RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 PPP1R15AO75807 674 aaPredicted RBP27.92■■■□□ 2.06
ATPAF2-209ENST00000497871 PHF23Q9BUL5 403 aaPredicted RBP27.92■■■□□ 2.06
ATPAF2-209ENST00000497871 PLEKHG1Q9ULL1 1385 aa27.91■■■□□ 2.06
ATPAF2-209ENST00000497871 ITGAEP38570 1179 aa27.91■■■□□ 2.06
ATPAF2-209ENST00000497871 RIMS2Q9UQ26 1411 aa27.91■■■□□ 2.06
ATPAF2-209ENST00000497871 UNC13BO14795 1591 aa27.9■■■□□ 2.06
ATPAF2-209ENST00000497871 XIRP1Q702N8 1843 aaKnown RBP27.9■■■□□ 2.06
ATPAF2-209ENST00000497871 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.9■■■□□ 2.06
ATPAF2-209ENST00000497871 RBM33Q96EV2 1170 aaKnown RBP27.9■■■□□ 2.06
ATPAF2-209ENST00000497871 CHGAP10645 457 aaKnown RBP27.89■■■□□ 2.06
ATPAF2-209ENST00000497871 NUP155O75694 1391 aa27.88■■■□□ 2.05
ATPAF2-209ENST00000497871 PPARGC1BQ86YN6 1023 aaKnown RBP27.88■■■□□ 2.05
ATPAF2-209ENST00000497871 TBX22Q9Y458 520 aa27.88■■■□□ 2.05
ATPAF2-209ENST00000497871 NKTRP30414 1462 aaKnown RBP27.86■■■□□ 2.05
ATPAF2-209ENST00000497871 TMEM131LA2VDJ0 1609 aa27.85■■■□□ 2.05
ATPAF2-209ENST00000497871 GCC2Q8IWJ2 1684 aa27.85■■■□□ 2.05
ATPAF2-209ENST00000497871 NWD1Q149M9 1564 aa27.82■■■□□ 2.04
ATPAF2-209ENST00000497871 MSH6P52701 1360 aa27.82■■■□□ 2.04
ATPAF2-209ENST00000497871 IQGAP3Q86VI3 1631 aa27.81■■■□□ 2.04
ATPAF2-209ENST00000497871 NUTM2DQ5VT03 806 aaPredicted RBP27.8■■■□□ 2.04
ATPAF2-209ENST00000497871 E9PCH4 1651 aa27.8■■■□□ 2.04
ATPAF2-209ENST00000497871 SLAIN2Q9P270 581 aa27.79■■■□□ 2.04
ATPAF2-209ENST00000497871 MYO5BQ9ULV0 1848 aa27.76■■■□□ 2.04
ATPAF2-209ENST00000497871 ADAMTS13Q76LX8 1427 aa27.75■■■□□ 2.03
ATPAF2-209ENST00000497871 NCOA3Q9Y6Q9 1424 aa27.75■■■□□ 2.03
ATPAF2-209ENST00000497871 PIK3R4Q99570 1358 aa27.73■■■□□ 2.03
ATPAF2-209ENST00000497871 RGS17Q9UGC6 210 aaPredicted RBP27.72■■■□□ 2.03
ATPAF2-209ENST00000497871 CHD2O14647 1828 aaKnown RBP27.71■■■□□ 2.03
ATPAF2-209ENST00000497871 ROBO1Q9Y6N7 1651 aa27.69■■■□□ 2.02
ATPAF2-209ENST00000497871 C14orf37Q86TY3 774 aa27.69■■■□□ 2.02
ATPAF2-209ENST00000497871 C19orf44Q9H6X5 657 aa27.67■■■□□ 2.02
ATPAF2-209ENST00000497871 DIP2AQ14689 1571 aa27.66■■■□□ 2.02
ATPAF2-209ENST00000497871 AMOTL2Q9Y2J4 779 aa27.66■■■□□ 2.02
ATPAF2-209ENST00000497871 RRBP1Q9P2E9 1410 aaKnown RBP27.66■■■□□ 2.02
ATPAF2-209ENST00000497871 CADPS2Q86UW7 1296 aa27.65■■■□□ 2.02
ATPAF2-209ENST00000497871 ZNF326Q5BKZ1 582 aaKnown RBP27.64■■■□□ 2.02
ATPAF2-209ENST00000497871 ATF3P18847 181 aa27.62■■■□□ 2.01
ATPAF2-209ENST00000497871 TRPM2O94759 1503 aa27.6■■■□□ 2.01
ATPAF2-209ENST00000497871 JCADQ9P266 1359 aa27.59■■■□□ 2.01
ATPAF2-209ENST00000497871 NAIPQ13075 1403 aa27.58■■■□□ 2.01
ATPAF2-209ENST00000497871 PTPRUQ92729 1446 aa27.58■■■□□ 2.01
ATPAF2-209ENST00000497871 POTEAQ6S8J7 498 aa27.55■■■□□ 2
ATPAF2-209ENST00000497871 SPHKAPQ2M3C7 1700 aa27.55■■■□□ 2
ATPAF2-209ENST00000497871 TRIM52Q96A61 297 aa27.52■■■□□ 2
ATPAF2-209ENST00000497871 PHLPP1O60346 1717 aa27.52■■■□□ 2
ATPAF2-209ENST00000497871 SETBP1Q9Y6X0 1596 aa27.52■■■□□ 2
ATPAF2-209ENST00000497871 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.5■■□□□ 1.99
ATPAF2-209ENST00000497871 METP08581 1390 aa27.5■■□□□ 1.99
ATPAF2-209ENST00000497871 NRXN3Q9Y4C0 1643 aa27.49■■□□□ 1.99
ATPAF2-209ENST00000497871 BRINP3Q76B58 766 aa27.48■■□□□ 1.99
ATPAF2-209ENST00000497871 SPATA31A6Q5VVP1 1343 aa27.47■■□□□ 1.99
ATPAF2-209ENST00000497871 HFM1A2PYH4 1435 aa27.47■■□□□ 1.99
ATPAF2-209ENST00000497871 DCCP43146 1447 aa27.47■■□□□ 1.99
ATPAF2-209ENST00000497871 CLTCL1P53675 1640 aa27.45■■□□□ 1.99
ATPAF2-209ENST00000497871 COL16A1Q07092 1604 aaPredicted RBP27.45■■□□□ 1.99
ATPAF2-209ENST00000497871 VGFO15240 615 aaPredicted RBP27.45■■□□□ 1.98
ATPAF2-209ENST00000497871 SLC4A1APQ9BWU0 796 aaKnown RBP27.45■■□□□ 1.98
ATPAF2-209ENST00000497871 NEXMIFQ5QGS0 1516 aa27.44■■□□□ 1.98
ATPAF2-209ENST00000497871 AHDC1Q5TGY3 1603 aaPredicted RBP27.42■■□□□ 1.98
ATPAF2-209ENST00000497871 XRN1Q8IZH2 1706 aaKnown RBP27.42■■□□□ 1.98
ATPAF2-209ENST00000497871 RPGRIP1LQ68CZ1 1315 aa27.41■■□□□ 1.98
ATPAF2-209ENST00000497871 MEX3CQ5U5Q3 659 aaKnown RBP27.38■■□□□ 1.97
ATPAF2-209ENST00000497871 MST1RQ04912 1400 aa27.38■■□□□ 1.97
ATPAF2-209ENST00000497871 ADGRL3Q9HAR2 1447 aa27.35■■□□□ 1.97
ATPAF2-209ENST00000497871 KIF1BO60333 1816 aa27.35■■□□□ 1.97
ATPAF2-209ENST00000497871 ZNF772Q68DY9 489 aaPredicted RBP27.35■■□□□ 1.97
ATPAF2-209ENST00000497871 LRP6O75581 1613 aa27.34■■□□□ 1.97
ATPAF2-209ENST00000497871 LRRC59Q96AG4 307 aaKnown RBP27.33■■□□□ 1.97
ATPAF2-209ENST00000497871 ASXL1Q8IXJ9 1541 aa27.32■■□□□ 1.96
ATPAF2-209ENST00000497871 SETD5Q9C0A6 1442 aa27.32■■□□□ 1.96
ATPAF2-209ENST00000497871 NUTM2BA6NNL0 878 aaPredicted RBP27.29■■□□□ 1.96
ATPAF2-209ENST00000497871 NUTM2EB1AL46 878 aaPredicted RBP27.29■■□□□ 1.96
ATPAF2-209ENST00000497871 FOXD1Q16676 465 aa27.29■■□□□ 1.96
ATPAF2-209ENST00000497871 NUTM2AQ8IVF1 878 aaPredicted RBP27.29■■□□□ 1.96
ATPAF2-209ENST00000497871 SHPRHQ149N8 1683 aa27.29■■□□□ 1.96
ATPAF2-209ENST00000497871 PTCH1Q13635 1447 aa27.28■■□□□ 1.96
ATPAF2-209ENST00000497871 ROBO2Q9HCK4 1378 aa27.27■■□□□ 1.96
ATPAF2-209ENST00000497871 DDX17Q92841 729 aaKnown RBP27.25■■□□□ 1.95
ATPAF2-209ENST00000497871 MPHOSPH9Q99550 1183 aa27.25■■□□□ 1.95
ATPAF2-209ENST00000497871 C1orf167Q5SNV9 1468 aa27.24■■□□□ 1.95
ATPAF2-209ENST00000497871 PRAG1Q86YV5 1406 aa27.24■■□□□ 1.95
ATPAF2-209ENST00000497871 CCDC144AA2RUR9 1427 aa27.21■■□□□ 1.95
ATPAF2-209ENST00000497871 NHSL1Q5SYE7 1610 aa27.2■■□□□ 1.95
ATPAF2-209ENST00000497871 RXRBP28702 533 aa27.2■■□□□ 1.94
ATPAF2-209ENST00000497871 RGL3Q3MIN7 710 aa27.2■■□□□ 1.94
ATPAF2-209ENST00000497871 NALCNQ8IZF0 1738 aa27.2■■□□□ 1.94
ATPAF2-209ENST00000497871 ORAI2Q96SN7 254 aa27.2■■□□□ 1.94
ATPAF2-209ENST00000497871 SETD1AO15047 1707 aaKnown RBP27.19■■□□□ 1.94
ATPAF2-209ENST00000497871 ADGRF5Q8IZF2 1346 aa27.18■■□□□ 1.94
ATPAF2-209ENST00000497871 PNPLA6Q8IY17 1366 aa27.18■■□□□ 1.94
ATPAF2-209ENST00000497871 ACIN1Q9UKV3 1341 aaKnown RBP27.17■■□□□ 1.94
ATPAF2-209ENST00000497871 AFF2P51816 1311 aa27.16■■□□□ 1.94
ATPAF2-209ENST00000497871 SOS2Q07890 1332 aaPredicted RBP27.16■■□□□ 1.94
ATPAF2-209ENST00000497871 PPLO60437 1756 aa27.15■■□□□ 1.94
ATPAF2-209ENST00000497871 ANKRD30BQ9BXX2 1392 aa27.15■■□□□ 1.94
ATPAF2-209ENST00000497871 SPATA31E1Q6ZUB1 1445 aa27.15■■□□□ 1.94
ATPAF2-209ENST00000497871 C8orf37Q96NL8 207 aa27.13■■□□□ 1.93
ATPAF2-209ENST00000497871 STK26Q9P289 416 aa27.1■■□□□ 1.93
ATPAF2-209ENST00000497871 ESCO1Q5FWF5 840 aa27.09■■□□□ 1.93
ATPAF2-209ENST00000497871 QTRT2Q9H974 415 aaKnown RBP27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms