RNA–Protein interactions for RNA: ENST00000498183.5

GRAMD1C-215, Transcript of GRAM domain containing 1C, human

TSL 2

Gene GRAMD1C, Length 735 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRAMD1C-215	ENST00000498183	ZFYVE9	O95405	1425 aa		32.11	■■■□□ 2.73
GRAMD1C-215	ENST00000498183	LTK	P29376	864 aa		32.11	■■■□□ 2.73
GRAMD1C-215	ENST00000498183	RPGRIP1L	Q68CZ1	1315 aa		32.09	■■■□□ 2.73
GRAMD1C-215	ENST00000498183	TXNDC2	Q86VQ3	553 aa		32.09	■■■□□ 2.73
GRAMD1C-215	ENST00000498183	L3MBTL2	Q969R5	705 aa		32.09	■■■□□ 2.73
GRAMD1C-215	ENST00000498183	NCKAP5L	Q9HCH0	1330 aa		32.08	■■■□□ 2.73
GRAMD1C-215	ENST00000498183	DCAF11	Q8TEB1	546 aa		32.07	■■■□□ 2.72
GRAMD1C-215	ENST00000498183	SENP3	Q9H4L4	574 aa	Predicted RBP	32.07	■■■□□ 2.72
GRAMD1C-215	ENST00000498183	KDM2A	Q9Y2K7	1162 aa		32.07	■■■□□ 2.72
GRAMD1C-215	ENST00000498183	PPL	O60437	1756 aa		32.07	■■■□□ 2.72
GRAMD1C-215	ENST00000498183	ANKLE2	Q86XL3	938 aa		32.06	■■■□□ 2.72
GRAMD1C-215	ENST00000498183	IFT172	Q9UG01	1749 aa		32.06	■■■□□ 2.72
GRAMD1C-215	ENST00000498183	TONSL	Q96HA7	1378 aa		32.06	■■■□□ 2.72
GRAMD1C-215	ENST00000498183	EID1	Q9Y6B2	187 aa		32.05	■■■□□ 2.72
GRAMD1C-215	ENST00000498183	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.04	■■■□□ 2.72
GRAMD1C-215	ENST00000498183	PPP1R15A	O75807	674 aa	Predicted RBP	32.02	■■■□□ 2.72
GRAMD1C-215	ENST00000498183	HDGF	P51858	240 aa	Known RBP	32.02	■■■□□ 2.72
GRAMD1C-215	ENST00000498183	SCAF11	Q99590	1463 aa	Known RBP	32.02	■■■□□ 2.72
GRAMD1C-215	ENST00000498183	ADGRF5	Q8IZF2	1346 aa		32.01	■■■□□ 2.72
GRAMD1C-215	ENST00000498183	VGF	O15240	615 aa	Predicted RBP	31.98	■■■□□ 2.71
GRAMD1C-215	ENST00000498183	STRC	Q7RTU9	1775 aa		31.98	■■■□□ 2.71
GRAMD1C-215	ENST00000498183	POLR1A	O95602	1720 aa	Predicted RBP	31.97	■■■□□ 2.71
GRAMD1C-215	ENST00000498183	MYOM2	P54296	1465 aa		31.95	■■■□□ 2.7
GRAMD1C-215	ENST00000498183	BCAN	Q96GW7	911 aa		31.93	■■■□□ 2.7
GRAMD1C-215	ENST00000498183	PLEKHG1	Q9ULL1	1385 aa		31.93	■■■□□ 2.7
GRAMD1C-215	ENST00000498183	NPHP4	O75161	1426 aa	Predicted RBP	31.92	■■■□□ 2.7
GRAMD1C-215	ENST00000498183	MED14	O60244	1454 aa		31.91	■■■□□ 2.7
GRAMD1C-215	ENST00000498183	TIMELESS	Q9UNS1	1208 aa		31.9	■■■□□ 2.7
GRAMD1C-215	ENST00000498183	NRXN1	Q9ULB1	1477 aa		31.89	■■■□□ 2.7
GRAMD1C-215	ENST00000498183	STAC3	Q96MF2	364 aa		31.88	■■■□□ 2.69
GRAMD1C-215	ENST00000498183	IQGAP1	P46940	1657 aa		31.86	■■■□□ 2.69
GRAMD1C-215	ENST00000498183	NRXN3	Q9Y4C0	1643 aa		31.86	■■■□□ 2.69
GRAMD1C-215	ENST00000498183	NBPF8	Q3BBV2	869 aa		31.86	■■■□□ 2.69
GRAMD1C-215	ENST00000498183	SLC26A8	Q96RN1	970 aa		31.86	■■■□□ 2.69
GRAMD1C-215	ENST00000498183	PIK3C2G	O75747	1445 aa		31.85	■■■□□ 2.69
GRAMD1C-215	ENST00000498183	PRAG1	Q86YV5	1406 aa		31.84	■■■□□ 2.69
GRAMD1C-215	ENST00000498183	ADAMTS13	Q76LX8	1427 aa		31.83	■■■□□ 2.69
GRAMD1C-215	ENST00000498183	SETBP1	Q9Y6X0	1596 aa		31.83	■■■□□ 2.69
GRAMD1C-215	ENST00000498183	CFAP70	Q5T0N1	1121 aa		31.82	■■■□□ 2.68
GRAMD1C-215	ENST00000498183	ALK	Q9UM73	1620 aa		31.79	■■■□□ 2.68
GRAMD1C-215	ENST00000498183	C14orf93	Q9H972	538 aa	Known RBP	31.78	■■■□□ 2.68
GRAMD1C-215	ENST00000498183	TBX22	Q9Y458	520 aa		31.76	■■■□□ 2.67
GRAMD1C-215	ENST00000498183	DMRT2	Q9Y5R5	561 aa		31.74	■■■□□ 2.67
GRAMD1C-215	ENST00000498183	SETD1A	O15047	1707 aa	Known RBP	31.74	■■■□□ 2.67
GRAMD1C-215	ENST00000498183	MET	P08581	1390 aa		31.73	■■■□□ 2.67
GRAMD1C-215	ENST00000498183	TMEM132E	Q6IEE7	984 aa		31.73	■■■□□ 2.67
GRAMD1C-215	ENST00000498183	NBPF1	Q3BBV0	1214 aa		31.72	■■■□□ 2.67
GRAMD1C-215	ENST00000498183	DIP2A	Q14689	1571 aa		31.71	■■■□□ 2.67
GRAMD1C-215	ENST00000498183	ASXL1	Q8IXJ9	1541 aa		31.7	■■■□□ 2.66
GRAMD1C-215	ENST00000498183	TRPM1	Q7Z4N2	1603 aa		31.69	■■■□□ 2.66
GRAMD1C-215	ENST00000498183	LAMC1	P11047	1609 aa		31.68	■■■□□ 2.66
GRAMD1C-215	ENST00000498183	KIAA1210	Q9ULL0	1709 aa		31.66	■■■□□ 2.66
GRAMD1C-215	ENST00000498183	PTPRU	Q92729	1446 aa		31.66	■■■□□ 2.66
GRAMD1C-215	ENST00000498183	ADGRB1	O14514	1584 aa		31.64	■■■□□ 2.65
GRAMD1C-215	ENST00000498183	RALGAPB	Q86X10	1494 aa		31.63	■■■□□ 2.65
GRAMD1C-215	ENST00000498183	STK26	Q9P289	416 aa		31.62	■■■□□ 2.65
GRAMD1C-215	ENST00000498183	ROCK2	O75116	1388 aa	Known RBP	31.6	■■■□□ 2.65
GRAMD1C-215	ENST00000498183	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	31.6	■■■□□ 2.65
GRAMD1C-215	ENST00000498183	PIK3R4	Q99570	1358 aa		31.59	■■■□□ 2.65
GRAMD1C-215	ENST00000498183	AMOTL2	Q9Y2J4	779 aa		31.59	■■■□□ 2.65
GRAMD1C-215	ENST00000498183	CHD2	O14647	1828 aa	Known RBP	31.59	■■■□□ 2.65
GRAMD1C-215	ENST00000498183	KCNA6	P17658	529 aa		31.58	■■■□□ 2.65
GRAMD1C-215	ENST00000498183	ZEB1	P37275	1124 aa	Predicted RBP	31.58	■■■□□ 2.65
GRAMD1C-215	ENST00000498183	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.58	■■■□□ 2.65
GRAMD1C-215	ENST00000498183	LRPPRC	P42704	1394 aa	Known RBP	31.56	■■■□□ 2.64
GRAMD1C-215	ENST00000498183	STRCP1	A6NGW2	1772 aa		31.56	■■■□□ 2.64
GRAMD1C-215	ENST00000498183	GPRASP1	Q5JY77	1395 aa		31.55	■■■□□ 2.64
GRAMD1C-215	ENST00000498183	CARD11	Q9BXL7	1154 aa		31.54	■■■□□ 2.64
GRAMD1C-215	ENST00000498183	TRAK1	Q9UPV9	953 aa		31.53	■■■□□ 2.64
GRAMD1C-215	ENST00000498183	NWD1	Q149M9	1564 aa		31.52	■■■□□ 2.64
GRAMD1C-215	ENST00000498183	XRN1	Q8IZH2	1706 aa	Known RBP	31.52	■■■□□ 2.64
GRAMD1C-215	ENST00000498183	ABCC11	Q96J66	1382 aa		31.5	■■■□□ 2.63
GRAMD1C-215	ENST00000498183	ROBO2	Q9HCK4	1378 aa		31.47	■■■□□ 2.63
GRAMD1C-215	ENST00000498183	RBM33	Q96EV2	1170 aa	Known RBP	31.46	■■■□□ 2.63
GRAMD1C-215	ENST00000498183	KNDC1	Q76NI1	1749 aa		31.46	■■■□□ 2.63
GRAMD1C-215	ENST00000498183	TECPR2	O15040	1411 aa		31.45	■■■□□ 2.63
GRAMD1C-215	ENST00000498183	WAPL	Q7Z5K2	1190 aa		31.45	■■■□□ 2.63
GRAMD1C-215	ENST00000498183	PROSER2	Q86WR7	435 aa	Predicted RBP	31.43	■■■□□ 2.62
GRAMD1C-215	ENST00000498183	CPS1	P31327	1500 aa		31.43	■■■□□ 2.62
GRAMD1C-215	ENST00000498183	PLEKHH1	Q9ULM0	1364 aa		31.43	■■■□□ 2.62
GRAMD1C-215	ENST00000498183	LTBP4	Q8N2S1	1624 aa		31.42	■■■□□ 2.62
GRAMD1C-215	ENST00000498183	NKTR	P30414	1462 aa	Known RBP	31.41	■■■□□ 2.62
GRAMD1C-215	ENST00000498183	DLC1	Q96QB1	1528 aa		31.41	■■■□□ 2.62
GRAMD1C-215	ENST00000498183	PRAM1	Q96QH2	718 aa		31.41	■■■□□ 2.62
GRAMD1C-215	ENST00000498183	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.41	■■■□□ 2.62
GRAMD1C-215	ENST00000498183	PTCH1	Q13635	1447 aa		31.41	■■■□□ 2.62
GRAMD1C-215	ENST00000498183	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.39	■■■□□ 2.62
GRAMD1C-215	ENST00000498183	SIRT1	Q96EB6	747 aa		31.38	■■■□□ 2.61
GRAMD1C-215	ENST00000498183	POGK	Q9P215	609 aa		31.37	■■■□□ 2.61
GRAMD1C-215	ENST00000498183	LRRC7	Q96NW7	1537 aa		31.37	■■■□□ 2.61
GRAMD1C-215	ENST00000498183	FAM135B	Q49AJ0	1406 aa		31.36	■■■□□ 2.61
GRAMD1C-215	ENST00000498183	USP47	Q96K76	1375 aa		31.36	■■■□□ 2.61
GRAMD1C-215	ENST00000498183	TMEM94	Q12767	1356 aa		31.35	■■■□□ 2.61
GRAMD1C-215	ENST00000498183	CENPJ	Q9HC77	1338 aa	Predicted RBP	31.31	■■■□□ 2.6
GRAMD1C-215	ENST00000498183	XIRP1	Q702N8	1843 aa	Known RBP	31.31	■■■□□ 2.6
GRAMD1C-215	ENST00000498183	ST20-MTHFS	A0A0A6YYL1	179 aa		31.3	■■■□□ 2.6
GRAMD1C-215	ENST00000498183	HSPA5	P11021	654 aa	Known RBP	31.3	■■■□□ 2.6
GRAMD1C-215	ENST00000498183	EIF3A	Q14152	1382 aa	Known RBP	31.3	■■■□□ 2.6
GRAMD1C-215	ENST00000498183	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	31.29	■■■□□ 2.6
GRAMD1C-215	ENST00000498183	MINK1	Q8N4C8	1332 aa	Predicted RBP	31.28	■■■□□ 2.6

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms