RNA–Protein interactions for RNA: ENST00000498532.5

HDAC11-220, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-220ENST00000498532 MED1Q15648 1581 aaPredicted RBP26.55■■□□□ 1.84
HDAC11-220ENST00000498532 BCANQ96GW7 911 aa26.54■■□□□ 1.84
HDAC11-220ENST00000498532 NUP155O75694 1391 aa26.54■■□□□ 1.84
HDAC11-220ENST00000498532 RIMS2Q9UQ26 1411 aa26.53■■□□□ 1.84
HDAC11-220ENST00000498532 NWD1Q149M9 1564 aa26.53■■□□□ 1.84
HDAC11-220ENST00000498532 KCNA6P17658 529 aa26.52■■□□□ 1.84
HDAC11-220ENST00000498532 NKTRP30414 1462 aaKnown RBP26.51■■□□□ 1.83
HDAC11-220ENST00000498532 TMEM94Q12767 1356 aa26.51■■□□□ 1.83
HDAC11-220ENST00000498532 PLEKHG1Q9ULL1 1385 aa26.51■■□□□ 1.83
HDAC11-220ENST00000498532 PPP1R15AO75807 674 aaPredicted RBP26.51■■□□□ 1.83
HDAC11-220ENST00000498532 SOCS7O14512 581 aa26.5■■□□□ 1.83
HDAC11-220ENST00000498532 HDGFP51858 240 aaKnown RBP26.49■■□□□ 1.83
HDAC11-220ENST00000498532 SENP3Q9H4L4 574 aaPredicted RBP26.49■■□□□ 1.83
HDAC11-220ENST00000498532 CHGAP10645 457 aaKnown RBP26.48■■□□□ 1.83
HDAC11-220ENST00000498532 RRBP1Q9P2E9 1410 aaKnown RBP26.47■■□□□ 1.83
HDAC11-220ENST00000498532 PROSER2Q86WR7 435 aaPredicted RBP26.45■■□□□ 1.82
HDAC11-220ENST00000498532 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.44■■□□□ 1.82
HDAC11-220ENST00000498532 SPHKAPQ2M3C7 1700 aa26.42■■□□□ 1.82
HDAC11-220ENST00000498532 CHD2O14647 1828 aaKnown RBP26.42■■□□□ 1.82
HDAC11-220ENST00000498532 RBM33Q96EV2 1170 aaKnown RBP26.4■■□□□ 1.82
HDAC11-220ENST00000498532 DIP2AQ14689 1571 aa26.4■■□□□ 1.82
HDAC11-220ENST00000498532 FAM135BQ49AJ0 1406 aa26.39■■□□□ 1.81
HDAC11-220ENST00000498532 MSH6P52701 1360 aa26.37■■□□□ 1.81
HDAC11-220ENST00000498532 NUTM2DQ5VT03 806 aaPredicted RBP26.37■■□□□ 1.81
HDAC11-220ENST00000498532 ROBO1Q9Y6N7 1651 aa26.37■■□□□ 1.81
HDAC11-220ENST00000498532 TBX22Q9Y458 520 aa26.36■■□□□ 1.81
HDAC11-220ENST00000498532 ADAMTS13Q76LX8 1427 aa26.36■■□□□ 1.81
HDAC11-220ENST00000498532 NAIPQ13075 1403 aa26.35■■□□□ 1.81
HDAC11-220ENST00000498532 PHF23Q9BUL5 403 aaPredicted RBP26.35■■□□□ 1.81
HDAC11-220ENST00000498532 TRPM2O94759 1503 aa26.31■■□□□ 1.8
HDAC11-220ENST00000498532 PIK3R4Q99570 1358 aa26.31■■□□□ 1.8
HDAC11-220ENST00000498532 CLTCL1P53675 1640 aa26.28■■□□□ 1.8
HDAC11-220ENST00000498532 HFM1A2PYH4 1435 aa26.27■■□□□ 1.8
HDAC11-220ENST00000498532 NCOA3Q9Y6Q9 1424 aa26.27■■□□□ 1.8
HDAC11-220ENST00000498532 ZNF326Q5BKZ1 582 aaKnown RBP26.26■■□□□ 1.79
HDAC11-220ENST00000498532 NRXN3Q9Y4C0 1643 aa26.25■■□□□ 1.79
HDAC11-220ENST00000498532 SETBP1Q9Y6X0 1596 aa26.25■■□□□ 1.79
HDAC11-220ENST00000498532 C14orf37Q86TY3 774 aa26.25■■□□□ 1.79
HDAC11-220ENST00000498532 SLAIN2Q9P270 581 aa26.24■■□□□ 1.79
HDAC11-220ENST00000498532 KIF1BO60333 1816 aa26.22■■□□□ 1.79
HDAC11-220ENST00000498532 PHLPP1O60346 1717 aa26.21■■□□□ 1.79
HDAC11-220ENST00000498532 NEXMIFQ5QGS0 1516 aa26.2■■□□□ 1.79
HDAC11-220ENST00000498532 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.2■■□□□ 1.79
HDAC11-220ENST00000498532 PTPRUQ92729 1446 aa26.2■■□□□ 1.78
HDAC11-220ENST00000498532 XRN1Q8IZH2 1706 aaKnown RBP26.19■■□□□ 1.78
HDAC11-220ENST00000498532 TRIM52Q96A61 297 aa26.19■■□□□ 1.78
HDAC11-220ENST00000498532 AMOTL2Q9Y2J4 779 aa26.19■■□□□ 1.78
HDAC11-220ENST00000498532 CADPS2Q86UW7 1296 aa26.16■■□□□ 1.78
HDAC11-220ENST00000498532 C19orf44Q9H6X5 657 aa26.16■■□□□ 1.78
HDAC11-220ENST00000498532 ATF3P18847 181 aa26.14■■□□□ 1.78
HDAC11-220ENST00000498532 SLC4A1APQ9BWU0 796 aaKnown RBP26.12■■□□□ 1.77
HDAC11-220ENST00000498532 COL16A1Q07092 1604 aaPredicted RBP26.12■■□□□ 1.77
HDAC11-220ENST00000498532 METP08581 1390 aa26.11■■□□□ 1.77
HDAC11-220ENST00000498532 DCCP43146 1447 aa26.11■■□□□ 1.77
HDAC11-220ENST00000498532 JCADQ9P266 1359 aa26.09■■□□□ 1.77
HDAC11-220ENST00000498532 AHDC1Q5TGY3 1603 aaPredicted RBP26.08■■□□□ 1.77
HDAC11-220ENST00000498532 RGS17Q9UGC6 210 aaPredicted RBP26.08■■□□□ 1.77
HDAC11-220ENST00000498532 VGFO15240 615 aaPredicted RBP26.03■■□□□ 1.76
HDAC11-220ENST00000498532 SETD1AO15047 1707 aaKnown RBP26.02■■□□□ 1.76
HDAC11-220ENST00000498532 PPLO60437 1756 aa26.02■■□□□ 1.76
HDAC11-220ENST00000498532 ADGRL3Q9HAR2 1447 aa26.02■■□□□ 1.76
HDAC11-220ENST00000498532 NALCNQ8IZF0 1738 aa26.02■■□□□ 1.76
HDAC11-220ENST00000498532 RPGRIP1LQ68CZ1 1315 aa26.01■■□□□ 1.75
HDAC11-220ENST00000498532 ASXL1Q8IXJ9 1541 aa26■■□□□ 1.75
HDAC11-220ENST00000498532 MST1RQ04912 1400 aa26■■□□□ 1.75
HDAC11-220ENST00000498532 BRINP3Q76B58 766 aa26■■□□□ 1.75
HDAC11-220ENST00000498532 SHPRHQ149N8 1683 aa25.99■■□□□ 1.75
HDAC11-220ENST00000498532 PTCH1Q13635 1447 aa25.98■■□□□ 1.75
HDAC11-220ENST00000498532 FOXD1Q16676 465 aa25.98■■□□□ 1.75
HDAC11-220ENST00000498532 CCDC144AA2RUR9 1427 aa25.97■■□□□ 1.75
HDAC11-220ENST00000498532 SPATA31A6Q5VVP1 1343 aa25.96■■□□□ 1.75
HDAC11-220ENST00000498532 LRP6O75581 1613 aa25.95■■□□□ 1.74
HDAC11-220ENST00000498532 NHSL1Q5SYE7 1610 aa25.95■■□□□ 1.74
HDAC11-220ENST00000498532 POTEAQ6S8J7 498 aa25.94■■□□□ 1.74
HDAC11-220ENST00000498532 PRAG1Q86YV5 1406 aa25.93■■□□□ 1.74
HDAC11-220ENST00000498532 ROBO2Q9HCK4 1378 aa25.92■■□□□ 1.74
HDAC11-220ENST00000498532 MPHOSPH9Q99550 1183 aa25.91■■□□□ 1.74
HDAC11-220ENST00000498532 MEX3CQ5U5Q3 659 aaKnown RBP25.9■■□□□ 1.74
HDAC11-220ENST00000498532 SPATA31E1Q6ZUB1 1445 aa25.88■■□□□ 1.73
HDAC11-220ENST00000498532 IFT172Q9UG01 1749 aa25.88■■□□□ 1.73
HDAC11-220ENST00000498532 SETD5Q9C0A6 1442 aa25.88■■□□□ 1.73
HDAC11-220ENST00000498532 C1orf167Q5SNV9 1468 aa25.85■■□□□ 1.73
HDAC11-220ENST00000498532 ACIN1Q9UKV3 1341 aaKnown RBP25.85■■□□□ 1.73
HDAC11-220ENST00000498532 ANKRD30BQ9BXX2 1392 aa25.84■■□□□ 1.73
HDAC11-220ENST00000498532 RGL3Q3MIN7 710 aa25.84■■□□□ 1.73
HDAC11-220ENST00000498532 ADGRF5Q8IZF2 1346 aa25.84■■□□□ 1.73
HDAC11-220ENST00000498532 NUTM2BA6NNL0 878 aaPredicted RBP25.81■■□□□ 1.72
HDAC11-220ENST00000498532 NUTM2EB1AL46 878 aaPredicted RBP25.81■■□□□ 1.72
HDAC11-220ENST00000498532 NUTM2AQ8IVF1 878 aaPredicted RBP25.81■■□□□ 1.72
HDAC11-220ENST00000498532 LRRC59Q96AG4 307 aaKnown RBP25.81■■□□□ 1.72
HDAC11-220ENST00000498532 DDX17Q92841 729 aaKnown RBP25.8■■□□□ 1.72
HDAC11-220ENST00000498532 LAMC1P11047 1609 aa25.8■■□□□ 1.72
HDAC11-220ENST00000498532 CDC42BPGQ6DT37 1551 aa25.79■■□□□ 1.72
HDAC11-220ENST00000498532 ZNF772Q68DY9 489 aaPredicted RBP25.79■■□□□ 1.72
HDAC11-220ENST00000498532 PIK3C2GO75747 1445 aa25.78■■□□□ 1.72
HDAC11-220ENST00000498532 PNPLA6Q8IY17 1366 aa25.76■■□□□ 1.71
HDAC11-220ENST00000498532 TECPR2O15040 1411 aa25.76■■□□□ 1.71
HDAC11-220ENST00000498532 KNDC1Q76NI1 1749 aa25.76■■□□□ 1.71
HDAC11-220ENST00000498532 RAB3GAP2Q9H2M9 1393 aa25.75■■□□□ 1.71
HDAC11-220ENST00000498532 LRPPRCP42704 1394 aaKnown RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms