RNA–Protein interactions for RNA: ENST00000502604.5

CDK7-202, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-202ENST00000502604 TMEM131LA2VDJ0 1609 aa18.13■□□□□ 0.49
CDK7-202ENST00000502604 TOM1O60784 492 aa18.13■□□□□ 0.49
CDK7-202ENST00000502604 SLC52A1Q9NWF4 448 aa18.13■□□□□ 0.49
CDK7-202ENST00000502604 RRBP1Q9P2E9 1410 aaKnown RBP18.09■□□□□ 0.49
CDK7-202ENST00000502604 NUP155O75694 1391 aa18.08■□□□□ 0.49
CDK7-202ENST00000502604 ZFYVE9O95405 1425 aa18.08■□□□□ 0.49
CDK7-202ENST00000502604 HSPA1LP34931 641 aa18.07■□□□□ 0.48
CDK7-202ENST00000502604 SLC26A8Q96RN1 970 aa18.07■□□□□ 0.48
CDK7-202ENST00000502604 SPHKAPQ2M3C7 1700 aa18.05■□□□□ 0.48
CDK7-202ENST00000502604 RIMS2Q9UQ26 1411 aa18.04■□□□□ 0.48
CDK7-202ENST00000502604 ILDR2Q71H61 639 aa18.04■□□□□ 0.48
CDK7-202ENST00000502604 NWD1Q149M9 1564 aa18.04■□□□□ 0.48
CDK7-202ENST00000502604 CHD2O14647 1828 aaKnown RBP18.03■□□□□ 0.48
CDK7-202ENST00000502604 CHGAP10645 457 aaKnown RBP18.01■□□□□ 0.47
CDK7-202ENST00000502604 PLEKHG1Q9ULL1 1385 aa18.01■□□□□ 0.47
CDK7-202ENST00000502604 BCANQ96GW7 911 aa18.01■□□□□ 0.47
CDK7-202ENST00000502604 NAIPQ13075 1403 aa18■□□□□ 0.47
CDK7-202ENST00000502604 PPP1R15AO75807 674 aaPredicted RBP18■□□□□ 0.47
CDK7-202ENST00000502604 KCNA6P17658 529 aa18■□□□□ 0.47
CDK7-202ENST00000502604 TMEM94Q12767 1356 aa17.99■□□□□ 0.47
CDK7-202ENST00000502604 NKTRP30414 1462 aaKnown RBP17.99■□□□□ 0.47
CDK7-202ENST00000502604 MED1Q15648 1581 aaPredicted RBP17.99■□□□□ 0.47
CDK7-202ENST00000502604 NUTM2DQ5VT03 806 aaPredicted RBP17.98■□□□□ 0.47
CDK7-202ENST00000502604 RBM33Q96EV2 1170 aaKnown RBP17.98■□□□□ 0.47
CDK7-202ENST00000502604 PROSER2Q86WR7 435 aaPredicted RBP17.95■□□□□ 0.46
CDK7-202ENST00000502604 CLTCL1P53675 1640 aa17.95■□□□□ 0.46
CDK7-202ENST00000502604 HDGFP51858 240 aaKnown RBP17.95■□□□□ 0.46
CDK7-202ENST00000502604 ADAMTS13Q76LX8 1427 aa17.94■□□□□ 0.46
CDK7-202ENST00000502604 DIP2AQ14689 1571 aa17.94■□□□□ 0.46
CDK7-202ENST00000502604 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.94■□□□□ 0.46
CDK7-202ENST00000502604 ROBO1Q9Y6N7 1651 aa17.93■□□□□ 0.46
CDK7-202ENST00000502604 HFM1A2PYH4 1435 aa17.93■□□□□ 0.46
CDK7-202ENST00000502604 NRXN3Q9Y4C0 1643 aa17.93■□□□□ 0.46
CDK7-202ENST00000502604 TRPM2O94759 1503 aa17.92■□□□□ 0.46
CDK7-202ENST00000502604 KIF1BO60333 1816 aa17.92■□□□□ 0.46
CDK7-202ENST00000502604 TBX22Q9Y458 520 aa17.9■□□□□ 0.46
CDK7-202ENST00000502604 FAM135BQ49AJ0 1406 aa17.89■□□□□ 0.45
CDK7-202ENST00000502604 MSH6P52701 1360 aa17.88■□□□□ 0.45
CDK7-202ENST00000502604 SETBP1Q9Y6X0 1596 aa17.88■□□□□ 0.45
CDK7-202ENST00000502604 NEXMIFQ5QGS0 1516 aa17.87■□□□□ 0.45
CDK7-202ENST00000502604 SOCS7O14512 581 aa17.86■□□□□ 0.45
CDK7-202ENST00000502604 ZNF326Q5BKZ1 582 aaKnown RBP17.86■□□□□ 0.45
CDK7-202ENST00000502604 TRIM52Q96A61 297 aa17.86■□□□□ 0.45
CDK7-202ENST00000502604 PTPRUQ92729 1446 aa17.86■□□□□ 0.45
CDK7-202ENST00000502604 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.86■□□□□ 0.45
CDK7-202ENST00000502604 XRN1Q8IZH2 1706 aaKnown RBP17.85■□□□□ 0.45
CDK7-202ENST00000502604 PIK3R4Q99570 1358 aa17.85■□□□□ 0.45
CDK7-202ENST00000502604 PHLPP1O60346 1717 aa17.83■□□□□ 0.44
CDK7-202ENST00000502604 NCOA3Q9Y6Q9 1424 aa17.81■□□□□ 0.44
CDK7-202ENST00000502604 SLC4A1APQ9BWU0 796 aaKnown RBP17.81■□□□□ 0.44
CDK7-202ENST00000502604 C14orf37Q86TY3 774 aa17.8■□□□□ 0.44
CDK7-202ENST00000502604 SLAIN2Q9P270 581 aa17.8■□□□□ 0.44
CDK7-202ENST00000502604 AMOTL2Q9Y2J4 779 aa17.8■□□□□ 0.44
CDK7-202ENST00000502604 SETD1AO15047 1707 aaKnown RBP17.79■□□□□ 0.44
CDK7-202ENST00000502604 PPLO60437 1756 aa17.79■□□□□ 0.44
CDK7-202ENST00000502604 METP08581 1390 aa17.79■□□□□ 0.44
CDK7-202ENST00000502604 COL16A1Q07092 1604 aaPredicted RBP17.76■□□□□ 0.43
CDK7-202ENST00000502604 C19orf44Q9H6X5 657 aa17.75■□□□□ 0.43
CDK7-202ENST00000502604 NALCNQ8IZF0 1738 aa17.75■□□□□ 0.43
CDK7-202ENST00000502604 ATF3P18847 181 aa17.73■□□□□ 0.43
CDK7-202ENST00000502604 CADPS2Q86UW7 1296 aa17.73■□□□□ 0.43
CDK7-202ENST00000502604 AHDC1Q5TGY3 1603 aaPredicted RBP17.72■□□□□ 0.43
CDK7-202ENST00000502604 DCCP43146 1447 aa17.71■□□□□ 0.43
CDK7-202ENST00000502604 IFT172Q9UG01 1749 aa17.71■□□□□ 0.43
CDK7-202ENST00000502604 RGS17Q9UGC6 210 aaPredicted RBP17.7■□□□□ 0.42
CDK7-202ENST00000502604 CCDC144AA2RUR9 1427 aa17.69■□□□□ 0.42
CDK7-202ENST00000502604 VGFO15240 615 aaPredicted RBP17.69■□□□□ 0.42
CDK7-202ENST00000502604 MPHOSPH9Q99550 1183 aa17.69■□□□□ 0.42
CDK7-202ENST00000502604 ADGRL3Q9HAR2 1447 aa17.68■□□□□ 0.42
CDK7-202ENST00000502604 RPGRIP1LQ68CZ1 1315 aa17.68■□□□□ 0.42
CDK7-202ENST00000502604 JCADQ9P266 1359 aa17.67■□□□□ 0.42
CDK7-202ENST00000502604 MST1RQ04912 1400 aa17.67■□□□□ 0.42
CDK7-202ENST00000502604 ASXL1Q8IXJ9 1541 aa17.67■□□□□ 0.42
CDK7-202ENST00000502604 BRINP3Q76B58 766 aa17.67■□□□□ 0.42
CDK7-202ENST00000502604 SHPRHQ149N8 1683 aa17.67■□□□□ 0.42
CDK7-202ENST00000502604 SPATA31E1Q6ZUB1 1445 aa17.66■□□□□ 0.42
CDK7-202ENST00000502604 NHSL1Q5SYE7 1610 aa17.66■□□□□ 0.42
CDK7-202ENST00000502604 PTCH1Q13635 1447 aa17.66■□□□□ 0.42
CDK7-202ENST00000502604 SETD5Q9C0A6 1442 aa17.65■□□□□ 0.42
CDK7-202ENST00000502604 ROBO2Q9HCK4 1378 aa17.64■□□□□ 0.41
CDK7-202ENST00000502604 LRP6O75581 1613 aa17.63■□□□□ 0.41
CDK7-202ENST00000502604 PRAG1Q86YV5 1406 aa17.63■□□□□ 0.41
CDK7-202ENST00000502604 ADGRF5Q8IZF2 1346 aa17.63■□□□□ 0.41
CDK7-202ENST00000502604 RGL3Q3MIN7 710 aa17.63■□□□□ 0.41
CDK7-202ENST00000502604 MAPK8IP2Q13387 824 aaPredicted RBP17.62■□□□□ 0.41
CDK7-202ENST00000502604 RAB3GAP2Q9H2M9 1393 aa17.61■□□□□ 0.41
CDK7-202ENST00000502604 POTEAQ6S8J7 498 aa17.6■□□□□ 0.41
CDK7-202ENST00000502604 ANKRD30BQ9BXX2 1392 aa17.58■□□□□ 0.4
CDK7-202ENST00000502604 KNDC1Q76NI1 1749 aa17.58■□□□□ 0.4
CDK7-202ENST00000502604 SPATA31A6Q5VVP1 1343 aa17.58■□□□□ 0.4
CDK7-202ENST00000502604 C1orf167Q5SNV9 1468 aa17.57■□□□□ 0.4
CDK7-202ENST00000502604 DDX17Q92841 729 aaKnown RBP17.57■□□□□ 0.4
CDK7-202ENST00000502604 PIK3C2GO75747 1445 aa17.57■□□□□ 0.4
CDK7-202ENST00000502604 LAMC1P11047 1609 aa17.56■□□□□ 0.4
CDK7-202ENST00000502604 PPP4R3CPQ6ZMV5 832 aa17.56■□□□□ 0.4
CDK7-202ENST00000502604 ACIN1Q9UKV3 1341 aaKnown RBP17.55■□□□□ 0.4
CDK7-202ENST00000502604 CDC42BPGQ6DT37 1551 aa17.54■□□□□ 0.4
CDK7-202ENST00000502604 MEX3CQ5U5Q3 659 aaKnown RBP17.53■□□□□ 0.4
CDK7-202ENST00000502604 TECPR2O15040 1411 aa17.53■□□□□ 0.4
CDK7-202ENST00000502604 TMEM132EQ6IEE7 984 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms