RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 CFAP65Q6ZU64 1925 aaKnown RBP21.12■□□□□ 0.97
SHANK2-217ENST00000498519 TET3O43151 1660 aa21.12■□□□□ 0.97
SHANK2-217ENST00000498519 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.1■□□□□ 0.97
SHANK2-217ENST00000498519 PLEKHG1Q9ULL1 1385 aa21.09■□□□□ 0.97
SHANK2-217ENST00000498519 SLAIN2Q9P270 581 aa21.08■□□□□ 0.97
SHANK2-217ENST00000498519 RGS17Q9UGC6 210 aaPredicted RBP21.08■□□□□ 0.97
SHANK2-217ENST00000498519 TBX22Q9Y458 520 aa21.06■□□□□ 0.96
SHANK2-217ENST00000498519 NCOA3Q9Y6Q9 1424 aa21.05■□□□□ 0.96
SHANK2-217ENST00000498519 RIMS2Q9UQ26 1411 aa21.04■□□□□ 0.96
SHANK2-217ENST00000498519 RBM33Q96EV2 1170 aaKnown RBP21.04■□□□□ 0.96
SHANK2-217ENST00000498519 NWD1Q149M9 1564 aa21.04■□□□□ 0.96
SHANK2-217ENST00000498519 ZFYVE9O95405 1425 aa21.04■□□□□ 0.96
SHANK2-217ENST00000498519 CHGAP10645 457 aaKnown RBP21.02■□□□□ 0.96
SHANK2-217ENST00000498519 C14orf37Q86TY3 774 aa21.01■□□□□ 0.95
SHANK2-217ENST00000498519 XIRP1Q702N8 1843 aaKnown RBP21.01■□□□□ 0.95
SHANK2-217ENST00000498519 JCADQ9P266 1359 aa21■□□□□ 0.95
SHANK2-217ENST00000498519 ROCK1Q13464 1354 aa20.99■□□□□ 0.95
SHANK2-217ENST00000498519 PIK3R4Q99570 1358 aa20.99■□□□□ 0.95
SHANK2-217ENST00000498519 CADPS2Q86UW7 1296 aa20.99■□□□□ 0.95
SHANK2-217ENST00000498519 ROBO1Q9Y6N7 1651 aa20.99■□□□□ 0.95
SHANK2-217ENST00000498519 ATF3P18847 181 aa20.96■□□□□ 0.95
SHANK2-217ENST00000498519 POTEAQ6S8J7 498 aa20.96■□□□□ 0.95
SHANK2-217ENST00000498519 C19orf44Q9H6X5 657 aa20.96■□□□□ 0.95
SHANK2-217ENST00000498519 SPATA31A6Q5VVP1 1343 aa20.94■□□□□ 0.94
SHANK2-217ENST00000498519 TMEM131LA2VDJ0 1609 aa20.93■□□□□ 0.94
SHANK2-217ENST00000498519 NUP155O75694 1391 aa20.92■□□□□ 0.94
SHANK2-217ENST00000498519 DIP2AQ14689 1571 aa20.92■□□□□ 0.94
SHANK2-217ENST00000498519 UNC13BO14795 1591 aa20.91■□□□□ 0.94
SHANK2-217ENST00000498519 ADAMTS13Q76LX8 1427 aa20.9■□□□□ 0.94
SHANK2-217ENST00000498519 GCC2Q8IWJ2 1684 aa20.89■□□□□ 0.93
SHANK2-217ENST00000498519 MEX3CQ5U5Q3 659 aaKnown RBP20.88■□□□□ 0.93
SHANK2-217ENST00000498519 NUTM2DQ5VT03 806 aaPredicted RBP20.88■□□□□ 0.93
SHANK2-217ENST00000498519 ZNF772Q68DY9 489 aaPredicted RBP20.88■□□□□ 0.93
SHANK2-217ENST00000498519 AMOTL2Q9Y2J4 779 aa20.88■□□□□ 0.93
SHANK2-217ENST00000498519 CHD2O14647 1828 aaKnown RBP20.85■□□□□ 0.93
SHANK2-217ENST00000498519 TRPM2O94759 1503 aa20.85■□□□□ 0.93
SHANK2-217ENST00000498519 PHLPP1O60346 1717 aa20.85■□□□□ 0.93
SHANK2-217ENST00000498519 IQGAP3Q86VI3 1631 aa20.83■□□□□ 0.93
SHANK2-217ENST00000498519 DCCP43146 1447 aa20.83■□□□□ 0.93
SHANK2-217ENST00000498519 ITGAEP38570 1179 aa20.82■□□□□ 0.92
SHANK2-217ENST00000498519 ZNF326Q5BKZ1 582 aaKnown RBP20.82■□□□□ 0.92
SHANK2-217ENST00000498519 E9PCH4 1651 aa20.81■□□□□ 0.92
SHANK2-217ENST00000498519 COL16A1Q07092 1604 aaPredicted RBP20.8■□□□□ 0.92
SHANK2-217ENST00000498519 BRINP3Q76B58 766 aa20.8■□□□□ 0.92
SHANK2-217ENST00000498519 AHDC1Q5TGY3 1603 aaPredicted RBP20.79■□□□□ 0.92
SHANK2-217ENST00000498519 PTPRUQ92729 1446 aa20.76■□□□□ 0.91
SHANK2-217ENST00000498519 MYO5BQ9ULV0 1848 aa20.76■□□□□ 0.91
SHANK2-217ENST00000498519 RXRBP28702 533 aa20.75■□□□□ 0.91
SHANK2-217ENST00000498519 LRRC59Q96AG4 307 aaKnown RBP20.75■□□□□ 0.91
SHANK2-217ENST00000498519 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.74■□□□□ 0.91
SHANK2-217ENST00000498519 LRP6O75581 1613 aa20.74■□□□□ 0.91
SHANK2-217ENST00000498519 SETBP1Q9Y6X0 1596 aa20.73■□□□□ 0.91
SHANK2-217ENST00000498519 NUTM2BA6NNL0 878 aaPredicted RBP20.72■□□□□ 0.91
SHANK2-217ENST00000498519 NUTM2EB1AL46 878 aaPredicted RBP20.72■□□□□ 0.91
SHANK2-217ENST00000498519 NUTM2AQ8IVF1 878 aaPredicted RBP20.72■□□□□ 0.91
SHANK2-217ENST00000498519 SETD5Q9C0A6 1442 aa20.71■□□□□ 0.91
SHANK2-217ENST00000498519 TRIM52Q96A61 297 aa20.7■□□□□ 0.9
SHANK2-217ENST00000498519 METP08581 1390 aa20.7■□□□□ 0.9
SHANK2-217ENST00000498519 MST1RQ04912 1400 aa20.7■□□□□ 0.9
SHANK2-217ENST00000498519 ASXL1Q8IXJ9 1541 aa20.69■□□□□ 0.9
SHANK2-217ENST00000498519 VGFO15240 615 aaPredicted RBP20.69■□□□□ 0.9
SHANK2-217ENST00000498519 SHPRHQ149N8 1683 aa20.69■□□□□ 0.9
SHANK2-217ENST00000498519 ADGRL3Q9HAR2 1447 aa20.68■□□□□ 0.9
SHANK2-217ENST00000498519 UPF1Q92900 1129 aaKnown RBP eCLIP20.67■□□□□ 0.9
SHANK2-217ENST00000498519 CDK12Q9NYV4 1490 aaPredicted RBP20.67■□□□□ 0.9
SHANK2-217ENST00000498519 XRN1Q8IZH2 1706 aaKnown RBP20.65■□□□□ 0.9
SHANK2-217ENST00000498519 AFF2P51816 1311 aa20.65■□□□□ 0.9
SHANK2-217ENST00000498519 RPGRIP1LQ68CZ1 1315 aa20.64■□□□□ 0.89
SHANK2-217ENST00000498519 SPHKAPQ2M3C7 1700 aa20.63■□□□□ 0.89
SHANK2-217ENST00000498519 NRXN3Q9Y4C0 1643 aa20.63■□□□□ 0.89
SHANK2-217ENST00000498519 PPARGC1BQ86YN6 1023 aaKnown RBP20.62■□□□□ 0.89
SHANK2-217ENST00000498519 C8orf37Q96NL8 207 aa20.61■□□□□ 0.89
SHANK2-217ENST00000498519 PTCH1Q13635 1447 aa20.61■□□□□ 0.89
SHANK2-217ENST00000498519 NEXMIFQ5QGS0 1516 aa20.6■□□□□ 0.89
SHANK2-217ENST00000498519 RBM6P78332 1123 aaKnown RBP20.6■□□□□ 0.89
SHANK2-217ENST00000498519 QTRT2Q9H974 415 aaKnown RBP20.6■□□□□ 0.89
SHANK2-217ENST00000498519 PNPLA6Q8IY17 1366 aa20.59■□□□□ 0.89
SHANK2-217ENST00000498519 NGLY1Q96IV0 654 aa20.59■□□□□ 0.89
SHANK2-217ENST00000498519 RRBP1Q9P2E9 1410 aaKnown RBP20.59■□□□□ 0.89
SHANK2-217ENST00000498519 C1orf167Q5SNV9 1468 aa20.58■□□□□ 0.89
SHANK2-217ENST00000498519 NAIPQ13075 1403 aa20.58■□□□□ 0.88
SHANK2-217ENST00000498519 SETD1AO15047 1707 aaKnown RBP20.58■□□□□ 0.88
SHANK2-217ENST00000498519 SLC4A1APQ9BWU0 796 aaKnown RBP20.56■□□□□ 0.88
SHANK2-217ENST00000498519 NHSL1Q5SYE7 1610 aa20.56■□□□□ 0.88
SHANK2-217ENST00000498519 HFM1A2PYH4 1435 aa20.55■□□□□ 0.88
SHANK2-217ENST00000498519 DDX17Q92841 729 aaKnown RBP20.55■□□□□ 0.88
SHANK2-217ENST00000498519 CLTCL1P53675 1640 aa20.55■□□□□ 0.88
SHANK2-217ENST00000498519 SOS2Q07890 1332 aaPredicted RBP20.54■□□□□ 0.88
SHANK2-217ENST00000498519 PRAG1Q86YV5 1406 aa20.54■□□□□ 0.88
SHANK2-217ENST00000498519 ADAMTS2O95450 1211 aa20.53■□□□□ 0.88
SHANK2-217ENST00000498519 ROBO2Q9HCK4 1378 aa20.53■□□□□ 0.88
SHANK2-217ENST00000498519 FOXD1Q16676 465 aa20.51■□□□□ 0.87
SHANK2-217ENST00000498519 ORAI2Q96SN7 254 aa20.51■□□□□ 0.87
SHANK2-217ENST00000498519 TRPC5Q9UL62 973 aaPredicted RBP20.5■□□□□ 0.87
SHANK2-217ENST00000498519 NPHP3Q7Z494 1330 aa20.5■□□□□ 0.87
SHANK2-217ENST00000498519 USP21Q9UK80 565 aa20.49■□□□□ 0.87
SHANK2-217ENST00000498519 LRPPRCP42704 1394 aaKnown RBP20.47■□□□□ 0.87
SHANK2-217ENST00000498519 NALCNQ8IZF0 1738 aa20.47■□□□□ 0.87
SHANK2-217ENST00000498519 RGS12O14924 1447 aa20.47■□□□□ 0.87
SHANK2-217ENST00000498519 FNBP4Q8N3X1 1017 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms