RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 MED14O60244 1454 aa16.29■□□□□ 0.2
VCAN-205ENST00000503923 ZFYVE9O95405 1425 aa16.29■□□□□ 0.2
VCAN-205ENST00000503923 DHX57Q6P158 1386 aaKnown RBP16.29■□□□□ 0.2
VCAN-205ENST00000503923 LTKP29376 864 aa16.29■□□□□ 0.2
VCAN-205ENST00000503923 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.29■□□□□ 0.2
VCAN-205ENST00000503923 NPHP4O75161 1426 aaPredicted RBP16.28■□□□□ 0.2
VCAN-205ENST00000503923 SPATA31E1Q6ZUB1 1445 aa16.27■□□□□ 0.19
VCAN-205ENST00000503923 PPP1R15AO75807 674 aaPredicted RBP16.26■□□□□ 0.19
VCAN-205ENST00000503923 RPGRIP1LQ68CZ1 1315 aa16.25■□□□□ 0.19
VCAN-205ENST00000503923 IQGAP1P46940 1657 aa16.25■□□□□ 0.19
VCAN-205ENST00000503923 NEXMIFQ5QGS0 1516 aa16.24■□□□□ 0.19
VCAN-205ENST00000503923 RGL3Q3MIN7 710 aa16.23■□□□□ 0.19
VCAN-205ENST00000503923 NUTM2DQ5VT03 806 aaPredicted RBP16.23■□□□□ 0.19
VCAN-205ENST00000503923 PLEKHG1Q9ULL1 1385 aa16.23■□□□□ 0.19
VCAN-205ENST00000503923 PPLO60437 1756 aa16.21■□□□□ 0.19
VCAN-205ENST00000503923 VGFO15240 615 aaPredicted RBP16.21■□□□□ 0.19
VCAN-205ENST00000503923 BCANQ96GW7 911 aa16.2■□□□□ 0.18
VCAN-205ENST00000503923 IFT172Q9UG01 1749 aa16.18■□□□□ 0.18
VCAN-205ENST00000503923 SIN3AQ96ST3 1273 aa16.16■□□□□ 0.18
VCAN-205ENST00000503923 SENP3Q9H4L4 574 aaPredicted RBP16.16■□□□□ 0.18
VCAN-205ENST00000503923 DIP2AQ14689 1571 aa16.16■□□□□ 0.18
VCAN-205ENST00000503923 SETBP1Q9Y6X0 1596 aa16.16■□□□□ 0.18
VCAN-205ENST00000503923 ADAMTS13Q76LX8 1427 aa16.15■□□□□ 0.18
VCAN-205ENST00000503923 SLC26A8Q96RN1 970 aa16.15■□□□□ 0.18
VCAN-205ENST00000503923 TBX22Q9Y458 520 aa16.14■□□□□ 0.17
VCAN-205ENST00000503923 NRXN3Q9Y4C0 1643 aa16.14■□□□□ 0.17
VCAN-205ENST00000503923 MYOM2P54296 1465 aa16.14■□□□□ 0.17
VCAN-205ENST00000503923 ZNF335Q9H4Z2 1342 aaPredicted RBP16.14■□□□□ 0.17
VCAN-205ENST00000503923 NEUROD1Q13562 356 aa16.13■□□□□ 0.17
VCAN-205ENST00000503923 STAC3Q96MF2 364 aa16.13■□□□□ 0.17
VCAN-205ENST00000503923 ADGRF5Q8IZF2 1346 aa16.13■□□□□ 0.17
VCAN-205ENST00000503923 DCAF11Q8TEB1 546 aa16.12■□□□□ 0.17
VCAN-205ENST00000503923 CLSPNQ9HAW4 1339 aa16.12■□□□□ 0.17
VCAN-205ENST00000503923 PIK3C2GO75747 1445 aa16.11■□□□□ 0.17
VCAN-205ENST00000503923 NRXN1Q9ULB1 1477 aa16.1■□□□□ 0.17
VCAN-205ENST00000503923 LTBP4Q8N2S1 1624 aa16.1■□□□□ 0.17
VCAN-205ENST00000503923 PIK3R4Q99570 1358 aa16.1■□□□□ 0.17
VCAN-205ENST00000503923 KCNA6P17658 529 aa16.09■□□□□ 0.17
VCAN-205ENST00000503923 KDM2AQ9Y2K7 1162 aa16.09■□□□□ 0.17
VCAN-205ENST00000503923 CPS1P31327 1500 aa16.09■□□□□ 0.17
VCAN-205ENST00000503923 ALKQ9UM73 1620 aa16.08■□□□□ 0.17
VCAN-205ENST00000503923 CCER1Q8TC90 406 aaPredicted RBP16.08■□□□□ 0.16
VCAN-205ENST00000503923 CHD2O14647 1828 aaKnown RBP16.08■□□□□ 0.16
VCAN-205ENST00000503923 NWD1Q149M9 1564 aa16.07■□□□□ 0.16
VCAN-205ENST00000503923 SETD1AO15047 1707 aaKnown RBP16.07■□□□□ 0.16
VCAN-205ENST00000503923 STRCP1A6NGW2 1772 aa16.07■□□□□ 0.16
VCAN-205ENST00000503923 METP08581 1390 aa16.06■□□□□ 0.16
VCAN-205ENST00000503923 L3MBTL2Q969R5 705 aa16.06■□□□□ 0.16
VCAN-205ENST00000503923 TONSLQ96HA7 1378 aa16.05■□□□□ 0.16
VCAN-205ENST00000503923 LAMC1P11047 1609 aa16.05■□□□□ 0.16
VCAN-205ENST00000503923 NKTRP30414 1462 aaKnown RBP16.04■□□□□ 0.16
VCAN-205ENST00000503923 CERKQ8TCT0 537 aa16.04■□□□□ 0.16
VCAN-205ENST00000503923 C14orf93Q9H972 538 aaKnown RBP16.04■□□□□ 0.16
VCAN-205ENST00000503923 PTPRUQ92729 1446 aa16.03■□□□□ 0.16
VCAN-205ENST00000503923 AMOTL2Q9Y2J4 779 aa16.03■□□□□ 0.16
VCAN-205ENST00000503923 CFAP70Q5T0N1 1121 aa16.02■□□□□ 0.16
VCAN-205ENST00000503923 LRRC7Q96NW7 1537 aa16.01■□□□□ 0.15
VCAN-205ENST00000503923 XRN1Q8IZH2 1706 aaKnown RBP16.01■□□□□ 0.15
VCAN-205ENST00000503923 IQSEC2Q5JU85 1478 aa16.01■□□□□ 0.15
VCAN-205ENST00000503923 PRAG1Q86YV5 1406 aa16.01■□□□□ 0.15
VCAN-205ENST00000503923 PROSER2Q86WR7 435 aaPredicted RBP16■□□□□ 0.15
VCAN-205ENST00000503923 ASXL1Q8IXJ9 1541 aa15.99■□□□□ 0.15
VCAN-205ENST00000503923 TMEM132EQ6IEE7 984 aa15.98■□□□□ 0.15
VCAN-205ENST00000503923 KIAA1210Q9ULL0 1709 aa15.98■□□□□ 0.15
VCAN-205ENST00000503923 TIMELESSQ9UNS1 1208 aa15.98■□□□□ 0.15
VCAN-205ENST00000503923 LRPPRCP42704 1394 aaKnown RBP15.98■□□□□ 0.15
VCAN-205ENST00000503923 TMEM94Q12767 1356 aa15.97■□□□□ 0.15
VCAN-205ENST00000503923 PTCH1Q13635 1447 aa15.96■□□□□ 0.15
VCAN-205ENST00000503923 YTHDC2Q9H6S0 1430 aaKnown RBP15.96■□□□□ 0.15
VCAN-205ENST00000503923 ABCC11Q96J66 1382 aa15.96■□□□□ 0.15
VCAN-205ENST00000503923 ADGRB1O14514 1584 aa15.96■□□□□ 0.14
VCAN-205ENST00000503923 NCOA3Q9Y6Q9 1424 aa15.95■□□□□ 0.14
VCAN-205ENST00000503923 KNDC1Q76NI1 1749 aa15.95■□□□□ 0.14
VCAN-205ENST00000503923 STK26Q9P289 416 aa15.95■□□□□ 0.14
VCAN-205ENST00000503923 XIRP1Q702N8 1843 aaKnown RBP15.95■□□□□ 0.14
VCAN-205ENST00000503923 TECPR2O15040 1411 aa15.94■□□□□ 0.14
VCAN-205ENST00000503923 RBM33Q96EV2 1170 aaKnown RBP15.94■□□□□ 0.14
VCAN-205ENST00000503923 ROBO2Q9HCK4 1378 aa15.93■□□□□ 0.14
VCAN-205ENST00000503923 NBPF8Q3BBV2 869 aa15.92■□□□□ 0.14
VCAN-205ENST00000503923 SIRT1Q96EB6 747 aa15.92■□□□□ 0.14
VCAN-205ENST00000503923 TRPM1Q7Z4N2 1603 aa15.92■□□□□ 0.14
VCAN-205ENST00000503923 DLC1Q96QB1 1528 aa15.91■□□□□ 0.14
VCAN-205ENST00000503923 NBPF1Q3BBV0 1214 aa15.91■□□□□ 0.14
VCAN-205ENST00000503923 C14orf37Q86TY3 774 aa15.91■□□□□ 0.14
VCAN-205ENST00000503923 MSH6P52701 1360 aa15.9■□□□□ 0.14
VCAN-205ENST00000503923 FAM135BQ49AJ0 1406 aa15.9■□□□□ 0.14
VCAN-205ENST00000503923 ROCK2O75116 1388 aaKnown RBP15.89■□□□□ 0.13
VCAN-205ENST00000503923 C19orf44Q9H6X5 657 aa15.89■□□□□ 0.13
VCAN-205ENST00000503923 TRAK1Q9UPV9 953 aa15.89■□□□□ 0.13
VCAN-205ENST00000503923 UBAP1LF5GYI3 381 aa15.88■□□□□ 0.13
VCAN-205ENST00000503923 TOM1O60784 492 aa15.88■□□□□ 0.13
VCAN-205ENST00000503923 ADGRL3Q9HAR2 1447 aa15.87■□□□□ 0.13
VCAN-205ENST00000503923 RALGAPBQ86X10 1494 aa15.87■□□□□ 0.13
VCAN-205ENST00000503923 WAPLQ7Z5K2 1190 aa15.87■□□□□ 0.13
VCAN-205ENST00000503923 FBXO41Q8TF61 875 aa15.86■□□□□ 0.13
VCAN-205ENST00000503923 PRAM1Q96QH2 718 aa15.86■□□□□ 0.13
VCAN-205ENST00000503923 POGKQ9P215 609 aa15.86■□□□□ 0.13
VCAN-205ENST00000503923 GPRASP1Q5JY77 1395 aa15.86■□□□□ 0.13
VCAN-205ENST00000503923 PLEKHH1Q9ULM0 1364 aa15.86■□□□□ 0.13
VCAN-205ENST00000503923 DCCP43146 1447 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms