RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 MED14O60244 1454 aa23.38■■□□□ 1.33
SSBP1-214ENST00000498107 RIMS2Q9UQ26 1411 aa23.38■■□□□ 1.33
SSBP1-214ENST00000498107 ZFYVE9O95405 1425 aa23.36■■□□□ 1.33
SSBP1-214ENST00000498107 PPP1R15AO75807 674 aaPredicted RBP23.36■■□□□ 1.33
SSBP1-214ENST00000498107 NEURL4Q96JN8 1562 aa23.35■■□□□ 1.33
SSBP1-214ENST00000498107 NPHP4O75161 1426 aaPredicted RBP23.35■■□□□ 1.33
SSBP1-214ENST00000498107 LTKP29376 864 aa23.35■■□□□ 1.33
SSBP1-214ENST00000498107 RPGRIP1LQ68CZ1 1315 aa23.34■■□□□ 1.33
SSBP1-214ENST00000498107 DHX57Q6P158 1386 aaKnown RBP23.33■■□□□ 1.33
SSBP1-214ENST00000498107 IQGAP1P46940 1657 aa23.32■■□□□ 1.32
SSBP1-214ENST00000498107 SPATA31E1Q6ZUB1 1445 aa23.31■■□□□ 1.32
SSBP1-214ENST00000498107 PLEKHG1Q9ULL1 1385 aa23.29■■□□□ 1.32
SSBP1-214ENST00000498107 VGFO15240 615 aaPredicted RBP23.28■■□□□ 1.32
SSBP1-214ENST00000498107 BCANQ96GW7 911 aa23.28■■□□□ 1.32
SSBP1-214ENST00000498107 NEXMIFQ5QGS0 1516 aa23.28■■□□□ 1.32
SSBP1-214ENST00000498107 RGL3Q3MIN7 710 aa23.27■■□□□ 1.32
SSBP1-214ENST00000498107 NUTM2DQ5VT03 806 aaPredicted RBP23.25■■□□□ 1.31
SSBP1-214ENST00000498107 PPLO60437 1756 aa23.23■■□□□ 1.31
SSBP1-214ENST00000498107 STAC3Q96MF2 364 aa23.2■■□□□ 1.3
SSBP1-214ENST00000498107 FBXO41Q8TF61 875 aa23.19■■□□□ 1.3
SSBP1-214ENST00000498107 IFT172Q9UG01 1749 aa23.19■■□□□ 1.3
SSBP1-214ENST00000498107 DIP2AQ14689 1571 aa23.18■■□□□ 1.3
SSBP1-214ENST00000498107 SLC26A8Q96RN1 970 aa23.18■■□□□ 1.3
SSBP1-214ENST00000498107 TBX22Q9Y458 520 aa23.18■■□□□ 1.3
SSBP1-214ENST00000498107 SETBP1Q9Y6X0 1596 aa23.18■■□□□ 1.3
SSBP1-214ENST00000498107 ADAMTS13Q76LX8 1427 aa23.15■■□□□ 1.3
SSBP1-214ENST00000498107 ZNF335Q9H4Z2 1342 aaPredicted RBP23.14■■□□□ 1.3
SSBP1-214ENST00000498107 CLSPNQ9HAW4 1339 aa23.14■■□□□ 1.3
SSBP1-214ENST00000498107 MYOM2P54296 1465 aa23.14■■□□□ 1.29
SSBP1-214ENST00000498107 NEUROD1Q13562 356 aa23.13■■□□□ 1.29
SSBP1-214ENST00000498107 DCAF11Q8TEB1 546 aa23.13■■□□□ 1.29
SSBP1-214ENST00000498107 SIN3AQ96ST3 1273 aa23.13■■□□□ 1.29
SSBP1-214ENST00000498107 SENP3Q9H4L4 574 aaPredicted RBP23.13■■□□□ 1.29
SSBP1-214ENST00000498107 PIK3R4Q99570 1358 aa23.13■■□□□ 1.29
SSBP1-214ENST00000498107 NRXN3Q9Y4C0 1643 aa23.11■■□□□ 1.29
SSBP1-214ENST00000498107 ADGRF5Q8IZF2 1346 aa23.11■■□□□ 1.29
SSBP1-214ENST00000498107 CPS1P31327 1500 aa23.1■■□□□ 1.29
SSBP1-214ENST00000498107 KCNA6P17658 529 aa23.1■■□□□ 1.29
SSBP1-214ENST00000498107 PIK3C2GO75747 1445 aa23.08■■□□□ 1.29
SSBP1-214ENST00000498107 LTBP4Q8N2S1 1624 aa23.08■■□□□ 1.29
SSBP1-214ENST00000498107 KDM2AQ9Y2K7 1162 aa23.08■■□□□ 1.29
SSBP1-214ENST00000498107 NRXN1Q9ULB1 1477 aa23.08■■□□□ 1.29
SSBP1-214ENST00000498107 CCER1Q8TC90 406 aaPredicted RBP23.07■■□□□ 1.28
SSBP1-214ENST00000498107 ALKQ9UM73 1620 aa23.06■■□□□ 1.28
SSBP1-214ENST00000498107 CHD2O14647 1828 aaKnown RBP23.05■■□□□ 1.28
SSBP1-214ENST00000498107 NWD1Q149M9 1564 aa23.04■■□□□ 1.28
SSBP1-214ENST00000498107 LAMC1P11047 1609 aa23.04■■□□□ 1.28
SSBP1-214ENST00000498107 TONSLQ96HA7 1378 aa23.03■■□□□ 1.28
SSBP1-214ENST00000498107 CERKQ8TCT0 537 aa23.03■■□□□ 1.28
SSBP1-214ENST00000498107 L3MBTL2Q969R5 705 aa23.03■■□□□ 1.28
SSBP1-214ENST00000498107 NKTRP30414 1462 aaKnown RBP23.03■■□□□ 1.28
SSBP1-214ENST00000498107 C14orf93Q9H972 538 aaKnown RBP23.02■■□□□ 1.28
SSBP1-214ENST00000498107 METP08581 1390 aa23.01■■□□□ 1.27
SSBP1-214ENST00000498107 STRCP1A6NGW2 1772 aa23.01■■□□□ 1.27
SSBP1-214ENST00000498107 IQSEC2Q5JU85 1478 aa23.01■■□□□ 1.27
SSBP1-214ENST00000498107 SETD1AO15047 1707 aaKnown RBP23.01■■□□□ 1.27
SSBP1-214ENST00000498107 AMOTL2Q9Y2J4 779 aa23■■□□□ 1.27
SSBP1-214ENST00000498107 PROSER2Q86WR7 435 aaPredicted RBP22.98■■□□□ 1.27
SSBP1-214ENST00000498107 CFAP70Q5T0N1 1121 aa22.97■■□□□ 1.27
SSBP1-214ENST00000498107 PTPRUQ92729 1446 aa22.97■■□□□ 1.27
SSBP1-214ENST00000498107 LRRC7Q96NW7 1537 aa22.97■■□□□ 1.27
SSBP1-214ENST00000498107 TIMELESSQ9UNS1 1208 aa22.96■■□□□ 1.27
SSBP1-214ENST00000498107 PRAG1Q86YV5 1406 aa22.95■■□□□ 1.26
SSBP1-214ENST00000498107 XRN1Q8IZH2 1706 aaKnown RBP22.95■■□□□ 1.26
SSBP1-214ENST00000498107 KIAA1210Q9ULL0 1709 aa22.93■■□□□ 1.26
SSBP1-214ENST00000498107 NCOA3Q9Y6Q9 1424 aa22.92■■□□□ 1.26
SSBP1-214ENST00000498107 LRPPRCP42704 1394 aaKnown RBP22.92■■□□□ 1.26
SSBP1-214ENST00000498107 TMEM94Q12767 1356 aa22.91■■□□□ 1.26
SSBP1-214ENST00000498107 TMEM132EQ6IEE7 984 aa22.91■■□□□ 1.26
SSBP1-214ENST00000498107 PTCH1Q13635 1447 aa22.91■■□□□ 1.26
SSBP1-214ENST00000498107 YTHDC2Q9H6S0 1430 aaKnown RBP22.91■■□□□ 1.26
SSBP1-214ENST00000498107 ABCC11Q96J66 1382 aa22.89■■□□□ 1.26
SSBP1-214ENST00000498107 ASXL1Q8IXJ9 1541 aa22.89■■□□□ 1.26
SSBP1-214ENST00000498107 STK26Q9P289 416 aa22.88■■□□□ 1.25
SSBP1-214ENST00000498107 TECPR2O15040 1411 aa22.88■■□□□ 1.25
SSBP1-214ENST00000498107 C14orf37Q86TY3 774 aa22.87■■□□□ 1.25
SSBP1-214ENST00000498107 ADGRB1O14514 1584 aa22.87■■□□□ 1.25
SSBP1-214ENST00000498107 KNDC1Q76NI1 1749 aa22.87■■□□□ 1.25
SSBP1-214ENST00000498107 SIRT1Q96EB6 747 aa22.86■■□□□ 1.25
SSBP1-214ENST00000498107 XIRP1Q702N8 1843 aaKnown RBP22.85■■□□□ 1.25
SSBP1-214ENST00000498107 MSH6P52701 1360 aa22.85■■□□□ 1.25
SSBP1-214ENST00000498107 ROBO2Q9HCK4 1378 aa22.84■■□□□ 1.25
SSBP1-214ENST00000498107 TOM1O60784 492 aa22.83■■□□□ 1.25
SSBP1-214ENST00000498107 FAM135BQ49AJ0 1406 aa22.82■■□□□ 1.24
SSBP1-214ENST00000498107 RBM33Q96EV2 1170 aaKnown RBP22.82■■□□□ 1.24
SSBP1-214ENST00000498107 C19orf44Q9H6X5 657 aa22.82■■□□□ 1.24
SSBP1-214ENST00000498107 TRPM1Q7Z4N2 1603 aa22.82■■□□□ 1.24
SSBP1-214ENST00000498107 DLC1Q96QB1 1528 aa22.82■■□□□ 1.24
SSBP1-214ENST00000498107 UBAP1LF5GYI3 381 aa22.8■■□□□ 1.24
SSBP1-214ENST00000498107 ROCK2O75116 1388 aaKnown RBP22.79■■□□□ 1.24
SSBP1-214ENST00000498107 NBPF1Q3BBV0 1214 aa22.79■■□□□ 1.24
SSBP1-214ENST00000498107 NBPF8Q3BBV2 869 aa22.79■■□□□ 1.24
SSBP1-214ENST00000498107 TRAK1Q9UPV9 953 aa22.79■■□□□ 1.24
SSBP1-214ENST00000498107 ADGRL3Q9HAR2 1447 aa22.78■■□□□ 1.24
SSBP1-214ENST00000498107 DCCP43146 1447 aa22.77■■□□□ 1.24
SSBP1-214ENST00000498107 CADPS2Q86UW7 1296 aa22.77■■□□□ 1.24
SSBP1-214ENST00000498107 POGKQ9P215 609 aa22.77■■□□□ 1.24
SSBP1-214ENST00000498107 ATF3P18847 181 aa22.76■■□□□ 1.23
SSBP1-214ENST00000498107 RALGAPBQ86X10 1494 aa22.75■■□□□ 1.23
SSBP1-214ENST00000498107 WAPLQ7Z5K2 1190 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms