RNA–Protein interactions for RNA: ENST00000498793.5

SCMH1-217, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-217ENST00000498793 RIMS2Q9UQ26 1411 aa17.42■□□□□ 0.38
SCMH1-217ENST00000498793 SLC4A1APQ9BWU0 796 aaKnown RBP17.4■□□□□ 0.38
SCMH1-217ENST00000498793 SLC52A1Q9NWF4 448 aa17.4■□□□□ 0.38
SCMH1-217ENST00000498793 NRXN3Q9Y4C0 1643 aa17.39■□□□□ 0.38
SCMH1-217ENST00000498793 NEXMIFQ5QGS0 1516 aa17.37■□□□□ 0.37
SCMH1-217ENST00000498793 PPLO60437 1756 aa17.36■□□□□ 0.37
SCMH1-217ENST00000498793 CHD2O14647 1828 aaKnown RBP17.35■□□□□ 0.37
SCMH1-217ENST00000498793 FBXO41Q8TF61 875 aa17.35■□□□□ 0.37
SCMH1-217ENST00000498793 SLC26A8Q96RN1 970 aa17.35■□□□□ 0.37
SCMH1-217ENST00000498793 ALKQ9UM73 1620 aa17.35■□□□□ 0.37
SCMH1-217ENST00000498793 EID1Q9Y6B2 187 aa17.34■□□□□ 0.37
SCMH1-217ENST00000498793 IFT172Q9UG01 1749 aa17.33■□□□□ 0.37
SCMH1-217ENST00000498793 CPS1P31327 1500 aa17.33■□□□□ 0.37
SCMH1-217ENST00000498793 MPHOSPH9Q99550 1183 aa17.33■□□□□ 0.36
SCMH1-217ENST00000498793 NWD1Q149M9 1564 aa17.32■□□□□ 0.36
SCMH1-217ENST00000498793 LRRC7Q96NW7 1537 aa17.32■□□□□ 0.36
SCMH1-217ENST00000498793 SETD1AO15047 1707 aaKnown RBP17.32■□□□□ 0.36
SCMH1-217ENST00000498793 ADAMTS13Q76LX8 1427 aa17.31■□□□□ 0.36
SCMH1-217ENST00000498793 PLEKHG1Q9ULL1 1385 aa17.31■□□□□ 0.36
SCMH1-217ENST00000498793 PPP1R15AO75807 674 aaPredicted RBP17.3■□□□□ 0.36
SCMH1-217ENST00000498793 RBM33Q96EV2 1170 aaKnown RBP17.29■□□□□ 0.36
SCMH1-217ENST00000498793 BCANQ96GW7 911 aa17.29■□□□□ 0.36
SCMH1-217ENST00000498793 ZNF326Q5BKZ1 582 aaKnown RBP17.28■□□□□ 0.36
SCMH1-217ENST00000498793 IQSEC2Q5JU85 1478 aa17.28■□□□□ 0.36
SCMH1-217ENST00000498793 SETBP1Q9Y6X0 1596 aa17.27■□□□□ 0.35
SCMH1-217ENST00000498793 DIP2AQ14689 1571 aa17.25■□□□□ 0.35
SCMH1-217ENST00000498793 PTPRUQ92729 1446 aa17.25■□□□□ 0.35
SCMH1-217ENST00000498793 XRN1Q8IZH2 1706 aaKnown RBP17.24■□□□□ 0.35
SCMH1-217ENST00000498793 CCDC144AA2RUR9 1427 aa17.24■□□□□ 0.35
SCMH1-217ENST00000498793 SPATA31E1Q6ZUB1 1445 aa17.24■□□□□ 0.35
SCMH1-217ENST00000498793 UBAP1LF5GYI3 381 aa17.22■□□□□ 0.35
SCMH1-217ENST00000498793 TMEM94Q12767 1356 aa17.2■□□□□ 0.34
SCMH1-217ENST00000498793 RGL3Q3MIN7 710 aa17.2■□□□□ 0.34
SCMH1-217ENST00000498793 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCMH1-217ENST00000498793 NKTRP30414 1462 aaKnown RBP17.19■□□□□ 0.34
SCMH1-217ENST00000498793 METP08581 1390 aa17.19■□□□□ 0.34
SCMH1-217ENST00000498793 ASXL1Q8IXJ9 1541 aa17.18■□□□□ 0.34
SCMH1-217ENST00000498793 KCNA6P17658 529 aa17.18■□□□□ 0.34
SCMH1-217ENST00000498793 ANKRD30BQ9BXX2 1392 aa17.17■□□□□ 0.34
SCMH1-217ENST00000498793 PIP4K2BP78356 416 aa17.17■□□□□ 0.34
SCMH1-217ENST00000498793 ADGRF5Q8IZF2 1346 aa17.17■□□□□ 0.34
SCMH1-217ENST00000498793 NALCNQ8IZF0 1738 aa17.16■□□□□ 0.34
SCMH1-217ENST00000498793 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
SCMH1-217ENST00000498793 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.16■□□□□ 0.34
SCMH1-217ENST00000498793 TBX22Q9Y458 520 aa17.15■□□□□ 0.34
SCMH1-217ENST00000498793 PROSER2Q86WR7 435 aaPredicted RBP17.14■□□□□ 0.33
SCMH1-217ENST00000498793 HDGFP51858 240 aaKnown RBP17.13■□□□□ 0.33
SCMH1-217ENST00000498793 ROBO1Q9Y6N7 1651 aa17.11■□□□□ 0.33
SCMH1-217ENST00000498793 AMOTL2Q9Y2J4 779 aa17.1■□□□□ 0.33
SCMH1-217ENST00000498793 PIK3C2GO75747 1445 aa17.09■□□□□ 0.33
SCMH1-217ENST00000498793 PIK3R4Q99570 1358 aa17.08■□□□□ 0.32
SCMH1-217ENST00000498793 HRCP23327 699 aa17.08■□□□□ 0.32
SCMH1-217ENST00000498793 KNDC1Q76NI1 1749 aa17.07■□□□□ 0.32
SCMH1-217ENST00000498793 MYOM2P54296 1465 aa17.07■□□□□ 0.32
SCMH1-217ENST00000498793 RPGRIP1LQ68CZ1 1315 aa17.07■□□□□ 0.32
SCMH1-217ENST00000498793 HSPA1LP34931 641 aa17.07■□□□□ 0.32
SCMH1-217ENST00000498793 NRXN1Q9ULB1 1477 aa17.06■□□□□ 0.32
SCMH1-217ENST00000498793 ROBO2Q9HCK4 1378 aa17.06■□□□□ 0.32
SCMH1-217ENST00000498793 VGFO15240 615 aaPredicted RBP17.05■□□□□ 0.32
SCMH1-217ENST00000498793 TOM1O60784 492 aa17.05■□□□□ 0.32
SCMH1-217ENST00000498793 DHX57Q6P158 1386 aaKnown RBP17.04■□□□□ 0.32
SCMH1-217ENST00000498793 LAMC1P11047 1609 aa17.04■□□□□ 0.32
SCMH1-217ENST00000498793 MSH6P52701 1360 aa17.03■□□□□ 0.32
SCMH1-217ENST00000498793 TMEM132EQ6IEE7 984 aa17.03■□□□□ 0.32
SCMH1-217ENST00000498793 ACIN1Q9UKV3 1341 aaKnown RBP17.02■□□□□ 0.32
SCMH1-217ENST00000498793 TRIM26Q12899 539 aaPredicted RBP17.02■□□□□ 0.32
SCMH1-217ENST00000498793 C14orf37Q86TY3 774 aa17.02■□□□□ 0.32
SCMH1-217ENST00000498793 PHLPP1O60346 1717 aa17.01■□□□□ 0.31
SCMH1-217ENST00000498793 STK26Q9P289 416 aa17.01■□□□□ 0.31
SCMH1-217ENST00000498793 KDM2AQ9Y2K7 1162 aa17.01■□□□□ 0.31
SCMH1-217ENST00000498793 PTCH1Q13635 1447 aa17.01■□□□□ 0.31
SCMH1-217ENST00000498793 PLEKHH1Q9ULM0 1364 aa17.01■□□□□ 0.31
SCMH1-217ENST00000498793 CFAP70Q5T0N1 1121 aa17■□□□□ 0.31
SCMH1-217ENST00000498793 ADGRB1O14514 1584 aa16.99■□□□□ 0.31
SCMH1-217ENST00000498793 ADGRL3Q9HAR2 1447 aa16.99■□□□□ 0.31
SCMH1-217ENST00000498793 SIN3AQ96ST3 1273 aa16.99■□□□□ 0.31
SCMH1-217ENST00000498793 RGPD8O14715 1765 aaPredicted RBP16.99■□□□□ 0.31
SCMH1-217ENST00000498793 PRAG1Q86YV5 1406 aa16.97■□□□□ 0.31
SCMH1-217ENST00000498793 YTHDC2Q9H6S0 1430 aaKnown RBP16.97■□□□□ 0.31
SCMH1-217ENST00000498793 DCAF11Q8TEB1 546 aa16.97■□□□□ 0.31
SCMH1-217ENST00000498793 ARHGEF28Q8N1W1 1705 aaKnown RBP16.96■□□□□ 0.31
SCMH1-217ENST00000498793 LRPPRCP42704 1394 aaKnown RBP16.96■□□□□ 0.31
SCMH1-217ENST00000498793 COL16A1Q07092 1604 aaPredicted RBP16.96■□□□□ 0.3
SCMH1-217ENST00000498793 MST1RQ04912 1400 aa16.96■□□□□ 0.3
SCMH1-217ENST00000498793 MED1Q15648 1581 aaPredicted RBP16.95■□□□□ 0.3
SCMH1-217ENST00000498793 WAPLQ7Z5K2 1190 aa16.95■□□□□ 0.3
SCMH1-217ENST00000498793 TECPR2O15040 1411 aa16.95■□□□□ 0.3
SCMH1-217ENST00000498793 NCOA3Q9Y6Q9 1424 aa16.95■□□□□ 0.3
SCMH1-217ENST00000498793 C14orf93Q9H972 538 aaKnown RBP16.94■□□□□ 0.3
SCMH1-217ENST00000498793 NHSL1Q5SYE7 1610 aa16.94■□□□□ 0.3
SCMH1-217ENST00000498793 FAM135BQ49AJ0 1406 aa16.94■□□□□ 0.3
SCMH1-217ENST00000498793 FMN2Q9NZ56 1722 aa16.93■□□□□ 0.3
SCMH1-217ENST00000498793 SLAIN2Q9P270 581 aa16.93■□□□□ 0.3
SCMH1-217ENST00000498793 C19orf44Q9H6X5 657 aa16.92■□□□□ 0.3
SCMH1-217ENST00000498793 CDC42BPGQ6DT37 1551 aa16.92■□□□□ 0.3
SCMH1-217ENST00000498793 KIAA1210Q9ULL0 1709 aa16.91■□□□□ 0.3
SCMH1-217ENST00000498793 DCCP43146 1447 aa16.91■□□□□ 0.3
SCMH1-217ENST00000498793 NEUROD1Q13562 356 aa16.91■□□□□ 0.3
SCMH1-217ENST00000498793 DDX17Q92841 729 aaKnown RBP16.91■□□□□ 0.3
SCMH1-217ENST00000498793 AHDC1Q5TGY3 1603 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms