RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-211ENST00000498562 SLC26A8Q96RN1 970 aa39.78■■■■□ 3.96
CUL4A-211ENST00000498562 KCNA6P17658 529 aa39.75■■■■□ 3.95
CUL4A-211ENST00000498562 TMEM94Q12767 1356 aa39.73■■■■□ 3.95
CUL4A-211ENST00000498562 NKTRP30414 1462 aaKnown RBP39.72■■■■□ 3.95
CUL4A-211ENST00000498562 RIMS2Q9UQ26 1411 aa39.72■■■■□ 3.95
CUL4A-211ENST00000498562 PPARGC1BQ86YN6 1023 aaKnown RBP39.71■■■■□ 3.95
CUL4A-211ENST00000498562 PLEKHG1Q9ULL1 1385 aa39.71■■■■□ 3.95
CUL4A-211ENST00000498562 ITGAEP38570 1179 aa39.68■■■■□ 3.94
CUL4A-211ENST00000498562 SENP3Q9H4L4 574 aaPredicted RBP39.68■■■■□ 3.94
CUL4A-211ENST00000498562 NUP155O75694 1391 aa39.65■■■■□ 3.94
CUL4A-211ENST00000498562 CHD2O14647 1828 aaKnown RBP39.64■■■■□ 3.94
CUL4A-211ENST00000498562 BCANQ96GW7 911 aa39.63■■■■□ 3.93
CUL4A-211ENST00000498562 PROSER2Q86WR7 435 aaPredicted RBP39.62■■■■□ 3.93
CUL4A-211ENST00000498562 FAM135BQ49AJ0 1406 aa39.6■■■■□ 3.93
CUL4A-211ENST00000498562 PPP1R15AO75807 674 aaPredicted RBP39.6■■■■□ 3.93
CUL4A-211ENST00000498562 HDGFP51858 240 aaKnown RBP39.59■■■■□ 3.93
CUL4A-211ENST00000498562 CHGAP10645 457 aaKnown RBP39.58■■■■□ 3.93
CUL4A-211ENST00000498562 RBM33Q96EV2 1170 aaKnown RBP39.58■■■■□ 3.93
CUL4A-211ENST00000498562 ROBO1Q9Y6N7 1651 aa39.55■■■■□ 3.92
CUL4A-211ENST00000498562 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.54■■■■□ 3.92
CUL4A-211ENST00000498562 RRBP1Q9P2E9 1410 aaKnown RBP39.53■■■■□ 3.92
CUL4A-211ENST00000498562 SPHKAPQ2M3C7 1700 aa39.53■■■■□ 3.92
CUL4A-211ENST00000498562 DIP2AQ14689 1571 aa39.52■■■■□ 3.92
CUL4A-211ENST00000498562 ADAMTS13Q76LX8 1427 aa39.51■■■■□ 3.92
CUL4A-211ENST00000498562 TBX22Q9Y458 520 aa39.5■■■■□ 3.91
CUL4A-211ENST00000498562 MSH6P52701 1360 aa39.48■■■■□ 3.91
CUL4A-211ENST00000498562 PHF23Q9BUL5 403 aaPredicted RBP39.48■■■■□ 3.91
CUL4A-211ENST00000498562 NUTM2DQ5VT03 806 aaPredicted RBP39.47■■■■□ 3.91
CUL4A-211ENST00000498562 PIK3R4Q99570 1358 aa39.4■■■■□ 3.9
CUL4A-211ENST00000498562 TRPM2O94759 1503 aa39.39■■■■□ 3.9
CUL4A-211ENST00000498562 NCOA3Q9Y6Q9 1424 aa39.39■■■■□ 3.9
CUL4A-211ENST00000498562 NAIPQ13075 1403 aa39.38■■■■□ 3.89
CUL4A-211ENST00000498562 NRXN3Q9Y4C0 1643 aa39.36■■■■□ 3.89
CUL4A-211ENST00000498562 CLTCL1P53675 1640 aa39.33■■■■□ 3.89
CUL4A-211ENST00000498562 SLAIN2Q9P270 581 aa39.32■■■■□ 3.89
CUL4A-211ENST00000498562 SETBP1Q9Y6X0 1596 aa39.32■■■■□ 3.88
CUL4A-211ENST00000498562 PHLPP1O60346 1717 aa39.31■■■■□ 3.88
CUL4A-211ENST00000498562 PTPRUQ92729 1446 aa39.31■■■■□ 3.88
CUL4A-211ENST00000498562 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.29■■■■□ 3.88
CUL4A-211ENST00000498562 XRN1Q8IZH2 1706 aaKnown RBP39.26■■■■□ 3.87
CUL4A-211ENST00000498562 RGS17Q9UGC6 210 aaPredicted RBP39.24■■■■□ 3.87
CUL4A-211ENST00000498562 NEXMIFQ5QGS0 1516 aa39.24■■■■□ 3.87
CUL4A-211ENST00000498562 HFM1A2PYH4 1435 aa39.23■■■■□ 3.87
CUL4A-211ENST00000498562 ZNF326Q5BKZ1 582 aaKnown RBP39.22■■■■□ 3.87
CUL4A-211ENST00000498562 C14orf37Q86TY3 774 aa39.22■■■■□ 3.87
CUL4A-211ENST00000498562 AMOTL2Q9Y2J4 779 aa39.22■■■■□ 3.87
CUL4A-211ENST00000498562 KIF1BO60333 1816 aa39.21■■■■□ 3.87
CUL4A-211ENST00000498562 COL16A1Q07092 1604 aaPredicted RBP39.21■■■■□ 3.87
CUL4A-211ENST00000498562 C19orf44Q9H6X5 657 aa39.18■■■■□ 3.86
CUL4A-211ENST00000498562 CADPS2Q86UW7 1296 aa39.16■■■■□ 3.86
CUL4A-211ENST00000498562 JCADQ9P266 1359 aa39.13■■■■□ 3.85
CUL4A-211ENST00000498562 AHDC1Q5TGY3 1603 aaPredicted RBP39.13■■■■□ 3.85
CUL4A-211ENST00000498562 METP08581 1390 aa39.12■■■■□ 3.85
CUL4A-211ENST00000498562 ATF3P18847 181 aa39.11■■■■□ 3.85
CUL4A-211ENST00000498562 DCCP43146 1447 aa39.1■■■■□ 3.85
CUL4A-211ENST00000498562 TRIM52Q96A61 297 aa39.08■■■■□ 3.85
CUL4A-211ENST00000498562 SETD1AO15047 1707 aaKnown RBP39.03■■■■□ 3.84
CUL4A-211ENST00000498562 POTEAQ6S8J7 498 aa39.01■■■■□ 3.84
CUL4A-211ENST00000498562 SHPRHQ149N8 1683 aa39■■■■□ 3.83
CUL4A-211ENST00000498562 SLC4A1APQ9BWU0 796 aaKnown RBP39■■■■□ 3.83
CUL4A-211ENST00000498562 NALCNQ8IZF0 1738 aa38.99■■■■□ 3.83
CUL4A-211ENST00000498562 BRINP3Q76B58 766 aa38.98■■■■□ 3.83
CUL4A-211ENST00000498562 MST1RQ04912 1400 aa38.97■■■■□ 3.83
CUL4A-211ENST00000498562 ADGRL3Q9HAR2 1447 aa38.97■■■■□ 3.83
CUL4A-211ENST00000498562 LRP6O75581 1613 aa38.96■■■■□ 3.83
CUL4A-211ENST00000498562 ASXL1Q8IXJ9 1541 aa38.96■■■■□ 3.83
CUL4A-211ENST00000498562 PPLO60437 1756 aa38.95■■■■□ 3.83
CUL4A-211ENST00000498562 SPATA31A6Q5VVP1 1343 aa38.93■■■■□ 3.82
CUL4A-211ENST00000498562 NHSL1Q5SYE7 1610 aa38.92■■■■□ 3.82
CUL4A-211ENST00000498562 VGFO15240 615 aaPredicted RBP38.91■■■■□ 3.82
CUL4A-211ENST00000498562 RPGRIP1LQ68CZ1 1315 aa38.89■■■■□ 3.82
CUL4A-211ENST00000498562 PTCH1Q13635 1447 aa38.89■■■■□ 3.82
CUL4A-211ENST00000498562 PRAG1Q86YV5 1406 aa38.85■■■■□ 3.81
CUL4A-211ENST00000498562 FOXD1Q16676 465 aa38.83■■■■□ 3.81
CUL4A-211ENST00000498562 SETD5Q9C0A6 1442 aa38.81■■■■□ 3.8
CUL4A-211ENST00000498562 ROBO2Q9HCK4 1378 aa38.81■■■■□ 3.8
CUL4A-211ENST00000498562 CCDC144AA2RUR9 1427 aa38.77■■■■□ 3.8
CUL4A-211ENST00000498562 MEX3CQ5U5Q3 659 aaKnown RBP38.76■■■■□ 3.8
CUL4A-211ENST00000498562 IFT172Q9UG01 1749 aa38.75■■■■□ 3.79
CUL4A-211ENST00000498562 C1orf167Q5SNV9 1468 aa38.74■■■■□ 3.79
CUL4A-211ENST00000498562 SPATA31E1Q6ZUB1 1445 aa38.72■■■■□ 3.79
CUL4A-211ENST00000498562 LAMC1P11047 1609 aa38.71■■■■□ 3.79
CUL4A-211ENST00000498562 MPHOSPH9Q99550 1183 aa38.71■■■■□ 3.79
CUL4A-211ENST00000498562 DDX17Q92841 729 aaKnown RBP38.69■■■■□ 3.78
CUL4A-211ENST00000498562 ADGRF5Q8IZF2 1346 aa38.67■■■■□ 3.78
CUL4A-211ENST00000498562 ZNF772Q68DY9 489 aaPredicted RBP38.67■■■■□ 3.78
CUL4A-211ENST00000498562 LRRC59Q96AG4 307 aaKnown RBP38.67■■■■□ 3.78
CUL4A-211ENST00000498562 NUTM2BA6NNL0 878 aaPredicted RBP38.65■■■■□ 3.78
CUL4A-211ENST00000498562 NUTM2EB1AL46 878 aaPredicted RBP38.65■■■■□ 3.78
CUL4A-211ENST00000498562 NUTM2AQ8IVF1 878 aaPredicted RBP38.65■■■■□ 3.78
CUL4A-211ENST00000498562 PNPLA6Q8IY17 1366 aa38.64■■■■□ 3.78
CUL4A-211ENST00000498562 RGL3Q3MIN7 710 aa38.62■■■■□ 3.77
CUL4A-211ENST00000498562 ANKRD30BQ9BXX2 1392 aa38.61■■■■□ 3.77
CUL4A-211ENST00000498562 CDC42BPGQ6DT37 1551 aa38.61■■■■□ 3.77
CUL4A-211ENST00000498562 ORAI2Q96SN7 254 aa38.58■■■■□ 3.77
CUL4A-211ENST00000498562 KNDC1Q76NI1 1749 aa38.58■■■■□ 3.77
CUL4A-211ENST00000498562 TECPR2O15040 1411 aa38.57■■■■□ 3.77
CUL4A-211ENST00000498562 PIK3C2GO75747 1445 aa38.56■■■■□ 3.76
CUL4A-211ENST00000498562 AFF2P51816 1311 aa38.53■■■■□ 3.76
CUL4A-211ENST00000498562 SOS2Q07890 1332 aaPredicted RBP38.53■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms