RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 THEMISQ8N1K5 641 aaPredicted RBP28.2■■■□□ 2.1
LINC01550-201ENST00000499006 TMEM2Q9UHN6 1383 aa28.19■■■□□ 2.1
LINC01550-201ENST00000499006 LMTK3Q96Q04 1460 aa28.18■■■□□ 2.1
LINC01550-201ENST00000499006 MYOM2P54296 1465 aa28.18■■■□□ 2.1
LINC01550-201ENST00000499006 DCAF11Q8TEB1 546 aa28.17■■■□□ 2.1
LINC01550-201ENST00000499006 RIMS2Q9UQ26 1411 aa28.17■■■□□ 2.1
LINC01550-201ENST00000499006 STAC3Q96MF2 364 aa28.15■■■□□ 2.1
LINC01550-201ENST00000499006 NRXN1Q9ULB1 1477 aa28.13■■■□□ 2.09
LINC01550-201ENST00000499006 ZEB1P37275 1124 aaPredicted RBP28.13■■■□□ 2.09
LINC01550-201ENST00000499006 PPP1R15AO75807 674 aaPredicted RBP28.12■■■□□ 2.09
LINC01550-201ENST00000499006 POLR1AO95602 1720 aaPredicted RBP28.12■■■□□ 2.09
LINC01550-201ENST00000499006 KDM2AQ9Y2K7 1162 aa28.11■■■□□ 2.09
LINC01550-201ENST00000499006 VGFO15240 615 aaPredicted RBP28.09■■■□□ 2.09
LINC01550-201ENST00000499006 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.08■■■□□ 2.09
LINC01550-201ENST00000499006 PRAG1Q86YV5 1406 aa28.08■■■□□ 2.09
LINC01550-201ENST00000499006 ADGRF5Q8IZF2 1346 aa28.08■■■□□ 2.09
LINC01550-201ENST00000499006 LTKP29376 864 aa28.08■■■□□ 2.09
LINC01550-201ENST00000499006 HDGFP51858 240 aaKnown RBP28.08■■■□□ 2.09
LINC01550-201ENST00000499006 NUTM2DQ5VT03 806 aaPredicted RBP28.08■■■□□ 2.09
LINC01550-201ENST00000499006 SCAF11Q99590 1463 aaKnown RBP28.06■■■□□ 2.08
LINC01550-201ENST00000499006 PIK3C2GO75747 1445 aa28.06■■■□□ 2.08
LINC01550-201ENST00000499006 KIAA1210Q9ULL0 1709 aa28.05■■■□□ 2.08
LINC01550-201ENST00000499006 TRPM1Q7Z4N2 1603 aa28.04■■■□□ 2.08
LINC01550-201ENST00000499006 NRXN3Q9Y4C0 1643 aa28.04■■■□□ 2.08
LINC01550-201ENST00000499006 TXNDC2Q86VQ3 553 aa28.04■■■□□ 2.08
LINC01550-201ENST00000499006 NBPF8Q3BBV2 869 aa28.03■■■□□ 2.08
LINC01550-201ENST00000499006 EID1Q9Y6B2 187 aa28.03■■■□□ 2.08
LINC01550-201ENST00000499006 IQGAP1P46940 1657 aa28.03■■■□□ 2.08
LINC01550-201ENST00000499006 SETBP1Q9Y6X0 1596 aa28.03■■■□□ 2.08
LINC01550-201ENST00000499006 STRCQ7RTU9 1775 aa28.02■■■□□ 2.08
LINC01550-201ENST00000499006 LAMC1P11047 1609 aa28.01■■■□□ 2.07
LINC01550-201ENST00000499006 SETD1AO15047 1707 aaKnown RBP28.01■■■□□ 2.07
LINC01550-201ENST00000499006 HSPA2P54652 639 aa28.01■■■□□ 2.07
LINC01550-201ENST00000499006 ANKLE2Q86XL3 938 aa28.01■■■□□ 2.07
LINC01550-201ENST00000499006 PLEKHG1Q9ULL1 1385 aa28.01■■■□□ 2.07
LINC01550-201ENST00000499006 MED14O60244 1454 aa27.98■■■□□ 2.07
LINC01550-201ENST00000499006 ALKQ9UM73 1620 aa27.96■■■□□ 2.07
LINC01550-201ENST00000499006 RALGAPBQ86X10 1494 aa27.95■■■□□ 2.06
LINC01550-201ENST00000499006 C14orf93Q9H972 538 aaKnown RBP27.93■■■□□ 2.06
LINC01550-201ENST00000499006 NCKAP5LQ9HCH0 1330 aa27.92■■■□□ 2.06
LINC01550-201ENST00000499006 ADAMTS13Q76LX8 1427 aa27.92■■■□□ 2.06
LINC01550-201ENST00000499006 DIP2AQ14689 1571 aa27.91■■■□□ 2.06
LINC01550-201ENST00000499006 NPHP4O75161 1426 aaPredicted RBP27.9■■■□□ 2.06
LINC01550-201ENST00000499006 CFAP70Q5T0N1 1121 aa27.9■■■□□ 2.06
LINC01550-201ENST00000499006 AEBP2Q6ZN18 517 aaPredicted RBP27.89■■■□□ 2.06
LINC01550-201ENST00000499006 SENP3Q9H4L4 574 aaPredicted RBP27.89■■■□□ 2.05
LINC01550-201ENST00000499006 ADGRB1O14514 1584 aa27.89■■■□□ 2.05
LINC01550-201ENST00000499006 ASXL1Q8IXJ9 1541 aa27.87■■■□□ 2.05
LINC01550-201ENST00000499006 GPRASP1Q5JY77 1395 aa27.86■■■□□ 2.05
LINC01550-201ENST00000499006 NBPF1Q3BBV0 1214 aa27.86■■■□□ 2.05
LINC01550-201ENST00000499006 ROCK2O75116 1388 aaKnown RBP27.84■■■□□ 2.05
LINC01550-201ENST00000499006 BCANQ96GW7 911 aa27.83■■■□□ 2.05
LINC01550-201ENST00000499006 TBX22Q9Y458 520 aa27.83■■■□□ 2.04
LINC01550-201ENST00000499006 CHD2O14647 1828 aaKnown RBP27.81■■■□□ 2.04
LINC01550-201ENST00000499006 SLC26A8Q96RN1 970 aa27.81■■■□□ 2.04
LINC01550-201ENST00000499006 METP08581 1390 aa27.81■■■□□ 2.04
LINC01550-201ENST00000499006 TMEM132EQ6IEE7 984 aa27.77■■■□□ 2.04
LINC01550-201ENST00000499006 KNDC1Q76NI1 1749 aa27.77■■■□□ 2.04
LINC01550-201ENST00000499006 PIK3R4Q99570 1358 aa27.75■■■□□ 2.03
LINC01550-201ENST00000499006 CARD11Q9BXL7 1154 aa27.75■■■□□ 2.03
LINC01550-201ENST00000499006 YTHDC2Q9H6S0 1430 aaKnown RBP27.74■■■□□ 2.03
LINC01550-201ENST00000499006 ARHGEF28Q8N1W1 1705 aaKnown RBP27.74■■■□□ 2.03
LINC01550-201ENST00000499006 XRN1Q8IZH2 1706 aaKnown RBP27.74■■■□□ 2.03
LINC01550-201ENST00000499006 PTPRUQ92729 1446 aa27.73■■■□□ 2.03
LINC01550-201ENST00000499006 LRPPRCP42704 1394 aaKnown RBP27.71■■■□□ 2.03
LINC01550-201ENST00000499006 NWD1Q149M9 1564 aa27.7■■■□□ 2.02
LINC01550-201ENST00000499006 TECPR2O15040 1411 aa27.69■■■□□ 2.02
LINC01550-201ENST00000499006 DMRT2Q9Y5R5 561 aa27.69■■■□□ 2.02
LINC01550-201ENST00000499006 STRCP1A6NGW2 1772 aa27.69■■■□□ 2.02
LINC01550-201ENST00000499006 CPS1P31327 1500 aa27.68■■■□□ 2.02
LINC01550-201ENST00000499006 DLC1Q96QB1 1528 aa27.68■■■□□ 2.02
LINC01550-201ENST00000499006 ABCC11Q96J66 1382 aa27.68■■■□□ 2.02
LINC01550-201ENST00000499006 USP47Q96K76 1375 aa27.66■■■□□ 2.02
LINC01550-201ENST00000499006 TRAK1Q9UPV9 953 aa27.64■■■□□ 2.02
LINC01550-201ENST00000499006 STK26Q9P289 416 aa27.64■■■□□ 2.01
LINC01550-201ENST00000499006 AMOTL2Q9Y2J4 779 aa27.63■■■□□ 2.01
LINC01550-201ENST00000499006 PTCH1Q13635 1447 aa27.61■■■□□ 2.01
LINC01550-201ENST00000499006 EIF4G2P78344 907 aaKnown RBP eCLIP27.61■■■□□ 2.01
LINC01550-201ENST00000499006 QRICH2Q9H0J4 1663 aa27.61■■■□□ 2.01
LINC01550-201ENST00000499006 EIF3AQ14152 1382 aaKnown RBP27.61■■■□□ 2.01
LINC01550-201ENST00000499006 KCNA6P17658 529 aa27.6■■■□□ 2.01
LINC01550-201ENST00000499006 SIRT1Q96EB6 747 aa27.59■■■□□ 2.01
LINC01550-201ENST00000499006 FAM135BQ49AJ0 1406 aa27.59■■■□□ 2.01
LINC01550-201ENST00000499006 ROBO2Q9HCK4 1378 aa27.58■■■□□ 2.01
LINC01550-201ENST00000499006 HSPA5P11021 654 aaKnown RBP27.57■■■□□ 2
LINC01550-201ENST00000499006 NKTRP30414 1462 aaKnown RBP27.56■■■□□ 2
LINC01550-201ENST00000499006 ST20-MTHFSA0A0A6YYL1 179 aa27.55■■■□□ 2
LINC01550-201ENST00000499006 PRAM1Q96QH2 718 aa27.53■■■□□ 2
LINC01550-201ENST00000499006 PLEKHH1Q9ULM0 1364 aa27.52■■■□□ 2
LINC01550-201ENST00000499006 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.52■■■□□ 2
LINC01550-201ENST00000499006 CENPJQ9HC77 1338 aaPredicted RBP27.52■■■□□ 2
LINC01550-201ENST00000499006 WAPLQ7Z5K2 1190 aa27.51■■■□□ 2
LINC01550-201ENST00000499006 XIRP1Q702N8 1843 aaKnown RBP27.51■■□□□ 1.99
LINC01550-201ENST00000499006 ZNF335Q9H4Z2 1342 aaPredicted RBP27.51■■□□□ 1.99
LINC01550-201ENST00000499006 SBNO2Q9Y2G9 1366 aa27.5■■□□□ 1.99
LINC01550-201ENST00000499006 TESK2Q96S53 571 aa27.5■■□□□ 1.99
LINC01550-201ENST00000499006 HIRIP3Q9BW71 556 aaPredicted RBP27.5■■□□□ 1.99
LINC01550-201ENST00000499006 POGKQ9P215 609 aa27.48■■□□□ 1.99
LINC01550-201ENST00000499006 NALCNQ8IZF0 1738 aa27.47■■□□□ 1.99
LINC01550-201ENST00000499006 ADGRB2O60241 1585 aa27.45■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms