RNA–Protein interactions for RNA: ENST00000497791.5

UMPS-209, Transcript of uridine monophosphate synthetase, human

TSL 1 (best)

Gene UMPS, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UMPS-209	ENST00000497791	TMEM2	Q9UHN6	1383 aa		21.59	■■□□□ 1.05
UMPS-209	ENST00000497791	ZFYVE9	O95405	1425 aa		21.59	■■□□□ 1.05
UMPS-209	ENST00000497791	RIMS2	Q9UQ26	1411 aa		21.58	■■□□□ 1.04
UMPS-209	ENST00000497791	STRC	Q7RTU9	1775 aa		21.56	■■□□□ 1.04
UMPS-209	ENST00000497791	LTK	P29376	864 aa		21.56	■■□□□ 1.04
UMPS-209	ENST00000497791	SENP3	Q9H4L4	574 aa	Predicted RBP	21.56	■■□□□ 1.04
UMPS-209	ENST00000497791	POLR1A	O95602	1720 aa	Predicted RBP	21.56	■■□□□ 1.04
UMPS-209	ENST00000497791	L3MBTL2	Q969R5	705 aa		21.54	■■□□□ 1.04
UMPS-209	ENST00000497791	NCKAP5L	Q9HCH0	1330 aa		21.53	■■□□□ 1.04
UMPS-209	ENST00000497791	TXNDC2	Q86VQ3	553 aa		21.51	■■□□□ 1.03
UMPS-209	ENST00000497791	SCAF11	Q99590	1463 aa	Known RBP	21.51	■■□□□ 1.03
UMPS-209	ENST00000497791	DCAF11	Q8TEB1	546 aa		21.5	■■□□□ 1.03
UMPS-209	ENST00000497791	KDM2A	Q9Y2K7	1162 aa		21.5	■■□□□ 1.03
UMPS-209	ENST00000497791	ADGRF5	Q8IZF2	1346 aa		21.5	■■□□□ 1.03
UMPS-209	ENST00000497791	TONSL	Q96HA7	1378 aa		21.49	■■□□□ 1.03
UMPS-209	ENST00000497791	RPGRIP1L	Q68CZ1	1315 aa		21.49	■■□□□ 1.03
UMPS-209	ENST00000497791	NRXN3	Q9Y4C0	1643 aa		21.48	■■□□□ 1.03
UMPS-209	ENST00000497791	ANKLE2	Q86XL3	938 aa		21.47	■■□□□ 1.03
UMPS-209	ENST00000497791	IQGAP1	P46940	1657 aa		21.47	■■□□□ 1.03
UMPS-209	ENST00000497791	EID1	Q9Y6B2	187 aa		21.47	■■□□□ 1.03
UMPS-209	ENST00000497791	PPP1R15A	O75807	674 aa	Predicted RBP	21.46	■■□□□ 1.03
UMPS-209	ENST00000497791	MYOM2	P54296	1465 aa		21.46	■■□□□ 1.03
UMPS-209	ENST00000497791	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	21.44	■■□□□ 1.02
UMPS-209	ENST00000497791	NRXN1	Q9ULB1	1477 aa		21.44	■■□□□ 1.02
UMPS-209	ENST00000497791	MED14	O60244	1454 aa		21.43	■■□□□ 1.02
UMPS-209	ENST00000497791	PLEKHG1	Q9ULL1	1385 aa		21.42	■■□□□ 1.02
UMPS-209	ENST00000497791	VGF	O15240	615 aa	Predicted RBP	21.42	■■□□□ 1.02
UMPS-209	ENST00000497791	NPHP4	O75161	1426 aa	Predicted RBP	21.42	■■□□□ 1.02
UMPS-209	ENST00000497791	SETD1A	O15047	1707 aa	Known RBP	21.42	■■□□□ 1.02
UMPS-209	ENST00000497791	PIK3C2G	O75747	1445 aa		21.41	■■□□□ 1.02
UMPS-209	ENST00000497791	SETBP1	Q9Y6X0	1596 aa		21.41	■■□□□ 1.02
UMPS-209	ENST00000497791	PRAG1	Q86YV5	1406 aa		21.41	■■□□□ 1.02
UMPS-209	ENST00000497791	ADAMTS13	Q76LX8	1427 aa		21.4	■■□□□ 1.02
UMPS-209	ENST00000497791	HDGF	P51858	240 aa	Known RBP	21.4	■■□□□ 1.02
UMPS-209	ENST00000497791	NBPF8	Q3BBV2	869 aa		21.4	■■□□□ 1.02
UMPS-209	ENST00000497791	SLC26A8	Q96RN1	970 aa		21.39	■■□□□ 1.01
UMPS-209	ENST00000497791	ALK	Q9UM73	1620 aa		21.38	■■□□□ 1.01
UMPS-209	ENST00000497791	BCAN	Q96GW7	911 aa		21.37	■■□□□ 1.01
UMPS-209	ENST00000497791	CFAP70	Q5T0N1	1121 aa		21.35	■■□□□ 1.01
UMPS-209	ENST00000497791	ASXL1	Q8IXJ9	1541 aa		21.35	■■□□□ 1.01
UMPS-209	ENST00000497791	TRPM1	Q7Z4N2	1603 aa		21.35	■■□□□ 1.01
UMPS-209	ENST00000497791	TIMELESS	Q9UNS1	1208 aa		21.34	■■□□□ 1.01
UMPS-209	ENST00000497791	PHF23	Q9BUL5	403 aa	Predicted RBP	21.33	■■□□□ 1
UMPS-209	ENST00000497791	MET	P08581	1390 aa		21.32	■■□□□ 1
UMPS-209	ENST00000497791	STAC3	Q96MF2	364 aa		21.32	■■□□□ 1
UMPS-209	ENST00000497791	KIAA1210	Q9ULL0	1709 aa		21.31	■■□□□ 1
UMPS-209	ENST00000497791	LAMC1	P11047	1609 aa		21.31	■■□□□ 1
UMPS-209	ENST00000497791	DIP2A	Q14689	1571 aa		21.31	■■□□□ 1
UMPS-209	ENST00000497791	NBPF1	Q3BBV0	1214 aa		21.31	■■□□□ 1
UMPS-209	ENST00000497791	TMEM132E	Q6IEE7	984 aa		21.31	■■□□□ 1
UMPS-209	ENST00000497791	C14orf93	Q9H972	538 aa	Known RBP	21.31	■■□□□ 1
UMPS-209	ENST00000497791	STRCP1	A6NGW2	1772 aa		21.3	■■□□□ 1
UMPS-209	ENST00000497791	CHD2	O14647	1828 aa	Known RBP	21.29	■■□□□ 1
UMPS-209	ENST00000497791	ADGRB1	O14514	1584 aa		21.28	■■□□□ 1
UMPS-209	ENST00000497791	PTPRU	Q92729	1446 aa		21.28	■■□□□ 1
UMPS-209	ENST00000497791	TBX22	Q9Y458	520 aa		21.28	■■□□□ 1
UMPS-209	ENST00000497791	RALGAPB	Q86X10	1494 aa		21.25	■□□□□ 0.99
UMPS-209	ENST00000497791	DMRT2	Q9Y5R5	561 aa		21.24	■□□□□ 0.99
UMPS-209	ENST00000497791	XRN1	Q8IZH2	1706 aa	Known RBP	21.23	■□□□□ 0.99
UMPS-209	ENST00000497791	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	21.23	■□□□□ 0.99
UMPS-209	ENST00000497791	ROCK2	O75116	1388 aa	Known RBP	21.21	■□□□□ 0.99
UMPS-209	ENST00000497791	STK26	Q9P289	416 aa		21.21	■□□□□ 0.99
UMPS-209	ENST00000497791	NWD1	Q149M9	1564 aa		21.2	■□□□□ 0.98
UMPS-209	ENST00000497791	YTHDC2	Q9H6S0	1430 aa	Known RBP	21.2	■□□□□ 0.98
UMPS-209	ENST00000497791	AMOTL2	Q9Y2J4	779 aa		21.18	■□□□□ 0.98
UMPS-209	ENST00000497791	KNDC1	Q76NI1	1749 aa		21.18	■□□□□ 0.98
UMPS-209	ENST00000497791	GPRASP1	Q5JY77	1395 aa		21.18	■□□□□ 0.98
UMPS-209	ENST00000497791	PIK3R4	Q99570	1358 aa		21.18	■□□□□ 0.98
UMPS-209	ENST00000497791	KCNA6	P17658	529 aa		21.18	■□□□□ 0.98
UMPS-209	ENST00000497791	LRPPRC	P42704	1394 aa	Known RBP	21.18	■□□□□ 0.98
UMPS-209	ENST00000497791	ARHGEF28	Q8N1W1	1705 aa	Known RBP	21.17	■□□□□ 0.98
UMPS-209	ENST00000497791	TRAK1	Q9UPV9	953 aa		21.16	■□□□□ 0.98
UMPS-209	ENST00000497791	ROBO2	Q9HCK4	1378 aa		21.15	■□□□□ 0.98
UMPS-209	ENST00000497791	RBM33	Q96EV2	1170 aa	Known RBP	21.15	■□□□□ 0.98
UMPS-209	ENST00000497791	CARD11	Q9BXL7	1154 aa		21.15	■□□□□ 0.98
UMPS-209	ENST00000497791	XIRP1	Q702N8	1843 aa	Known RBP	21.14	■□□□□ 0.98
UMPS-209	ENST00000497791	LTBP4	Q8N2S1	1624 aa		21.14	■□□□□ 0.97
UMPS-209	ENST00000497791	CPS1	P31327	1500 aa		21.14	■□□□□ 0.97
UMPS-209	ENST00000497791	ABCC11	Q96J66	1382 aa		21.13	■□□□□ 0.97
UMPS-209	ENST00000497791	PLEKHH1	Q9ULM0	1364 aa		21.13	■□□□□ 0.97
UMPS-209	ENST00000497791	TECPR2	O15040	1411 aa		21.12	■□□□□ 0.97
UMPS-209	ENST00000497791	ZEB1	P37275	1124 aa	Predicted RBP	21.12	■□□□□ 0.97
UMPS-209	ENST00000497791	WAPL	Q7Z5K2	1190 aa		21.11	■□□□□ 0.97
UMPS-209	ENST00000497791	PTCH1	Q13635	1447 aa		21.1	■□□□□ 0.97
UMPS-209	ENST00000497791	DLC1	Q96QB1	1528 aa		21.1	■□□□□ 0.97
UMPS-209	ENST00000497791	NKTR	P30414	1462 aa	Known RBP	21.09	■□□□□ 0.97
UMPS-209	ENST00000497791	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	21.08	■□□□□ 0.97
UMPS-209	ENST00000497791	LRRC7	Q96NW7	1537 aa		21.08	■□□□□ 0.96
UMPS-209	ENST00000497791	SAFB2	Q14151	953 aa	Known RBP eCLIP	21.08	■□□□□ 0.96
UMPS-209	ENST00000497791	PRAM1	Q96QH2	718 aa		21.07	■□□□□ 0.96
UMPS-209	ENST00000497791	QRICH2	Q9H0J4	1663 aa		21.06	■□□□□ 0.96
UMPS-209	ENST00000497791	NALCN	Q8IZF0	1738 aa		21.06	■□□□□ 0.96
UMPS-209	ENST00000497791	USP47	Q96K76	1375 aa		21.06	■□□□□ 0.96
UMPS-209	ENST00000497791	PROSER2	Q86WR7	435 aa	Predicted RBP	21.05	■□□□□ 0.96
UMPS-209	ENST00000497791	FAM135B	Q49AJ0	1406 aa		21.05	■□□□□ 0.96
UMPS-209	ENST00000497791	TMEM94	Q12767	1356 aa		21.04	■□□□□ 0.96
UMPS-209	ENST00000497791	HIRIP3	Q9BW71	556 aa	Predicted RBP	21.02	■□□□□ 0.95
UMPS-209	ENST00000497791	POGK	Q9P215	609 aa		21.02	■□□□□ 0.95
UMPS-209	ENST00000497791	ST20-MTHFS	A0A0A6YYL1	179 aa		21.01	■□□□□ 0.95
UMPS-209	ENST00000497791	SIRT1	Q96EB6	747 aa		21.01	■□□□□ 0.95

Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms