RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 SLC52A1Q9NWF4 448 aa21.81■■□□□ 1.08
CCDC58-207ENST00000498466 NWD1Q149M9 1564 aa21.78■■□□□ 1.08
CCDC58-207ENST00000498466 SLAIN2Q9P270 581 aa21.78■■□□□ 1.08
CCDC58-207ENST00000498466 PPP1R15AO75807 674 aaPredicted RBP21.75■■□□□ 1.07
CCDC58-207ENST00000498466 JCADQ9P266 1359 aa21.74■■□□□ 1.07
CCDC58-207ENST00000498466 PLEKHG1Q9ULL1 1385 aa21.73■■□□□ 1.07
CCDC58-207ENST00000498466 PHLPP1O60346 1717 aa21.72■■□□□ 1.07
CCDC58-207ENST00000498466 HDGFP51858 240 aaKnown RBP21.72■■□□□ 1.07
CCDC58-207ENST00000498466 RPRD2Q5VT52 1461 aaKnown RBP21.71■■□□□ 1.07
CCDC58-207ENST00000498466 ZFYVE9O95405 1425 aa21.71■■□□□ 1.07
CCDC58-207ENST00000498466 ADGRL2O95490 1459 aa21.71■■□□□ 1.07
CCDC58-207ENST00000498466 RIMS2Q9UQ26 1411 aa21.7■■□□□ 1.06
CCDC58-207ENST00000498466 C14orf37Q86TY3 774 aa21.69■■□□□ 1.06
CCDC58-207ENST00000498466 ANKRD50Q9ULJ7 1429 aa21.69■■□□□ 1.06
CCDC58-207ENST00000498466 FAM50AQ14320 339 aaKnown RBP21.68■■□□□ 1.06
CCDC58-207ENST00000498466 CHGAP10645 457 aaKnown RBP21.67■■□□□ 1.06
CCDC58-207ENST00000498466 TBX22Q9Y458 520 aa21.66■■□□□ 1.06
CCDC58-207ENST00000498466 SETD1AO15047 1707 aaKnown RBP21.66■■□□□ 1.06
CCDC58-207ENST00000498466 CHD2O14647 1828 aaKnown RBP21.65■■□□□ 1.06
CCDC58-207ENST00000498466 GCC2Q8IWJ2 1684 aa21.65■■□□□ 1.06
CCDC58-207ENST00000498466 NCOA3Q9Y6Q9 1424 aa21.64■■□□□ 1.06
CCDC58-207ENST00000498466 MEX3CQ5U5Q3 659 aaKnown RBP21.64■■□□□ 1.05
CCDC58-207ENST00000498466 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.64■■□□□ 1.05
CCDC58-207ENST00000498466 COL16A1Q07092 1604 aaPredicted RBP21.64■■□□□ 1.05
CCDC58-207ENST00000498466 TMEM131LA2VDJ0 1609 aa21.63■■□□□ 1.05
CCDC58-207ENST00000498466 SPATA31A6Q5VVP1 1343 aa21.63■■□□□ 1.05
CCDC58-207ENST00000498466 MYO5BQ9ULV0 1848 aa21.62■■□□□ 1.05
CCDC58-207ENST00000498466 NUTM2DQ5VT03 806 aaPredicted RBP21.62■■□□□ 1.05
CCDC58-207ENST00000498466 CADPS2Q86UW7 1296 aa21.62■■□□□ 1.05
CCDC58-207ENST00000498466 ATF3P18847 181 aa21.61■■□□□ 1.05
CCDC58-207ENST00000498466 LRP6O75581 1613 aa21.61■■□□□ 1.05
CCDC58-207ENST00000498466 ZNF772Q68DY9 489 aaPredicted RBP21.6■■□□□ 1.05
CCDC58-207ENST00000498466 C19orf44Q9H6X5 657 aa21.6■■□□□ 1.05
CCDC58-207ENST00000498466 ADAMTS13Q76LX8 1427 aa21.59■■□□□ 1.05
CCDC58-207ENST00000498466 TRIM52Q96A61 297 aa21.57■■□□□ 1.04
CCDC58-207ENST00000498466 PIK3R4Q99570 1358 aa21.57■■□□□ 1.04
CCDC58-207ENST00000498466 DIP2AQ14689 1571 aa21.56■■□□□ 1.04
CCDC58-207ENST00000498466 AHDC1Q5TGY3 1603 aaPredicted RBP21.55■■□□□ 1.04
CCDC58-207ENST00000498466 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.55■■□□□ 1.04
CCDC58-207ENST00000498466 UNC13BO14795 1591 aa21.54■■□□□ 1.04
CCDC58-207ENST00000498466 FOXD1Q16676 465 aa21.53■■□□□ 1.04
CCDC58-207ENST00000498466 UPF1Q92900 1129 aaKnown RBP eCLIP21.53■■□□□ 1.04
CCDC58-207ENST00000498466 AMOTL2Q9Y2J4 779 aa21.53■■□□□ 1.04
CCDC58-207ENST00000498466 BRINP3Q76B58 766 aa21.52■■□□□ 1.04
CCDC58-207ENST00000498466 TRPM2O94759 1503 aa21.51■■□□□ 1.03
CCDC58-207ENST00000498466 E9PCH4 1651 aa21.51■■□□□ 1.03
CCDC58-207ENST00000498466 SHPRHQ149N8 1683 aa21.51■■□□□ 1.03
CCDC58-207ENST00000498466 NUTM2BA6NNL0 878 aaPredicted RBP21.51■■□□□ 1.03
CCDC58-207ENST00000498466 NUTM2EB1AL46 878 aaPredicted RBP21.51■■□□□ 1.03
CCDC58-207ENST00000498466 NUTM2AQ8IVF1 878 aaPredicted RBP21.51■■□□□ 1.03
CCDC58-207ENST00000498466 RXRBP28702 533 aa21.5■■□□□ 1.03
CCDC58-207ENST00000498466 PTPRUQ92729 1446 aa21.49■■□□□ 1.03
CCDC58-207ENST00000498466 IQGAP3Q86VI3 1631 aa21.46■■□□□ 1.03
CCDC58-207ENST00000498466 NUP155O75694 1391 aa21.46■■□□□ 1.03
CCDC58-207ENST00000498466 DCCP43146 1447 aa21.46■■□□□ 1.03
CCDC58-207ENST00000498466 ROCK1Q13464 1354 aa21.45■■□□□ 1.02
CCDC58-207ENST00000498466 AFF2P51816 1311 aa21.44■■□□□ 1.02
CCDC58-207ENST00000498466 ASXL1Q8IXJ9 1541 aa21.44■■□□□ 1.02
CCDC58-207ENST00000498466 CDK12Q9NYV4 1490 aaPredicted RBP21.41■■□□□ 1.02
CCDC58-207ENST00000498466 MST1RQ04912 1400 aa21.41■■□□□ 1.02
CCDC58-207ENST00000498466 SETD5Q9C0A6 1442 aa21.41■■□□□ 1.02
CCDC58-207ENST00000498466 ZNF326Q5BKZ1 582 aaKnown RBP21.41■■□□□ 1.02
CCDC58-207ENST00000498466 LRRC59Q96AG4 307 aaKnown RBP21.4■■□□□ 1.02
CCDC58-207ENST00000498466 ITGAEP38570 1179 aa21.39■■□□□ 1.01
CCDC58-207ENST00000498466 XRN1Q8IZH2 1706 aaKnown RBP21.38■■□□□ 1.01
CCDC58-207ENST00000498466 C8orf37Q96NL8 207 aa21.38■■□□□ 1.01
CCDC58-207ENST00000498466 SETBP1Q9Y6X0 1596 aa21.38■■□□□ 1.01
CCDC58-207ENST00000498466 METP08581 1390 aa21.37■■□□□ 1.01
CCDC58-207ENST00000498466 NRXN3Q9Y4C0 1643 aa21.37■■□□□ 1.01
CCDC58-207ENST00000498466 DDX17Q92841 729 aaKnown RBP21.36■■□□□ 1.01
CCDC58-207ENST00000498466 NHSL1Q5SYE7 1610 aa21.36■■□□□ 1.01
CCDC58-207ENST00000498466 QTRT2Q9H974 415 aaKnown RBP21.34■■□□□ 1.01
CCDC58-207ENST00000498466 ADGRL3Q9HAR2 1447 aa21.33■■□□□ 1.01
CCDC58-207ENST00000498466 RBM6P78332 1123 aaKnown RBP21.33■■□□□ 1.01
CCDC58-207ENST00000498466 PNPLA6Q8IY17 1366 aa21.33■■□□□ 1
CCDC58-207ENST00000498466 RGS12O14924 1447 aa21.32■■□□□ 1
CCDC58-207ENST00000498466 SPHKAPQ2M3C7 1700 aa21.31■■□□□ 1
CCDC58-207ENST00000498466 ADAMTS2O95450 1211 aa21.29■■□□□ 1
CCDC58-207ENST00000498466 NGLY1Q96IV0 654 aa21.29■■□□□ 1
CCDC58-207ENST00000498466 SRCAPQ6ZRS2 3230 aa21.29■■□□□ 1
CCDC58-207ENST00000498466 NALCNQ8IZF0 1738 aa21.27■■□□□ 1
CCDC58-207ENST00000498466 C1orf167Q5SNV9 1468 aa21.26■□□□□ 0.99
CCDC58-207ENST00000498466 NEXMIFQ5QGS0 1516 aa21.25■□□□□ 0.99
CCDC58-207ENST00000498466 CLTCL1P53675 1640 aa21.23■□□□□ 0.99
CCDC58-207ENST00000498466 ORAI2Q96SN7 254 aa21.22■□□□□ 0.99
CCDC58-207ENST00000498466 PPARGC1BQ86YN6 1023 aaKnown RBP21.21■□□□□ 0.99
CCDC58-207ENST00000498466 USP21Q9UK80 565 aa21.21■□□□□ 0.99
CCDC58-207ENST00000498466 PTCH1Q13635 1447 aa21.21■□□□□ 0.99
CCDC58-207ENST00000498466 SOS2Q07890 1332 aaPredicted RBP21.2■□□□□ 0.98
CCDC58-207ENST00000498466 ATAD2Q6PL18 1390 aa21.2■□□□□ 0.98
CCDC58-207ENST00000498466 VGFO15240 615 aaPredicted RBP21.19■□□□□ 0.98
CCDC58-207ENST00000498466 TRPC5Q9UL62 973 aaPredicted RBP21.19■□□□□ 0.98
CCDC58-207ENST00000498466 ROBO2Q9HCK4 1378 aa21.19■□□□□ 0.98
CCDC58-207ENST00000498466 LAMC1P11047 1609 aa21.17■□□□□ 0.98
CCDC58-207ENST00000498466 FNBP4Q8N3X1 1017 aaPredicted RBP21.15■□□□□ 0.98
CCDC58-207ENST00000498466 KIF1BO60333 1816 aa21.15■□□□□ 0.98
CCDC58-207ENST00000498466 HFM1A2PYH4 1435 aa21.12■□□□□ 0.97
CCDC58-207ENST00000498466 EP400Q96L91 3159 aa21.12■□□□□ 0.97
CCDC58-207ENST00000498466 ATRNO75882 1429 aa21.12■□□□□ 0.97
CCDC58-207ENST00000498466 ESCO1Q5FWF5 840 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms