RNA–Protein interactions for RNA: ENST00000503180.5

DDR1-248, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-248ENST00000503180 NEURL4Q96JN8 1562 aa23.17■■□□□ 1.3
DDR1-248ENST00000503180 CLTCL1P53675 1640 aa23.16■■□□□ 1.3
DDR1-248ENST00000503180 RPGRIP1LQ68CZ1 1315 aa23.15■■□□□ 1.3
DDR1-248ENST00000503180 NUTM2DQ5VT03 806 aaPredicted RBP23.15■■□□□ 1.3
DDR1-248ENST00000503180 ZFYVE9O95405 1425 aa23.15■■□□□ 1.3
DDR1-248ENST00000503180 KIF1BO60333 1816 aa23.14■■□□□ 1.29
DDR1-248ENST00000503180 MYO5BQ9ULV0 1848 aa23.14■■□□□ 1.29
DDR1-248ENST00000503180 IQGAP1P46940 1657 aa23.13■■□□□ 1.29
DDR1-248ENST00000503180 VGFO15240 615 aaPredicted RBP23.13■■□□□ 1.29
DDR1-248ENST00000503180 ZNF335Q9H4Z2 1342 aaPredicted RBP23.12■■□□□ 1.29
DDR1-248ENST00000503180 RGL3Q3MIN7 710 aa23.12■■□□□ 1.29
DDR1-248ENST00000503180 ANKRD30BQ9BXX2 1392 aa23.12■■□□□ 1.29
DDR1-248ENST00000503180 PLEKHG1Q9ULL1 1385 aa23.12■■□□□ 1.29
DDR1-248ENST00000503180 CERKQ8TCT0 537 aa23.11■■□□□ 1.29
DDR1-248ENST00000503180 SLC26A8Q96RN1 970 aa23.11■■□□□ 1.29
DDR1-248ENST00000503180 SENP3Q9H4L4 574 aaPredicted RBP23.09■■□□□ 1.29
DDR1-248ENST00000503180 TBX22Q9Y458 520 aa23.08■■□□□ 1.29
DDR1-248ENST00000503180 PCGF6Q9BYE7 350 aa23.05■■□□□ 1.28
DDR1-248ENST00000503180 SPATA31E1Q6ZUB1 1445 aa23.03■■□□□ 1.28
DDR1-248ENST00000503180 KCNA6P17658 529 aa23.02■■□□□ 1.28
DDR1-248ENST00000503180 LTBP4Q8N2S1 1624 aa23.01■■□□□ 1.27
DDR1-248ENST00000503180 NEXMIFQ5QGS0 1516 aa23■■□□□ 1.27
DDR1-248ENST00000503180 CPS1P31327 1500 aa22.98■■□□□ 1.27
DDR1-248ENST00000503180 STAC3Q96MF2 364 aa22.97■■□□□ 1.27
DDR1-248ENST00000503180 PIK3R4Q99570 1358 aa22.96■■□□□ 1.27
DDR1-248ENST00000503180 ADAMTS13Q76LX8 1427 aa22.96■■□□□ 1.27
DDR1-248ENST00000503180 DIP2AQ14689 1571 aa22.93■■□□□ 1.26
DDR1-248ENST00000503180 DHX57Q6P158 1386 aaKnown RBP22.93■■□□□ 1.26
DDR1-248ENST00000503180 PROSER2Q86WR7 435 aaPredicted RBP22.93■■□□□ 1.26
DDR1-248ENST00000503180 FBXO41Q8TF61 875 aa22.93■■□□□ 1.26
DDR1-248ENST00000503180 IQSEC2Q5JU85 1478 aa22.92■■□□□ 1.26
DDR1-248ENST00000503180 ADGRF5Q8IZF2 1346 aa22.92■■□□□ 1.26
DDR1-248ENST00000503180 DCAF11Q8TEB1 546 aa22.92■■□□□ 1.26
DDR1-248ENST00000503180 SETBP1Q9Y6X0 1596 aa22.92■■□□□ 1.26
DDR1-248ENST00000503180 AMOTL2Q9Y2J4 779 aa22.91■■□□□ 1.26
DDR1-248ENST00000503180 PPLO60437 1756 aa22.91■■□□□ 1.26
DDR1-248ENST00000503180 KDM2AQ9Y2K7 1162 aa22.9■■□□□ 1.26
DDR1-248ENST00000503180 NEUROD1Q13562 356 aa22.88■■□□□ 1.25
DDR1-248ENST00000503180 SIN3AQ96ST3 1273 aa22.87■■□□□ 1.25
DDR1-248ENST00000503180 LRRC7Q96NW7 1537 aa22.87■■□□□ 1.25
DDR1-248ENST00000503180 METP08581 1390 aa22.86■■□□□ 1.25
DDR1-248ENST00000503180 UBAP1LF5GYI3 381 aa22.85■■□□□ 1.25
DDR1-248ENST00000503180 TOM1O60784 492 aa22.85■■□□□ 1.25
DDR1-248ENST00000503180 STRCP1A6NGW2 1772 aa22.85■■□□□ 1.25
DDR1-248ENST00000503180 CHD2O14647 1828 aaKnown RBP22.85■■□□□ 1.25
DDR1-248ENST00000503180 NRXN3Q9Y4C0 1643 aa22.84■■□□□ 1.25
DDR1-248ENST00000503180 NKTRP30414 1462 aaKnown RBP22.84■■□□□ 1.25
DDR1-248ENST00000503180 ALKQ9UM73 1620 aa22.83■■□□□ 1.25
DDR1-248ENST00000503180 C14orf93Q9H972 538 aaKnown RBP22.83■■□□□ 1.25
DDR1-248ENST00000503180 TMEM94Q12767 1356 aa22.83■■□□□ 1.25
DDR1-248ENST00000503180 IFT172Q9UG01 1749 aa22.82■■□□□ 1.24
DDR1-248ENST00000503180 MYOM2P54296 1465 aa22.82■■□□□ 1.24
DDR1-248ENST00000503180 NWD1Q149M9 1564 aa22.81■■□□□ 1.24
DDR1-248ENST00000503180 C14orf37Q86TY3 774 aa22.81■■□□□ 1.24
DDR1-248ENST00000503180 PIK3C2GO75747 1445 aa22.81■■□□□ 1.24
DDR1-248ENST00000503180 ILDR1Q86SU0 546 aaPredicted RBP22.8■■□□□ 1.24
DDR1-248ENST00000503180 RBM33Q96EV2 1170 aaKnown RBP22.8■■□□□ 1.24
DDR1-248ENST00000503180 PTPRUQ92729 1446 aa22.8■■□□□ 1.24
DDR1-248ENST00000503180 CFAP70Q5T0N1 1121 aa22.79■■□□□ 1.24
DDR1-248ENST00000503180 NCOA3Q9Y6Q9 1424 aa22.78■■□□□ 1.24
DDR1-248ENST00000503180 NRXN1Q9ULB1 1477 aa22.78■■□□□ 1.24
DDR1-248ENST00000503180 TMEM132EQ6IEE7 984 aa22.77■■□□□ 1.24
DDR1-248ENST00000503180 L3MBTL2Q969R5 705 aa22.77■■□□□ 1.24
DDR1-248ENST00000503180 STK26Q9P289 416 aa22.76■■□□□ 1.23
DDR1-248ENST00000503180 MSH6P52701 1360 aa22.76■■□□□ 1.23
DDR1-248ENST00000503180 C19orf44Q9H6X5 657 aa22.75■■□□□ 1.23
DDR1-248ENST00000503180 PIP4K2BP78356 416 aa22.72■■□□□ 1.23
DDR1-248ENST00000503180 SCAF1Q9H7N4 1312 aaKnown RBP22.72■■□□□ 1.23
DDR1-248ENST00000503180 ATF3P18847 181 aa22.71■■□□□ 1.23
DDR1-248ENST00000503180 CLSPNQ9HAW4 1339 aa22.71■■□□□ 1.23
DDR1-248ENST00000503180 LRPPRCP42704 1394 aaKnown RBP22.71■■□□□ 1.23
DDR1-248ENST00000503180 ABCC11Q96J66 1382 aa22.71■■□□□ 1.23
DDR1-248ENST00000503180 TONSLQ96HA7 1378 aa22.7■■□□□ 1.22
DDR1-248ENST00000503180 SETD1AO15047 1707 aaKnown RBP22.7■■□□□ 1.22
DDR1-248ENST00000503180 XRN1Q8IZH2 1706 aaKnown RBP22.69■■□□□ 1.22
DDR1-248ENST00000503180 LAMC1P11047 1609 aa22.69■■□□□ 1.22
DDR1-248ENST00000503180 CADPS2Q86UW7 1296 aa22.69■■□□□ 1.22
DDR1-248ENST00000503180 CCER1Q8TC90 406 aaPredicted RBP22.69■■□□□ 1.22
DDR1-248ENST00000503180 SIRT1Q96EB6 747 aa22.69■■□□□ 1.22
DDR1-248ENST00000503180 YTHDC2Q9H6S0 1430 aaKnown RBP22.68■■□□□ 1.22
DDR1-248ENST00000503180 PTCH1Q13635 1447 aa22.67■■□□□ 1.22
DDR1-248ENST00000503180 ROBO2Q9HCK4 1378 aa22.67■■□□□ 1.22
DDR1-248ENST00000503180 XIRP1Q702N8 1843 aaKnown RBP22.67■■□□□ 1.22
DDR1-248ENST00000503180 SLAIN2Q9P270 581 aa22.66■■□□□ 1.22
DDR1-248ENST00000503180 PRAG1Q86YV5 1406 aa22.65■■□□□ 1.22
DDR1-248ENST00000503180 WAPLQ7Z5K2 1190 aa22.64■■□□□ 1.21
DDR1-248ENST00000503180 TECPR2O15040 1411 aa22.64■■□□□ 1.21
DDR1-248ENST00000503180 POGKQ9P215 609 aa22.63■■□□□ 1.21
DDR1-248ENST00000503180 TRAK1Q9UPV9 953 aa22.62■■□□□ 1.21
DDR1-248ENST00000503180 TIMELESSQ9UNS1 1208 aa22.61■■□□□ 1.21
DDR1-248ENST00000503180 FAM135BQ49AJ0 1406 aa22.6■■□□□ 1.21
DDR1-248ENST00000503180 ASXL1Q8IXJ9 1541 aa22.6■■□□□ 1.21
DDR1-248ENST00000503180 DCCP43146 1447 aa22.59■■□□□ 1.21
DDR1-248ENST00000503180 ADGRL3Q9HAR2 1447 aa22.59■■□□□ 1.21
DDR1-248ENST00000503180 NBPF1Q3BBV0 1214 aa22.59■■□□□ 1.21
DDR1-248ENST00000503180 PRAM1Q96QH2 718 aa22.59■■□□□ 1.21
DDR1-248ENST00000503180 ADGRB1O14514 1584 aa22.57■■□□□ 1.2
DDR1-248ENST00000503180 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.57■■□□□ 1.2
DDR1-248ENST00000503180 KIAA1210Q9ULL0 1709 aa22.56■■□□□ 1.2
DDR1-248ENST00000503180 KNDC1Q76NI1 1749 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms