RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 XIRP1Q702N8 1843 aaKnown RBP12.89□□□□□ -0.35
HMGXB4-207ENST00000498212 NUP155O75694 1391 aa12.89□□□□□ -0.35
HMGXB4-207ENST00000498212 LRRC7Q96NW7 1537 aa12.87□□□□□ -0.35
HMGXB4-207ENST00000498212 TOM1O60784 492 aa12.85□□□□□ -0.35
HMGXB4-207ENST00000498212 NAIPQ13075 1403 aa12.85□□□□□ -0.35
HMGXB4-207ENST00000498212 ZFYVE9O95405 1425 aa12.84□□□□□ -0.35
HMGXB4-207ENST00000498212 ALKQ9UM73 1620 aa12.84□□□□□ -0.35
HMGXB4-207ENST00000498212 CHD2O14647 1828 aaKnown RBP12.83□□□□□ -0.35
HMGXB4-207ENST00000498212 RIMS2Q9UQ26 1411 aa12.83□□□□□ -0.36
HMGXB4-207ENST00000498212 KIF1BO60333 1816 aa12.83□□□□□ -0.36
HMGXB4-207ENST00000498212 HFM1A2PYH4 1435 aa12.82□□□□□ -0.36
HMGXB4-207ENST00000498212 CHGAP10645 457 aaKnown RBP12.82□□□□□ -0.36
HMGXB4-207ENST00000498212 HDGFP51858 240 aaKnown RBP12.82□□□□□ -0.36
HMGXB4-207ENST00000498212 PIP4K2BP78356 416 aa12.82□□□□□ -0.36
HMGXB4-207ENST00000498212 NWD1Q149M9 1564 aa12.81□□□□□ -0.36
HMGXB4-207ENST00000498212 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
HMGXB4-207ENST00000498212 BCANQ96GW7 911 aa12.81□□□□□ -0.36
HMGXB4-207ENST00000498212 SLC26A8Q96RN1 970 aa12.81□□□□□ -0.36
HMGXB4-207ENST00000498212 PLEKHG1Q9ULL1 1385 aa12.81□□□□□ -0.36
HMGXB4-207ENST00000498212 PPP1R15AO75807 674 aaPredicted RBP12.8□□□□□ -0.36
HMGXB4-207ENST00000498212 CLTCL1P53675 1640 aa12.8□□□□□ -0.36
HMGXB4-207ENST00000498212 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.79□□□□□ -0.36
HMGXB4-207ENST00000498212 NKTRP30414 1462 aaKnown RBP12.78□□□□□ -0.36
HMGXB4-207ENST00000498212 TRPM2O94759 1503 aa12.78□□□□□ -0.36
HMGXB4-207ENST00000498212 DIP2AQ14689 1571 aa12.78□□□□□ -0.36
HMGXB4-207ENST00000498212 KCNA6P17658 529 aa12.78□□□□□ -0.36
HMGXB4-207ENST00000498212 TRIM52Q96A61 297 aa12.76□□□□□ -0.37
HMGXB4-207ENST00000498212 DISP3Q9P2K9 1392 aa12.76□□□□□ -0.37
HMGXB4-207ENST00000498212 HSPA1LP34931 641 aa12.75□□□□□ -0.37
HMGXB4-207ENST00000498212 TMEM94Q12767 1356 aa12.75□□□□□ -0.37
HMGXB4-207ENST00000498212 NUTM2DQ5VT03 806 aaPredicted RBP12.75□□□□□ -0.37
HMGXB4-207ENST00000498212 NRXN3Q9Y4C0 1643 aa12.74□□□□□ -0.37
HMGXB4-207ENST00000498212 ADAMTS13Q76LX8 1427 aa12.74□□□□□ -0.37
HMGXB4-207ENST00000498212 PROSER2Q86WR7 435 aaPredicted RBP12.74□□□□□ -0.37
HMGXB4-207ENST00000498212 TBX22Q9Y458 520 aa12.74□□□□□ -0.37
HMGXB4-207ENST00000498212 DCAF8L1A6NGE4 600 aa12.73□□□□□ -0.37
HMGXB4-207ENST00000498212 PPP4R3CPQ6ZMV5 832 aa12.73□□□□□ -0.37
HMGXB4-207ENST00000498212 SETBP1Q9Y6X0 1596 aa12.73□□□□□ -0.37
HMGXB4-207ENST00000498212 NEXMIFQ5QGS0 1516 aa12.72□□□□□ -0.37
HMGXB4-207ENST00000498212 ZNF326Q5BKZ1 582 aaKnown RBP12.72□□□□□ -0.37
HMGXB4-207ENST00000498212 PIK3R4Q99570 1358 aa12.71□□□□□ -0.37
HMGXB4-207ENST00000498212 ROBO1Q9Y6N7 1651 aa12.71□□□□□ -0.37
HMGXB4-207ENST00000498212 RBM33Q96EV2 1170 aaKnown RBP12.71□□□□□ -0.37
HMGXB4-207ENST00000498212 SLC4A1APQ9BWU0 796 aaKnown RBP12.71□□□□□ -0.37
HMGXB4-207ENST00000498212 PPLO60437 1756 aa12.71□□□□□ -0.38
HMGXB4-207ENST00000498212 MED1Q15648 1581 aaPredicted RBP12.7□□□□□ -0.38
HMGXB4-207ENST00000498212 MSH6P52701 1360 aa12.69□□□□□ -0.38
HMGXB4-207ENST00000498212 XRN1Q8IZH2 1706 aaKnown RBP12.69□□□□□ -0.38
HMGXB4-207ENST00000498212 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.69□□□□□ -0.38
HMGXB4-207ENST00000498212 FAM135BQ49AJ0 1406 aa12.68□□□□□ -0.38
HMGXB4-207ENST00000498212 NCOA3Q9Y6Q9 1424 aa12.68□□□□□ -0.38
HMGXB4-207ENST00000498212 SETD1AO15047 1707 aaKnown RBP12.68□□□□□ -0.38
HMGXB4-207ENST00000498212 PHLPP1O60346 1717 aa12.66□□□□□ -0.38
HMGXB4-207ENST00000498212 PTPRUQ92729 1446 aa12.66□□□□□ -0.38
HMGXB4-207ENST00000498212 HOXD11P31277 338 aaPredicted RBP12.66□□□□□ -0.38
HMGXB4-207ENST00000498212 IFT172Q9UG01 1749 aa12.65□□□□□ -0.38
HMGXB4-207ENST00000498212 ILDR2Q71H61 639 aa12.65□□□□□ -0.38
HMGXB4-207ENST00000498212 AMOTL2Q9Y2J4 779 aa12.65□□□□□ -0.38
HMGXB4-207ENST00000498212 SETD5Q9C0A6 1442 aa12.64□□□□□ -0.39
HMGXB4-207ENST00000498212 C14orf37Q86TY3 774 aa12.64□□□□□ -0.39
HMGXB4-207ENST00000498212 MPHOSPH9Q99550 1183 aa12.64□□□□□ -0.39
HMGXB4-207ENST00000498212 ACIN1Q9UKV3 1341 aaKnown RBP12.63□□□□□ -0.39
HMGXB4-207ENST00000498212 CCDC144AA2RUR9 1427 aa12.63□□□□□ -0.39
HMGXB4-207ENST00000498212 METP08581 1390 aa12.63□□□□□ -0.39
HMGXB4-207ENST00000498212 RPGRIP1LQ68CZ1 1315 aa12.62□□□□□ -0.39
HMGXB4-207ENST00000498212 VGFO15240 615 aaPredicted RBP12.62□□□□□ -0.39
HMGXB4-207ENST00000498212 SLAIN2Q9P270 581 aa12.62□□□□□ -0.39
HMGXB4-207ENST00000498212 NALCNQ8IZF0 1738 aa12.62□□□□□ -0.39
HMGXB4-207ENST00000498212 C19orf44Q9H6X5 657 aa12.61□□□□□ -0.39
HMGXB4-207ENST00000498212 CADPS2Q86UW7 1296 aa12.6□□□□□ -0.39
HMGXB4-207ENST00000498212 RAB3GAP2Q9H2M9 1393 aa12.59□□□□□ -0.39
HMGXB4-207ENST00000498212 ATF3P18847 181 aa12.59□□□□□ -0.39
HMGXB4-207ENST00000498212 DCCP43146 1447 aa12.59□□□□□ -0.39
HMGXB4-207ENST00000498212 COL16A1Q07092 1604 aaPredicted RBP12.59□□□□□ -0.39
HMGXB4-207ENST00000498212 SPATA31E1Q6ZUB1 1445 aa12.58□□□□□ -0.4
HMGXB4-207ENST00000498212 RNF39Q9H2S5 420 aa12.58□□□□□ -0.4
HMGXB4-207ENST00000498212 AHDC1Q5TGY3 1603 aaPredicted RBP12.57□□□□□ -0.4
HMGXB4-207ENST00000498212 PTCH1Q13635 1447 aa12.56□□□□□ -0.4
HMGXB4-207ENST00000498212 ADGRL3Q9HAR2 1447 aa12.56□□□□□ -0.4
HMGXB4-207ENST00000498212 RGL3Q3MIN7 710 aa12.56□□□□□ -0.4
HMGXB4-207ENST00000498212 ANKRD30BQ9BXX2 1392 aa12.56□□□□□ -0.4
HMGXB4-207ENST00000498212 KNDC1Q76NI1 1749 aa12.55□□□□□ -0.4
HMGXB4-207ENST00000498212 SOCS7O14512 581 aa12.55□□□□□ -0.4
HMGXB4-207ENST00000498212 NHSL1Q5SYE7 1610 aa12.55□□□□□ -0.4
HMGXB4-207ENST00000498212 SHPRHQ149N8 1683 aa12.54□□□□□ -0.4
HMGXB4-207ENST00000498212 MST1RQ04912 1400 aa12.54□□□□□ -0.4
HMGXB4-207ENST00000498212 PRAG1Q86YV5 1406 aa12.54□□□□□ -0.4
HMGXB4-207ENST00000498212 ADGRF5Q8IZF2 1346 aa12.54□□□□□ -0.4
HMGXB4-207ENST00000498212 ASXL1Q8IXJ9 1541 aa12.53□□□□□ -0.4
HMGXB4-207ENST00000498212 LAMC1P11047 1609 aa12.53□□□□□ -0.4
HMGXB4-207ENST00000498212 JCADQ9P266 1359 aa12.53□□□□□ -0.4
HMGXB4-207ENST00000498212 BRINP3Q76B58 766 aa12.52□□□□□ -0.41
HMGXB4-207ENST00000498212 ROBO2Q9HCK4 1378 aa12.52□□□□□ -0.41
HMGXB4-207ENST00000498212 PIK3C2GO75747 1445 aa12.52□□□□□ -0.41
HMGXB4-207ENST00000498212 CNKSR2Q8WXI2 1034 aa12.51□□□□□ -0.41
HMGXB4-207ENST00000498212 MYOM2P54296 1465 aa12.5□□□□□ -0.41
HMGXB4-207ENST00000498212 HRCP23327 699 aa12.49□□□□□ -0.41
HMGXB4-207ENST00000498212 CDC42BPGQ6DT37 1551 aa12.48□□□□□ -0.41
HMGXB4-207ENST00000498212 C1orf167Q5SNV9 1468 aa12.48□□□□□ -0.41
HMGXB4-207ENST00000498212 NRXN1Q9ULB1 1477 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms