RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 WDR7Q9Y4E6 1490 aa10.49□□□□□ -0.73
HLA-DMB-262ENST00000498020 RTEL1-TNFRSF6BF6WH68 1400 aa10.49□□□□□ -0.73
HLA-DMB-262ENST00000498020 PNISRQ8TF01 805 aaKnown RBP10.48□□□□□ -0.73
HLA-DMB-262ENST00000498020 SAMD9LQ8IVG5 1584 aa10.48□□□□□ -0.73
HLA-DMB-262ENST00000498020 B4GALNT3Q6L9W6 998 aa10.48□□□□□ -0.73
HLA-DMB-262ENST00000498020 KDM5BQ9UGL1 1544 aa10.48□□□□□ -0.73
HLA-DMB-262ENST00000498020 PRAG1Q86YV5 1406 aa10.47□□□□□ -0.73
HLA-DMB-262ENST00000498020 DHX29Q7Z478 1369 aaKnown RBP10.47□□□□□ -0.73
HLA-DMB-262ENST00000498020 CDC42BPAQ5VT25 1732 aa10.47□□□□□ -0.73
HLA-DMB-262ENST00000498020 LTV1Q96GA3 475 aaPredicted RBP10.47□□□□□ -0.73
HLA-DMB-262ENST00000498020 SLC26A8Q96RN1 970 aa10.47□□□□□ -0.73
HLA-DMB-262ENST00000498020 DMRT2Q9Y5R5 561 aa10.47□□□□□ -0.73
HLA-DMB-262ENST00000498020 PREX2Q70Z35 1606 aa10.47□□□□□ -0.73
HLA-DMB-262ENST00000498020 ANKLE2Q86XL3 938 aa10.46□□□□□ -0.73
HLA-DMB-262ENST00000498020 THEMISQ8N1K5 641 aaPredicted RBP10.46□□□□□ -0.73
HLA-DMB-262ENST00000498020 KDM5DQ9BY66 1539 aa10.46□□□□□ -0.73
HLA-DMB-262ENST00000498020 RBM33Q96EV2 1170 aaKnown RBP10.46□□□□□ -0.74
HLA-DMB-262ENST00000498020 CFAP53Q96M91 514 aa10.46□□□□□ -0.74
HLA-DMB-262ENST00000498020 CD109Q6YHK3 1445 aa10.46□□□□□ -0.74
HLA-DMB-262ENST00000498020 ASXL2Q76L83 1435 aa10.46□□□□□ -0.74
HLA-DMB-262ENST00000498020 VGFO15240 615 aaPredicted RBP10.45□□□□□ -0.74
HLA-DMB-262ENST00000498020 RCAN3Q9UKA8 241 aa10.45□□□□□ -0.74
HLA-DMB-262ENST00000498020 SYTL4Q96C24 671 aaPredicted RBP10.45□□□□□ -0.74
HLA-DMB-262ENST00000498020 ANP32AP39687 249 aaKnown RBP10.44□□□□□ -0.74
HLA-DMB-262ENST00000498020 CFAP70Q5T0N1 1121 aa10.44□□□□□ -0.74
HLA-DMB-262ENST00000498020 SHROOM2Q13796 1616 aa10.44□□□□□ -0.74
HLA-DMB-262ENST00000498020 PSME1Q06323 249 aa10.43□□□□□ -0.74
HLA-DMB-262ENST00000498020 TTC37Q6PGP7 1564 aa10.43□□□□□ -0.74
HLA-DMB-262ENST00000498020 TRAK1Q9UPV9 953 aa10.43□□□□□ -0.74
HLA-DMB-262ENST00000498020 RBM19Q9Y4C8 960 aaKnown RBP10.43□□□□□ -0.74
HLA-DMB-262ENST00000498020 MORC1Q86VD1 984 aa10.43□□□□□ -0.74
HLA-DMB-262ENST00000498020 CROCC2H7BZ55 1655 aa10.42□□□□□ -0.74
HLA-DMB-262ENST00000498020 MYO5CQ9NQX4 1742 aa10.42□□□□□ -0.74
HLA-DMB-262ENST00000498020 POGZQ7Z3K3 1410 aa10.42□□□□□ -0.74
HLA-DMB-262ENST00000498020 CENPJQ9HC77 1338 aaPredicted RBP10.42□□□□□ -0.74
HLA-DMB-262ENST00000498020 GPRASP1Q5JY77 1395 aa10.41□□□□□ -0.74
HLA-DMB-262ENST00000498020 MAST1Q9Y2H9 1570 aa10.41□□□□□ -0.74
HLA-DMB-262ENST00000498020 A2MP01023 1474 aa10.41□□□□□ -0.74
HLA-DMB-262ENST00000498020 SMG6Q86US8 1419 aaKnown RBP10.41□□□□□ -0.74
HLA-DMB-262ENST00000498020 RPGRIP1LQ68CZ1 1315 aa10.4□□□□□ -0.74
HLA-DMB-262ENST00000498020 ADAMTS2O95450 1211 aa10.4□□□□□ -0.74
HLA-DMB-262ENST00000498020 TOM1O60784 492 aa10.4□□□□□ -0.75
HLA-DMB-262ENST00000498020 TESK2Q96S53 571 aa10.39□□□□□ -0.75
HLA-DMB-262ENST00000498020 ZNF518AQ6AHZ1 1483 aa10.39□□□□□ -0.75
HLA-DMB-262ENST00000498020 SCAF11Q99590 1463 aaKnown RBP10.39□□□□□ -0.75
HLA-DMB-262ENST00000498020 ABCC1P33527 1531 aa10.38□□□□□ -0.75
HLA-DMB-262ENST00000498020 EIF2AK4Q9P2K8 1649 aaKnown RBP10.38□□□□□ -0.75
HLA-DMB-262ENST00000498020 ZCCHC11Q5TAX3 1644 aaKnown RBP10.38□□□□□ -0.75
HLA-DMB-262ENST00000498020 GOLGA2Q08379 1002 aa10.38□□□□□ -0.75
HLA-DMB-262ENST00000498020 DISP3Q9P2K9 1392 aa10.38□□□□□ -0.75
HLA-DMB-262ENST00000498020 EVC2Q86UK5 1308 aa10.37□□□□□ -0.75
HLA-DMB-262ENST00000498020 PLXNC1O60486 1568 aa10.37□□□□□ -0.75
HLA-DMB-262ENST00000498020 PPP2R1AP30153 589 aa10.37□□□□□ -0.75
HLA-DMB-262ENST00000498020 ESCO1Q5FWF5 840 aa10.37□□□□□ -0.75
HLA-DMB-262ENST00000498020 SLC52A1Q9NWF4 448 aa10.37□□□□□ -0.75
HLA-DMB-262ENST00000498020 ARAP3Q8WWN8 1544 aa10.37□□□□□ -0.75
HLA-DMB-262ENST00000498020 RRP1P56182 461 aaKnown RBP10.37□□□□□ -0.75
HLA-DMB-262ENST00000498020 NUTM2GQ5VZR2 741 aa10.37□□□□□ -0.75
HLA-DMB-262ENST00000498020 NGLY1Q96IV0 654 aa10.37□□□□□ -0.75
HLA-DMB-262ENST00000498020 ATP7AQ04656 1500 aa10.37□□□□□ -0.75
HLA-DMB-262ENST00000498020 NGEFQ8N5V2 710 aa10.36□□□□□ -0.75
HLA-DMB-262ENST00000498020 STRN4Q9NRL3 753 aa10.36□□□□□ -0.75
HLA-DMB-262ENST00000498020 CDC42BPBQ9Y5S2 1711 aa10.36□□□□□ -0.75
HLA-DMB-262ENST00000498020 U2SURPO15042 1029 aaKnown RBP10.36□□□□□ -0.75
HLA-DMB-262ENST00000498020 NEUROD2Q15784 382 aa10.36□□□□□ -0.75
HLA-DMB-262ENST00000498020 UPF2Q9HAU5 1272 aaKnown RBP10.36□□□□□ -0.75
HLA-DMB-262ENST00000498020 ATP10AO60312 1499 aa10.36□□□□□ -0.75
HLA-DMB-262ENST00000498020 PLA2R1Q13018 1463 aa10.36□□□□□ -0.75
HLA-DMB-262ENST00000498020 PPP6R1Q9UPN7 881 aa10.36□□□□□ -0.75
HLA-DMB-262ENST00000498020 KDM5CP41229 1560 aa10.36□□□□□ -0.75
HLA-DMB-262ENST00000498020 ADGRF5Q8IZF2 1346 aa10.35□□□□□ -0.75
HLA-DMB-262ENST00000498020 HSP90AA1P07900 732 aaKnown RBP10.35□□□□□ -0.75
HLA-DMB-262ENST00000498020 LAS1LQ9Y4W2 734 aaKnown RBP10.35□□□□□ -0.75
HLA-DMB-262ENST00000498020 PARD3Q8TEW0 1356 aa10.35□□□□□ -0.75
HLA-DMB-262ENST00000498020 PER1O15534 1290 aaPredicted RBP10.34□□□□□ -0.75
HLA-DMB-262ENST00000498020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.34□□□□□ -0.75
HLA-DMB-262ENST00000498020 ADAMTS8Q9UP79 889 aa10.34□□□□□ -0.75
HLA-DMB-262ENST00000498020 COL17A1Q9UMD9 1497 aaPredicted RBP10.34□□□□□ -0.75
HLA-DMB-262ENST00000498020 CGNL1Q0VF96 1302 aa10.34□□□□□ -0.75
HLA-DMB-262ENST00000498020 TMEM132EQ6IEE7 984 aa10.34□□□□□ -0.75
HLA-DMB-262ENST00000498020 XPCQ01831 940 aaPredicted RBP10.34□□□□□ -0.75
HLA-DMB-262ENST00000498020 HDGFL2Q7Z4V5 671 aaPredicted RBP10.34□□□□□ -0.75
HLA-DMB-262ENST00000498020 TERF2IPQ9NYB0 399 aa10.34□□□□□ -0.75
HLA-DMB-262ENST00000498020 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.34□□□□□ -0.75
HLA-DMB-262ENST00000498020 MINK1Q8N4C8 1332 aaPredicted RBP10.34□□□□□ -0.75
HLA-DMB-262ENST00000498020 UNC13BO14795 1591 aa10.33□□□□□ -0.76
HLA-DMB-262ENST00000498020 GTF2E1P29083 439 aaPredicted RBP10.33□□□□□ -0.76
HLA-DMB-262ENST00000498020 AMPHP49418 695 aa10.33□□□□□ -0.76
HLA-DMB-262ENST00000498020 ANP32BQ92688 251 aaKnown RBP10.33□□□□□ -0.76
HLA-DMB-262ENST00000498020 CCDC146Q8IYE0 955 aa10.32□□□□□ -0.76
HLA-DMB-262ENST00000498020 IQGAP3Q86VI3 1631 aa10.32□□□□□ -0.76
HLA-DMB-262ENST00000498020 ANP32EQ9BTT0 268 aa10.32□□□□□ -0.76
HLA-DMB-262ENST00000498020 TMX4Q9H1E5 349 aaPredicted RBP10.31□□□□□ -0.76
HLA-DMB-262ENST00000498020 PNNQ9H307 717 aaKnown RBP10.31□□□□□ -0.76
HLA-DMB-262ENST00000498020 C14orf93Q9H972 538 aaKnown RBP10.31□□□□□ -0.76
HLA-DMB-262ENST00000498020 MAPK8IP3Q9UPT6 1336 aa10.31□□□□□ -0.76
HLA-DMB-262ENST00000498020 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.31□□□□□ -0.76
HLA-DMB-262ENST00000498020 APAF1O14727 1248 aa10.31□□□□□ -0.76
HLA-DMB-262ENST00000498020 PTPRTO14522 1441 aa10.31□□□□□ -0.76
HLA-DMB-262ENST00000498020 NOS1P29475 1434 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms