RNA–Protein interactions for RNA: ENST00000501412.2

RAP1B-213, Transcript of RAP1B, member of RAS oncogene family, human

TSL 2

Gene RAP1B, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-213	ENST00000501412	PRAG1	Q86YV5	1406 aa		31.88	■■■□□ 2.69
RAP1B-213	ENST00000501412	KDM2A	Q9Y2K7	1162 aa		31.88	■■■□□ 2.69
RAP1B-213	ENST00000501412	ZNF326	Q5BKZ1	582 aa	Known RBP	31.86	■■■□□ 2.69
RAP1B-213	ENST00000501412	NRXN1	Q9ULB1	1477 aa		31.85	■■■□□ 2.69
RAP1B-213	ENST00000501412	ZNF142	P52746	1687 aa	Predicted RBP	31.85	■■■□□ 2.69
RAP1B-213	ENST00000501412	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	31.84	■■■□□ 2.69
RAP1B-213	ENST00000501412	STAG3	Q9UJ98	1225 aa		31.83	■■■□□ 2.69
RAP1B-213	ENST00000501412	LMTK3	Q96Q04	1460 aa		31.82	■■■□□ 2.68
RAP1B-213	ENST00000501412	ZFYVE9	O95405	1425 aa		31.81	■■■□□ 2.68
RAP1B-213	ENST00000501412	ADGRF5	Q8IZF2	1346 aa		31.79	■■■□□ 2.68
RAP1B-213	ENST00000501412	TRPM1	Q7Z4N2	1603 aa		31.77	■■■□□ 2.68
RAP1B-213	ENST00000501412	RIMS2	Q9UQ26	1411 aa		31.77	■■■□□ 2.68
RAP1B-213	ENST00000501412	TMEM2	Q9UHN6	1383 aa		31.77	■■■□□ 2.68
RAP1B-213	ENST00000501412	RALGAPB	Q86X10	1494 aa		31.76	■■■□□ 2.68
RAP1B-213	ENST00000501412	ARHGAP23	Q9P227	1491 aa		31.75	■■■□□ 2.67
RAP1B-213	ENST00000501412	SLIT1	O75093	1534 aa		31.75	■■■□□ 2.67
RAP1B-213	ENST00000501412	PIK3C2G	O75747	1445 aa		31.74	■■■□□ 2.67
RAP1B-213	ENST00000501412	VGF	O15240	615 aa	Predicted RBP	31.72	■■■□□ 2.67
RAP1B-213	ENST00000501412	KIAA1210	Q9ULL0	1709 aa		31.7	■■■□□ 2.67
RAP1B-213	ENST00000501412	NUTM2D	Q5VT03	806 aa	Predicted RBP	31.7	■■■□□ 2.66
RAP1B-213	ENST00000501412	THEMIS	Q8N1K5	641 aa	Predicted RBP	31.69	■■■□□ 2.66
RAP1B-213	ENST00000501412	GPRASP1	Q5JY77	1395 aa		31.66	■■■□□ 2.66
RAP1B-213	ENST00000501412	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	31.65	■■■□□ 2.66
RAP1B-213	ENST00000501412	HSPA2	P54652	639 aa		31.63	■■■□□ 2.65
RAP1B-213	ENST00000501412	NBPF1	Q3BBV0	1214 aa		31.63	■■■□□ 2.65
RAP1B-213	ENST00000501412	LTK	P29376	864 aa		31.62	■■■□□ 2.65
RAP1B-213	ENST00000501412	LAMC1	P11047	1609 aa		31.61	■■■□□ 2.65
RAP1B-213	ENST00000501412	HDGF	P51858	240 aa	Known RBP	31.61	■■■□□ 2.65
RAP1B-213	ENST00000501412	C14orf93	Q9H972	538 aa	Known RBP	31.61	■■■□□ 2.65
RAP1B-213	ENST00000501412	NRXN3	Q9Y4C0	1643 aa		31.61	■■■□□ 2.65
RAP1B-213	ENST00000501412	ROCK2	O75116	1388 aa	Known RBP	31.6	■■■□□ 2.65
RAP1B-213	ENST00000501412	CFAP70	Q5T0N1	1121 aa		31.6	■■■□□ 2.65
RAP1B-213	ENST00000501412	SETBP1	Q9Y6X0	1596 aa		31.59	■■■□□ 2.65
RAP1B-213	ENST00000501412	SCAF11	Q99590	1463 aa	Known RBP	31.56	■■■□□ 2.64
RAP1B-213	ENST00000501412	TXNDC2	Q86VQ3	553 aa		31.56	■■■□□ 2.64
RAP1B-213	ENST00000501412	ADGRB1	O14514	1584 aa		31.56	■■■□□ 2.64
RAP1B-213	ENST00000501412	PLEKHG1	Q9ULL1	1385 aa		31.56	■■■□□ 2.64
RAP1B-213	ENST00000501412	ALK	Q9UM73	1620 aa		31.55	■■■□□ 2.64
RAP1B-213	ENST00000501412	SETD1A	O15047	1707 aa	Known RBP	31.55	■■■□□ 2.64
RAP1B-213	ENST00000501412	IQGAP1	P46940	1657 aa		31.54	■■■□□ 2.64
RAP1B-213	ENST00000501412	EID1	Q9Y6B2	187 aa		31.53	■■■□□ 2.64
RAP1B-213	ENST00000501412	CARD11	Q9BXL7	1154 aa		31.52	■■■□□ 2.64
RAP1B-213	ENST00000501412	ASXL1	Q8IXJ9	1541 aa		31.52	■■■□□ 2.64
RAP1B-213	ENST00000501412	ADAMTS13	Q76LX8	1427 aa		31.49	■■■□□ 2.63
RAP1B-213	ENST00000501412	MED14	O60244	1454 aa		31.48	■■■□□ 2.63
RAP1B-213	ENST00000501412	USP47	Q96K76	1375 aa		31.48	■■■□□ 2.63
RAP1B-213	ENST00000501412	EIF4G2	P78344	907 aa	Known RBP eCLIP	31.46	■■■□□ 2.63
RAP1B-213	ENST00000501412	ANKLE2	Q86XL3	938 aa		31.46	■■■□□ 2.63
RAP1B-213	ENST00000501412	SENP3	Q9H4L4	574 aa	Predicted RBP	31.46	■■■□□ 2.63
RAP1B-213	ENST00000501412	POLR1A	O95602	1720 aa	Predicted RBP	31.45	■■■□□ 2.62
RAP1B-213	ENST00000501412	HSPA5	P11021	654 aa	Known RBP	31.45	■■■□□ 2.62
RAP1B-213	ENST00000501412	TMEM132E	Q6IEE7	984 aa		31.42	■■■□□ 2.62
RAP1B-213	ENST00000501412	STRC	Q7RTU9	1775 aa		31.41	■■■□□ 2.62
RAP1B-213	ENST00000501412	DIP2A	Q14689	1571 aa		31.4	■■■□□ 2.62
RAP1B-213	ENST00000501412	MET	P08581	1390 aa		31.39	■■■□□ 2.62
RAP1B-213	ENST00000501412	ZNF316	A6NFI3	1004 aa	Predicted RBP	31.37	■■■□□ 2.61
RAP1B-213	ENST00000501412	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.37	■■■□□ 2.61
RAP1B-213	ENST00000501412	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.35	■■■□□ 2.61
RAP1B-213	ENST00000501412	NPHP4	O75161	1426 aa	Predicted RBP	31.35	■■■□□ 2.61
RAP1B-213	ENST00000501412	TBX22	Q9Y458	520 aa		31.34	■■■□□ 2.61
RAP1B-213	ENST00000501412	NCKAP5L	Q9HCH0	1330 aa		31.34	■■■□□ 2.61
RAP1B-213	ENST00000501412	BCAN	Q96GW7	911 aa		31.33	■■■□□ 2.61
RAP1B-213	ENST00000501412	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.32	■■■□□ 2.6
RAP1B-213	ENST00000501412	ST20-MTHFS	A0A0A6YYL1	179 aa		31.32	■■■□□ 2.6
RAP1B-213	ENST00000501412	SLC26A8	Q96RN1	970 aa		31.32	■■■□□ 2.6
RAP1B-213	ENST00000501412	LRPPRC	P42704	1394 aa	Known RBP	31.32	■■■□□ 2.6
RAP1B-213	ENST00000501412	ILDR1	Q86SU0	546 aa	Predicted RBP	31.3	■■■□□ 2.6
RAP1B-213	ENST00000501412	EIF3A	Q14152	1382 aa	Known RBP	31.28	■■■□□ 2.6
RAP1B-213	ENST00000501412	TRAK1	Q9UPV9	953 aa		31.28	■■■□□ 2.6
RAP1B-213	ENST00000501412	ABCC11	Q96J66	1382 aa		31.28	■■■□□ 2.6
RAP1B-213	ENST00000501412	KNDC1	Q76NI1	1749 aa		31.27	■■■□□ 2.6
RAP1B-213	ENST00000501412	DLC1	Q96QB1	1528 aa		31.27	■■■□□ 2.6
RAP1B-213	ENST00000501412	TECPR2	O15040	1411 aa		31.27	■■■□□ 2.6
RAP1B-213	ENST00000501412	PTPRU	Q92729	1446 aa		31.27	■■■□□ 2.6
RAP1B-213	ENST00000501412	TESK2	Q96S53	571 aa		31.26	■■■□□ 2.59
RAP1B-213	ENST00000501412	PIK3R4	Q99570	1358 aa		31.24	■■■□□ 2.59
RAP1B-213	ENST00000501412	DMRT2	Q9Y5R5	561 aa		31.24	■■■□□ 2.59
RAP1B-213	ENST00000501412	STK26	Q9P289	416 aa		31.23	■■■□□ 2.59
RAP1B-213	ENST00000501412	CPS1	P31327	1500 aa		31.22	■■■□□ 2.59
RAP1B-213	ENST00000501412	XRN1	Q8IZH2	1706 aa	Known RBP	31.21	■■■□□ 2.59
RAP1B-213	ENST00000501412	C11orf95	C9JLR9	678 aa	Predicted RBP	31.2	■■■□□ 2.58
RAP1B-213	ENST00000501412	SBNO2	Q9Y2G9	1366 aa		31.2	■■■□□ 2.58
RAP1B-213	ENST00000501412	CHD2	O14647	1828 aa	Known RBP	31.19	■■■□□ 2.58
RAP1B-213	ENST00000501412	CENPJ	Q9HC77	1338 aa	Predicted RBP	31.18	■■■□□ 2.58
RAP1B-213	ENST00000501412	QRICH2	Q9H0J4	1663 aa		31.18	■■■□□ 2.58
RAP1B-213	ENST00000501412	SIRT1	Q96EB6	747 aa		31.17	■■■□□ 2.58
RAP1B-213	ENST00000501412	FAM135B	Q49AJ0	1406 aa		31.16	■■■□□ 2.58
RAP1B-213	ENST00000501412	ROBO2	Q9HCK4	1378 aa		31.14	■■■□□ 2.58
RAP1B-213	ENST00000501412	AMOTL2	Q9Y2J4	779 aa		31.14	■■■□□ 2.57
RAP1B-213	ENST00000501412	PTCH1	Q13635	1447 aa		31.13	■■■□□ 2.57
RAP1B-213	ENST00000501412	PRAM1	Q96QH2	718 aa		31.13	■■■□□ 2.57
RAP1B-213	ENST00000501412	WASHC2A	Q641Q2	1341 aa		31.13	■■■□□ 2.57
RAP1B-213	ENST00000501412	PLEKHH1	Q9ULM0	1364 aa		31.12	■■■□□ 2.57
RAP1B-213	ENST00000501412	NWD1	Q149M9	1564 aa		31.11	■■■□□ 2.57
RAP1B-213	ENST00000501412	DISP3	Q9P2K9	1392 aa		31.11	■■■□□ 2.57
RAP1B-213	ENST00000501412	CCDC7	Q96M83	1385 aa		31.1	■■■□□ 2.57
RAP1B-213	ENST00000501412	FBXO41	Q8TF61	875 aa		31.09	■■■□□ 2.57
RAP1B-213	ENST00000501412	KIF7	Q2M1P5	1343 aa		31.09	■■■□□ 2.57
RAP1B-213	ENST00000501412	WAPL	Q7Z5K2	1190 aa		31.08	■■■□□ 2.57
RAP1B-213	ENST00000501412	KCNA6	P17658	529 aa		31.07	■■■□□ 2.56

Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms