□□ 1.14
YIPF3-212ENST00000503972 PPLO60437 1756 aa22.15■■□□□ 1.14
YIPF3-212ENST00000503972 ZNF142P52746 1687 aaPredicted RBP22.15■■□□□ 1.14
YIPF3-212ENST00000503972 NBPF8Q3BBV2 869 aa22.14■■□□□ 1.13
YIPF3-212ENST00000503972 THEMISQ8N1K5 641 aaPredicted RBP22.13■■□□□ 1.13
YIPF3-212ENST00000503972 PRAG1Q86YV5 1406 aa22.13■■□□□ 1.13
YIPF3-212ENST00000503972 RIMS2Q9UQ26 1411 aa22.13■■□□□ 1.13
YIPF3-212ENST00000503972 TMEM2Q9UHN6 1383 aa22.12■■□□□ 1.13
YIPF3-212ENST00000503972 ZFYVE9O95405 1425 aa22.12■■□□□ 1.13
YIPF3-212ENST00000503972 ADGRF5Q8IZF2 1346 aa22.11■■□□□ 1.13
YIPF3-212ENST00000503972 VGFO15240 615 aaPredicted RBP22.11■■□□□ 1.13
YIPF3-212ENST00000503972 NRXN1Q9ULB1 1477 aa22.1■■□□□ 1.13
YIPF3-212ENST00000503972 SLIT1O75093 1534 aa22.1■■□□□ 1.13
YIPF3-212ENST00000503972 HDGFP51858 240 aaKnown RBP22.09■■□□□ 1.13
YIPF3-212ENST00000503972 NUTM2DQ5VT03 806 aaPredicted RBP22.09■■□□□ 1.13
YIPF3-212ENST00000503972 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.09■■□□□ 1.13
YIPF3-212ENST00000503972 ARHGAP23Q9P227 1491 aa22.09■■□□□ 1.13
YIPF3-212ENST00000503972 PIK3C2GO75747 1445 aa22.05■■□□□ 1.12
YIPF3-212ENST00000503972 RALGAPBQ86X10 1494 aa22.03■■□□□ 1.12
YIPF3-212ENST00000503972 LTKP29376 864 aa22.03■■□□□ 1.12
YIPF3-212ENST00000503972 TXNDC2Q86VQ3 553 aa22.03■■□□□ 1.12
YIPF3-212ENST00000503972 EID1Q9Y6B2 187 aa22.03■■□□□ 1.12
YIPF3-212ENST00000503972 TRPM1Q7Z4N2 1603 aa22.02■■□□□ 1.12
YIPF3-212ENST00000503972 KIAA1210Q9ULL0 1709 aa22■■□□□ 1.11
YIPF3-212ENST00000503972 SCAF11Q99590 1463 aaKnown RBP21.99■■□□□ 1.11
YIPF3-212ENST00000503972 CFAP70Q5T0N1 1121 aa21.99■■□□□ 1.11
YIPF3-212ENST00000503972 C14orf93Q9H972 538 aaKnown RBP21.99■■□□□ 1.11
YIPF3-212ENST00000503972 LMTK3Q96Q04 1460 aa21.98■■□□□ 1.11
YIPF3-212ENST00000503972 NBPF1Q3BBV0 1214 aa21.98■■□□□ 1.11
YIPF3-212ENST00000503972 ANKLE2Q86XL3 938 aa21.98■■□□□ 1.11
YIPF3-212ENST00000503972 ROCK2O75116 1388 aaKnown RBP21.98■■□□□ 1.11
YIPF3-212ENST00000503972 PLEKHG1Q9ULL1 1385 aa21.98■■□□□ 1.11
YIPF3-212ENST00000503972 GPRASP1Q5JY77 1395 aa21.97■■□□□ 1.11
YIPF3-212ENST00000503972 SETBP1Q9Y6X0 1596 aa21.95■■□□□ 1.11
YIPF3-212ENST00000503972 LAMC1P11047 1609 aa21.95■■□□□ 1.1
YIPF3-212ENST00000503972 CARD11Q9BXL7 1154 aa21.94■■□□□ 1.1
YIPF3-212ENST00000503972 SENP3Q9H4L4 574 aaPredicted RBP21.94■■□□□ 1.1
YIPF3-212ENST00000503972 ALKQ9UM73 1620 aa21.94■■□□□ 1.1
YIPF3-212ENST00000503972 NRXN3Q9Y4C0 1643 aa21.94■■□□□ 1.1
YIPF3-212ENST00000503972 BCANQ96GW7 911 aa21.92■■□□□ 1.1
YIPF3-212ENST00000503972 IQGAP1P46940 1657 aa21.91■■□□□ 1.1
YIPF3-212ENST00000503972 HSPA2P54652 639 aa21.91■■□□□ 1.1
YIPF3-212ENST00000503972 ADGRB1O14514 1584 aa21.91■■□□□ 1.1
YIPF3-212ENST00000503972 ADAMTS13Q76LX8 1427 aa21.9■■□□□ 1.1
YIPF3-212ENST00000503972 NCKAP5LQ9HCH0 1330 aa21.89■■□□□ 1.1
YIPF3-212ENST00000503972 MED14O60244 1454 aa21.89■■□□□ 1.09
YIPF3-212ENST00000503972 SETD1AO15047 1707 aaKnown RBP21.89■■□□□ 1.09
YIPF3-212ENST00000503972 POLR1AO95602 1720 aaPredicted RBP21.89■■□□□ 1.09
YIPF3-212ENST00000503972 TMEM132EQ6IEE7 984 aa21.88■■□□□ 1.09
YIPF3-212ENST00000503972 ASXL1Q8IXJ9 1541 aa21.87■■□□□ 1.09
YIPF3-212ENST00000503972 NPHP4O75161 1426 aaPredicted RBP21.87■■□□□ 1.09
YIPF3-212ENST00000503972 EIF4G2P78344 907 aaKnown RBP eCLIP21.86■■□□□ 1.09
YIPF3-212ENST00000503972 TBX22Q9Y458 520 aa21.86■■□□□ 1.09
YIPF3-212ENST00000503972 SLC26A8Q96RN1 970 aa21.85■■□□□ 1.09
YIPF3-212ENST00000503972 DIP2AQ14689 1571 aa21.85■■□□□ 1.09
YIPF3-212ENST00000503972 USP47Q96K76 1375 aa21.85■■□□□ 1.09
YIPF3-212ENST00000503972 METP08581 1390 aa21.84■■□□□ 1.09
YIPF3-212ENST00000503972 HSPA5P11021 654 aaKnown RBP21.83■■□□□ 1.09
YIPF3-212ENST00000503972 YTHDC2Q9H6S0 1430 aaKnown RBP21.81■■□□□ 1.08
YIPF3-212ENST00000503972 LRPPRCP42704 1394 aaKnown RBP21.79■■□□□ 1.08
YIPF3-212ENST00000503972 TRAK1Q9UPV9 953 aa21.79■■□□□ 1.08
YIPF3-212ENST00000503972 HIRIP3Q9BW71 556 aaPredicted RBP21.78■■□□□ 1.08
YIPF3-212ENST00000503972 STK26Q9P289 416 aa21.78■■□□□ 1.08
YIPF3-212ENST00000503972 STRCQ7RTU9 1775 aa21.78■■□□□ 1.08
YIPF3-212ENST00000503972 EIF3AQ14152 1382 aaKnown RBP21.77■■□□□ 1.08
YIPF3-212ENST00000503972 PIK3R4Q99570 1358 aa21.77■■□□□ 1.08
YIPF3-212ENST00000503972 ST20-MTHFSA0A0A6YYL1 179 aa21.77■■□□□ 1.08
YIPF3-212ENST00000503972 ABCC11Q96J66 1382 aa21.76■■□□□ 1.07
YIPF3-212ENST00000503972 PTPRUQ92729 1446 aa21.75■■□□□ 1.07
YIPF3-212ENST00000503972 ZNF316A6NFI3 1004 aaPredicted RBP21.74■■□□□ 1.07
YIPF3-212ENST00000503972 DLC1Q96QB1 1528 aa21.74■■□□□ 1.07
YIPF3-212ENST00000503972 TECPR2O15040 1411 aa21.73■■□□□ 1.07
YIPF3-212ENST00000503972 AEBP2Q6ZN18 517 aaPredicted RBP21.73■■□□□ 1.07
YIPF3-212ENST00000503972 KNDC1Q76NI1 1749 aa21.72■■□□□ 1.07
YIPF3-212ENST00000503972 ARHGEF28Q8N1W1 1705 aaKnown RBP21.72■■□□□ 1.07
YIPF3-212ENST00000503972 AMOTL2Q9Y2J4 779 aa21.72■■□□□ 1.07
YIPF3-212ENST00000503972 SIRT1Q96EB6 747 aa21.71■■□□□ 1.07
YIPF3-212ENST00000503972 CENPJQ9HC77 1338 aaPredicted RBP21.71■■□□□ 1.07
YIPF3-212ENST00000503972 CPS1P31327 1500 aa21.7■■□□□ 1.06
YIPF3-212ENST00000503972 TESK2Q96S53 571 aa21.69■■□□□ 1.06
YIPF3-212ENST00000503972 XRN1Q8IZH2 1706 aaKnown RBP21.69■■□□□ 1.06
YIPF3-212ENST00000503972 PRAM1Q96QH2 718 aa21.68■■□□□ 1.06
YIPF3-212ENST00000503972 CHD2O14647 1828 aaKnown RBP21.68■■□□□ 1.06
YIPF3-212ENST00000503972 FAM135BQ49AJ0 1406 aa21.67■■□□□ 1.06
YIPF3-212ENST00000503972 KCNA6P17658 529 aa21.67■■□□□ 1.06
YIPF3-212ENST00000503972 POGKQ9P215 609 aa21.67■■□□□ 1.06
YIPF3-212ENST00000503972 DMRT2Q9Y5R5 561 aa21.67■■□□□ 1.06
YIPF3-212ENST00000503972 PTCH1Q13635 1447 aa21.66■■□□□ 1.06
YIPF3-212ENST00000503972 ROBO2Q9HCK4 1378 aa21.66■■□□□ 1.06
YIPF3-212ENST00000503972 SBNO2Q9Y2G9 1366 aa21.65■■□□□ 1.06
YIPF3-212ENST00000503972 WAPLQ7Z5K2 1190 aa21.65■■□□□ 1.06
YIPF3-212ENST00000503972 NWD1Q149M9 1564 aa21.65■■□□□ 1.06
YIPF3-212ENST00000503972 PLEKHH1Q9ULM0 1364 aa21.64■■□□□ 1.06
YIPF3-212ENST00000503972 QRICH2Q9H0J4 1663 aa21.64■■□□□ 1.05
YIPF3-212ENST00000503972 SLC24A1O60721 1099 aa21.63■■□□□ 1.05
YIPF3-212ENST00000503972 C11orf95C9JLR9 678 aaPredicted RBP21.62■■□□□ 1.05
YIPF3-212ENST00000503972 SAFB2Q14151 953 aaKnown RBP eCLIP21.62■■□□□ 1.05
YIPF3-212ENST00000503972 TMF1P82094 1093 aa21.61■■□□□ 1.05
YIPF3-212ENST00000503972 DISP3Q9P2K9 1392 aa21.59■■□□□ 1.05
YIPF3-212ENST00000503972 NKTRP30414 1462 aaKnown RBP21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms