RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 PROSER2Q86WR7 435 aaPredicted RBP21.41■■□□□ 1.02
DDR1-247ENST00000502955 ANKRD50Q9ULJ7 1429 aa21.4■■□□□ 1.02
DDR1-247ENST00000502955 PLEKHG1Q9ULL1 1385 aa21.38■■□□□ 1.01
DDR1-247ENST00000502955 CHD2O14647 1828 aaKnown RBP21.37■■□□□ 1.01
DDR1-247ENST00000502955 MSH6P52701 1360 aa21.36■■□□□ 1.01
DDR1-247ENST00000502955 TMEM131LA2VDJ0 1609 aa21.36■■□□□ 1.01
DDR1-247ENST00000502955 MYO5BQ9ULV0 1848 aa21.36■■□□□ 1.01
DDR1-247ENST00000502955 GCC2Q8IWJ2 1684 aa21.35■■□□□ 1.01
DDR1-247ENST00000502955 RBM33Q96EV2 1170 aaKnown RBP21.35■■□□□ 1.01
DDR1-247ENST00000502955 HDGFP51858 240 aaKnown RBP21.34■■□□□ 1.01
DDR1-247ENST00000502955 UNC13BO14795 1591 aa21.33■■□□□ 1.01
DDR1-247ENST00000502955 RIMS2Q9UQ26 1411 aa21.33■■□□□ 1.01
DDR1-247ENST00000502955 NCOA3Q9Y6Q9 1424 aa21.33■■□□□ 1.01
DDR1-247ENST00000502955 BCANQ96GW7 911 aa21.32■■□□□ 1
DDR1-247ENST00000502955 SLAIN2Q9P270 581 aa21.32■■□□□ 1
DDR1-247ENST00000502955 FAM50AQ14320 339 aaKnown RBP21.31■■□□□ 1
DDR1-247ENST00000502955 POTEAQ6S8J7 498 aa21.31■■□□□ 1
DDR1-247ENST00000502955 PHLPP1O60346 1717 aa21.3■■□□□ 1
DDR1-247ENST00000502955 TBX22Q9Y458 520 aa21.3■■□□□ 1
DDR1-247ENST00000502955 JCADQ9P266 1359 aa21.28■■□□□ 1
DDR1-247ENST00000502955 PPP1R15AO75807 674 aaPredicted RBP21.28■■□□□ 1
DDR1-247ENST00000502955 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.28■■□□□ 1
DDR1-247ENST00000502955 E9PCH4 1651 aa21.28■■□□□ 1
DDR1-247ENST00000502955 DIP2AQ14689 1571 aa21.27■■□□□ 1
DDR1-247ENST00000502955 ADAMTS13Q76LX8 1427 aa21.26■□□□□ 0.99
DDR1-247ENST00000502955 COL16A1Q07092 1604 aaPredicted RBP21.26■□□□□ 0.99
DDR1-247ENST00000502955 ROCK1Q13464 1354 aa21.25■□□□□ 0.99
DDR1-247ENST00000502955 PIK3R4Q99570 1358 aa21.25■□□□□ 0.99
DDR1-247ENST00000502955 IQGAP3Q86VI3 1631 aa21.25■□□□□ 0.99
DDR1-247ENST00000502955 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.21■□□□□ 0.99
DDR1-247ENST00000502955 AHDC1Q5TGY3 1603 aaPredicted RBP21.2■□□□□ 0.98
DDR1-247ENST00000502955 CADPS2Q86UW7 1296 aa21.19■□□□□ 0.98
DDR1-247ENST00000502955 C19orf44Q9H6X5 657 aa21.19■□□□□ 0.98
DDR1-247ENST00000502955 CHGAP10645 457 aaKnown RBP21.18■□□□□ 0.98
DDR1-247ENST00000502955 SPATA31A6Q5VVP1 1343 aa21.18■□□□□ 0.98
DDR1-247ENST00000502955 TRPM2O94759 1503 aa21.18■□□□□ 0.98
DDR1-247ENST00000502955 SHPRHQ149N8 1683 aa21.15■□□□□ 0.98
DDR1-247ENST00000502955 LRP6O75581 1613 aa21.15■□□□□ 0.98
DDR1-247ENST00000502955 C14orf37Q86TY3 774 aa21.15■□□□□ 0.98
DDR1-247ENST00000502955 DCCP43146 1447 aa21.14■□□□□ 0.98
DDR1-247ENST00000502955 NUP155O75694 1391 aa21.14■□□□□ 0.98
DDR1-247ENST00000502955 ATF3P18847 181 aa21.14■□□□□ 0.97
DDR1-247ENST00000502955 NUTM2DQ5VT03 806 aaPredicted RBP21.14■□□□□ 0.97
DDR1-247ENST00000502955 SETD1AO15047 1707 aaKnown RBP21.14■□□□□ 0.97
DDR1-247ENST00000502955 PTPRUQ92729 1446 aa21.13■□□□□ 0.97
DDR1-247ENST00000502955 SETBP1Q9Y6X0 1596 aa21.12■□□□□ 0.97
DDR1-247ENST00000502955 AMOTL2Q9Y2J4 779 aa21.12■□□□□ 0.97
DDR1-247ENST00000502955 NRXN3Q9Y4C0 1643 aa21.11■□□□□ 0.97
DDR1-247ENST00000502955 XRN1Q8IZH2 1706 aaKnown RBP21.11■□□□□ 0.97
DDR1-247ENST00000502955 ZNF772Q68DY9 489 aaPredicted RBP21.1■□□□□ 0.97
DDR1-247ENST00000502955 BRINP3Q76B58 766 aa21.09■□□□□ 0.97
DDR1-247ENST00000502955 SPHKAPQ2M3C7 1700 aa21.09■□□□□ 0.97
DDR1-247ENST00000502955 MEX3CQ5U5Q3 659 aaKnown RBP21.06■□□□□ 0.96
DDR1-247ENST00000502955 ASXL1Q8IXJ9 1541 aa21.05■□□□□ 0.96
DDR1-247ENST00000502955 SETD5Q9C0A6 1442 aa21.04■□□□□ 0.96
DDR1-247ENST00000502955 NHSL1Q5SYE7 1610 aa21.04■□□□□ 0.96
DDR1-247ENST00000502955 MST1RQ04912 1400 aa21.04■□□□□ 0.96
DDR1-247ENST00000502955 METP08581 1390 aa21.01■□□□□ 0.95
DDR1-247ENST00000502955 CDK12Q9NYV4 1490 aaPredicted RBP21.01■□□□□ 0.95
DDR1-247ENST00000502955 NEXMIFQ5QGS0 1516 aa20.99■□□□□ 0.95
DDR1-247ENST00000502955 ADGRL3Q9HAR2 1447 aa20.99■□□□□ 0.95
DDR1-247ENST00000502955 ITGAEP38570 1179 aa20.98■□□□□ 0.95
DDR1-247ENST00000502955 ZNF326Q5BKZ1 582 aaKnown RBP20.98■□□□□ 0.95
DDR1-247ENST00000502955 UPF1Q92900 1129 aaKnown RBP eCLIP20.98■□□□□ 0.95
DDR1-247ENST00000502955 CLTCL1P53675 1640 aa20.97■□□□□ 0.95
DDR1-247ENST00000502955 RXRBP28702 533 aa20.97■□□□□ 0.95
DDR1-247ENST00000502955 LRRC59Q96AG4 307 aaKnown RBP20.96■□□□□ 0.95
DDR1-247ENST00000502955 NALCNQ8IZF0 1738 aa20.95■□□□□ 0.94
DDR1-247ENST00000502955 TRIM52Q96A61 297 aa20.95■□□□□ 0.94
DDR1-247ENST00000502955 NUTM2BA6NNL0 878 aaPredicted RBP20.94■□□□□ 0.94
DDR1-247ENST00000502955 NUTM2EB1AL46 878 aaPredicted RBP20.94■□□□□ 0.94
DDR1-247ENST00000502955 NUTM2AQ8IVF1 878 aaPredicted RBP20.94■□□□□ 0.94
DDR1-247ENST00000502955 KIF1BO60333 1816 aa20.93■□□□□ 0.94
DDR1-247ENST00000502955 AFF2P51816 1311 aa20.93■□□□□ 0.94
DDR1-247ENST00000502955 LAMC1P11047 1609 aa20.93■□□□□ 0.94
DDR1-247ENST00000502955 PTCH1Q13635 1447 aa20.91■□□□□ 0.94
DDR1-247ENST00000502955 PNPLA6Q8IY17 1366 aa20.91■□□□□ 0.94
DDR1-247ENST00000502955 PRAG1Q86YV5 1406 aa20.9■□□□□ 0.94
DDR1-247ENST00000502955 C1orf167Q5SNV9 1468 aa20.89■□□□□ 0.94
DDR1-247ENST00000502955 NAIPQ13075 1403 aa20.88■□□□□ 0.93
DDR1-247ENST00000502955 RRBP1Q9P2E9 1410 aaKnown RBP20.88■□□□□ 0.93
DDR1-247ENST00000502955 DDX17Q92841 729 aaKnown RBP20.86■□□□□ 0.93
DDR1-247ENST00000502955 VGFO15240 615 aaPredicted RBP20.85■□□□□ 0.93
DDR1-247ENST00000502955 RBM6P78332 1123 aaKnown RBP20.84■□□□□ 0.93
DDR1-247ENST00000502955 C8orf37Q96NL8 207 aa20.84■□□□□ 0.93
DDR1-247ENST00000502955 RGS12O14924 1447 aa20.84■□□□□ 0.93
DDR1-247ENST00000502955 ROBO2Q9HCK4 1378 aa20.84■□□□□ 0.93
DDR1-247ENST00000502955 SOS2Q07890 1332 aaPredicted RBP20.83■□□□□ 0.93
DDR1-247ENST00000502955 RPGRIP1LQ68CZ1 1315 aa20.83■□□□□ 0.93
DDR1-247ENST00000502955 PPARGC1BQ86YN6 1023 aaKnown RBP20.83■□□□□ 0.93
DDR1-247ENST00000502955 QTRT2Q9H974 415 aaKnown RBP20.83■□□□□ 0.93
DDR1-247ENST00000502955 HFM1A2PYH4 1435 aa20.81■□□□□ 0.92
DDR1-247ENST00000502955 PPLO60437 1756 aa20.8■□□□□ 0.92
DDR1-247ENST00000502955 COL22A1Q8NFW1 1626 aaPredicted RBP20.78■□□□□ 0.92
DDR1-247ENST00000502955 ORAI2Q96SN7 254 aa20.78■□□□□ 0.92
DDR1-247ENST00000502955 NGLY1Q96IV0 654 aa20.77■□□□□ 0.92
DDR1-247ENST00000502955 CDC42BPGQ6DT37 1551 aa20.76■□□□□ 0.91
DDR1-247ENST00000502955 ADAMTS2O95450 1211 aa20.75■□□□□ 0.91
DDR1-247ENST00000502955 FNBP4Q8N3X1 1017 aaPredicted RBP20.75■□□□□ 0.91
DDR1-247ENST00000502955 SRCAPQ6ZRS2 3230 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms