RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 MYO5BQ9ULV0 1848 aa18.79■□□□□ 0.6
THBS3-209ENST00000498500 CHD2O14647 1828 aaKnown RBP18.78■□□□□ 0.6
THBS3-209ENST00000498500 ANKRD30AQ9BXX3 1397 aa18.78■□□□□ 0.6
THBS3-209ENST00000498500 JCADQ9P266 1359 aa18.78■□□□□ 0.6
THBS3-209ENST00000498500 SLC52A1Q9NWF4 448 aa18.77■□□□□ 0.6
THBS3-209ENST00000498500 NOS1P29475 1434 aa18.76■□□□□ 0.59
THBS3-209ENST00000498500 APLP2Q06481 763 aa18.76■□□□□ 0.59
THBS3-209ENST00000498500 PPP1R15AO75807 674 aaPredicted RBP18.73■□□□□ 0.59
THBS3-209ENST00000498500 GCC2Q8IWJ2 1684 aa18.73■□□□□ 0.59
THBS3-209ENST00000498500 HDGFP51858 240 aaKnown RBP18.72■□□□□ 0.59
THBS3-209ENST00000498500 FGD6Q6ZV73 1430 aa18.72■□□□□ 0.59
THBS3-209ENST00000498500 COL16A1Q07092 1604 aaPredicted RBP18.71■□□□□ 0.59
THBS3-209ENST00000498500 MEX3CQ5U5Q3 659 aaKnown RBP18.71■□□□□ 0.59
THBS3-209ENST00000498500 C14orf37Q86TY3 774 aa18.71■□□□□ 0.59
THBS3-209ENST00000498500 PLEKHG1Q9ULL1 1385 aa18.7■□□□□ 0.58
THBS3-209ENST00000498500 ZFYVE9O95405 1425 aa18.68■□□□□ 0.58
THBS3-209ENST00000498500 RIMS2Q9UQ26 1411 aa18.68■□□□□ 0.58
THBS3-209ENST00000498500 RPRD2Q5VT52 1461 aaKnown RBP18.68■□□□□ 0.58
THBS3-209ENST00000498500 SPATA31A6Q5VVP1 1343 aa18.68■□□□□ 0.58
THBS3-209ENST00000498500 ZNF772Q68DY9 489 aaPredicted RBP18.67■□□□□ 0.58
THBS3-209ENST00000498500 TMEM131LA2VDJ0 1609 aa18.67■□□□□ 0.58
THBS3-209ENST00000498500 TRIM52Q96A61 297 aa18.66■□□□□ 0.58
THBS3-209ENST00000498500 TBX22Q9Y458 520 aa18.66■□□□□ 0.58
THBS3-209ENST00000498500 LRP6O75581 1613 aa18.66■□□□□ 0.58
THBS3-209ENST00000498500 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.66■□□□□ 0.58
THBS3-209ENST00000498500 CHGAP10645 457 aaKnown RBP18.65■□□□□ 0.58
THBS3-209ENST00000498500 NCOA3Q9Y6Q9 1424 aa18.65■□□□□ 0.58
THBS3-209ENST00000498500 SHPRHQ149N8 1683 aa18.64■□□□□ 0.57
THBS3-209ENST00000498500 ATF3P18847 181 aa18.64■□□□□ 0.57
THBS3-209ENST00000498500 CADPS2Q86UW7 1296 aa18.64■□□□□ 0.57
THBS3-209ENST00000498500 ADGRL2O95490 1459 aa18.64■□□□□ 0.57
THBS3-209ENST00000498500 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.63■□□□□ 0.57
THBS3-209ENST00000498500 UPF1Q92900 1129 aaKnown RBP eCLIP18.63■□□□□ 0.57
THBS3-209ENST00000498500 ANKRD50Q9ULJ7 1429 aa18.63■□□□□ 0.57
THBS3-209ENST00000498500 NUTM2DQ5VT03 806 aaPredicted RBP18.62■□□□□ 0.57
THBS3-209ENST00000498500 C19orf44Q9H6X5 657 aa18.62■□□□□ 0.57
THBS3-209ENST00000498500 AHDC1Q5TGY3 1603 aaPredicted RBP18.62■□□□□ 0.57
THBS3-209ENST00000498500 FAM50AQ14320 339 aaKnown RBP18.61■□□□□ 0.57
THBS3-209ENST00000498500 RXRBP28702 533 aa18.59■□□□□ 0.57
THBS3-209ENST00000498500 DIP2AQ14689 1571 aa18.59■□□□□ 0.57
THBS3-209ENST00000498500 ADAMTS13Q76LX8 1427 aa18.58■□□□□ 0.57
THBS3-209ENST00000498500 NUTM2BA6NNL0 878 aaPredicted RBP18.58■□□□□ 0.56
THBS3-209ENST00000498500 NUTM2EB1AL46 878 aaPredicted RBP18.58■□□□□ 0.56
THBS3-209ENST00000498500 NUTM2AQ8IVF1 878 aaPredicted RBP18.58■□□□□ 0.56
THBS3-209ENST00000498500 E9PCH4 1651 aa18.57■□□□□ 0.56
THBS3-209ENST00000498500 PIK3R4Q99570 1358 aa18.56■□□□□ 0.56
THBS3-209ENST00000498500 TRPM2O94759 1503 aa18.55■□□□□ 0.56
THBS3-209ENST00000498500 AMOTL2Q9Y2J4 779 aa18.55■□□□□ 0.56
THBS3-209ENST00000498500 BRINP3Q76B58 766 aa18.54■□□□□ 0.56
THBS3-209ENST00000498500 UNC13BO14795 1591 aa18.54■□□□□ 0.56
THBS3-209ENST00000498500 AFF2P51816 1311 aa18.51■□□□□ 0.55
THBS3-209ENST00000498500 CDK12Q9NYV4 1490 aaPredicted RBP18.51■□□□□ 0.55
THBS3-209ENST00000498500 PTPRUQ92729 1446 aa18.49■□□□□ 0.55
THBS3-209ENST00000498500 NHSL1Q5SYE7 1610 aa18.49■□□□□ 0.55
THBS3-209ENST00000498500 IQGAP3Q86VI3 1631 aa18.49■□□□□ 0.55
THBS3-209ENST00000498500 ASXL1Q8IXJ9 1541 aa18.49■□□□□ 0.55
THBS3-209ENST00000498500 DCCP43146 1447 aa18.48■□□□□ 0.55
THBS3-209ENST00000498500 LRRC59Q96AG4 307 aaKnown RBP18.47■□□□□ 0.55
THBS3-209ENST00000498500 SETD5Q9C0A6 1442 aa18.47■□□□□ 0.55
THBS3-209ENST00000498500 C8orf37Q96NL8 207 aa18.46■□□□□ 0.55
THBS3-209ENST00000498500 XRN1Q8IZH2 1706 aaKnown RBP18.46■□□□□ 0.55
THBS3-209ENST00000498500 QTRT2Q9H974 415 aaKnown RBP18.45■□□□□ 0.54
THBS3-209ENST00000498500 MST1RQ04912 1400 aa18.45■□□□□ 0.54
THBS3-209ENST00000498500 NRXN3Q9Y4C0 1643 aa18.45■□□□□ 0.54
THBS3-209ENST00000498500 NUP155O75694 1391 aa18.43■□□□□ 0.54
THBS3-209ENST00000498500 RBM6P78332 1123 aaKnown RBP18.43■□□□□ 0.54
THBS3-209ENST00000498500 ZNF326Q5BKZ1 582 aaKnown RBP18.42■□□□□ 0.54
THBS3-209ENST00000498500 SETBP1Q9Y6X0 1596 aa18.42■□□□□ 0.54
THBS3-209ENST00000498500 RGS12O14924 1447 aa18.41■□□□□ 0.54
THBS3-209ENST00000498500 DDX17Q92841 729 aaKnown RBP18.41■□□□□ 0.54
THBS3-209ENST00000498500 SPHKAPQ2M3C7 1700 aa18.4■□□□□ 0.54
THBS3-209ENST00000498500 ROCK1Q13464 1354 aa18.4■□□□□ 0.54
THBS3-209ENST00000498500 PNPLA6Q8IY17 1366 aa18.4■□□□□ 0.54
THBS3-209ENST00000498500 PPARGC1BQ86YN6 1023 aaKnown RBP18.39■□□□□ 0.53
THBS3-209ENST00000498500 NGLY1Q96IV0 654 aa18.39■□□□□ 0.53
THBS3-209ENST00000498500 NALCNQ8IZF0 1738 aa18.39■□□□□ 0.53
THBS3-209ENST00000498500 METP08581 1390 aa18.39■□□□□ 0.53
THBS3-209ENST00000498500 ADAMTS2O95450 1211 aa18.38■□□□□ 0.53
THBS3-209ENST00000498500 ADGRL3Q9HAR2 1447 aa18.38■□□□□ 0.53
THBS3-209ENST00000498500 ITGAEP38570 1179 aa18.36■□□□□ 0.53
THBS3-209ENST00000498500 RRBP1Q9P2E9 1410 aaKnown RBP18.36■□□□□ 0.53
THBS3-209ENST00000498500 KIF1BO60333 1816 aa18.33■□□□□ 0.52
THBS3-209ENST00000498500 ATAD2Q6PL18 1390 aa18.32■□□□□ 0.52
THBS3-209ENST00000498500 USP21Q9UK80 565 aa18.32■□□□□ 0.52
THBS3-209ENST00000498500 C1orf167Q5SNV9 1468 aa18.32■□□□□ 0.52
THBS3-209ENST00000498500 NEXMIFQ5QGS0 1516 aa18.3■□□□□ 0.52
THBS3-209ENST00000498500 TRPC5Q9UL62 973 aaPredicted RBP18.3■□□□□ 0.52
THBS3-209ENST00000498500 LAMC1P11047 1609 aa18.3■□□□□ 0.52
THBS3-209ENST00000498500 FOXD1Q16676 465 aa18.29■□□□□ 0.52
THBS3-209ENST00000498500 CLTCL1P53675 1640 aa18.29■□□□□ 0.52
THBS3-209ENST00000498500 ORAI2Q96SN7 254 aa18.28■□□□□ 0.52
THBS3-209ENST00000498500 SOS2Q07890 1332 aaPredicted RBP18.27■□□□□ 0.52
THBS3-209ENST00000498500 SRCAPQ6ZRS2 3230 aa18.26■□□□□ 0.51
THBS3-209ENST00000498500 ZRANB1Q9UGI0 708 aa18.26■□□□□ 0.51
THBS3-209ENST00000498500 PTCH1Q13635 1447 aa18.25■□□□□ 0.51
THBS3-209ENST00000498500 FNBP4Q8N3X1 1017 aaPredicted RBP18.25■□□□□ 0.51
THBS3-209ENST00000498500 ROBO2Q9HCK4 1378 aa18.23■□□□□ 0.51
THBS3-209ENST00000498500 MARF1Q9Y4F3 1742 aaKnown RBP18.23■□□□□ 0.51
THBS3-209ENST00000498500 COL22A1Q8NFW1 1626 aaPredicted RBP18.23■□□□□ 0.51
THBS3-209ENST00000498500 VGFO15240 615 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms