RNA–Protein interactions for RNA: ENST00000497567.1

ATP13A3-210, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 532 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-210ENST00000497567 BCAMP50895 628 aa13.53□□□□□ -0.24
ATP13A3-210ENST00000497567 TTLL12Q14166 644 aaPredicted RBP13.53□□□□□ -0.24
ATP13A3-210ENST00000497567 KCTD12Q96CX2 325 aaKnown RBP13.53□□□□□ -0.24
ATP13A3-210ENST00000497567 DAXXQ9UER7 740 aaPredicted RBP13.53□□□□□ -0.24
ATP13A3-210ENST00000497567 ANKK1Q8NFD2 765 aa13.52□□□□□ -0.25
ATP13A3-210ENST00000497567 GPBP1L1Q9HC44 474 aaPredicted RBP13.52□□□□□ -0.25
ATP13A3-210ENST00000497567 CLCN1P35523 988 aa13.51□□□□□ -0.25
ATP13A3-210ENST00000497567 GPCPD1Q9NPB8 672 aa13.51□□□□□ -0.25
ATP13A3-210ENST00000497567 LRCH3Q96II8 777 aa13.5□□□□□ -0.25
ATP13A3-210ENST00000497567 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.5□□□□□ -0.25
ATP13A3-210ENST00000497567 SOWAHBA6NEL2 793 aa13.49□□□□□ -0.25
ATP13A3-210ENST00000497567 HDGFP51858 240 aaKnown RBP13.49□□□□□ -0.25
ATP13A3-210ENST00000497567 BRPF1P55201 1214 aaPredicted RBP13.49□□□□□ -0.25
ATP13A3-210ENST00000497567 GIGYF2Q6Y7W6 1299 aaKnown RBP13.49□□□□□ -0.25
ATP13A3-210ENST00000497567 RNF40O75150 1001 aa13.47□□□□□ -0.25
ATP13A3-210ENST00000497567 NEUROD2Q15784 382 aa13.47□□□□□ -0.25
ATP13A3-210ENST00000497567 THSD4Q6ZMP0 1018 aa13.47□□□□□ -0.25
ATP13A3-210ENST00000497567 FAM217BQ9NTX9 383 aaPredicted RBP13.47□□□□□ -0.25
ATP13A3-210ENST00000497567 DDX11L8A8MPP1 907 aa13.46□□□□□ -0.25
ATP13A3-210ENST00000497567 SLC10A3P09131 477 aa13.45□□□□□ -0.26
ATP13A3-210ENST00000497567 MS4A1P11836 297 aa13.44□□□□□ -0.26
ATP13A3-210ENST00000497567 SSTR3P32745 418 aaPredicted RBP13.44□□□□□ -0.26
ATP13A3-210ENST00000497567 MMRN1Q13201 1228 aa13.44□□□□□ -0.26
ATP13A3-210ENST00000497567 SLF2Q8IX21 1173 aa13.44□□□□□ -0.26
ATP13A3-210ENST00000497567 RNF166Q96A37 237 aaPredicted RBP13.44□□□□□ -0.26
ATP13A3-210ENST00000497567 KDM4CQ9H3R0 1056 aa13.44□□□□□ -0.26
ATP13A3-210ENST00000497567 HPS5Q9UPZ3 1129 aa13.44□□□□□ -0.26
ATP13A3-210ENST00000497567 CD46P15529 392 aa13.4□□□□□ -0.26
ATP13A3-210ENST00000497567 PTPN5P54829 565 aa13.4□□□□□ -0.26
ATP13A3-210ENST00000497567 SULF1Q8IWU6 871 aa13.4□□□□□ -0.26
ATP13A3-210ENST00000497567 RDH13Q8NBN7 331 aa13.4□□□□□ -0.26
ATP13A3-210ENST00000497567 WBP1LQ9NX94 342 aa13.4□□□□□ -0.26
ATP13A3-210ENST00000497567 TSR3Q9UJK0 312 aaKnown RBP13.4□□□□□ -0.26
ATP13A3-210ENST00000497567 PPP4CP60510 307 aa13.39□□□□□ -0.27
ATP13A3-210ENST00000497567 SLC4A3P48751 1232 aa13.38□□□□□ -0.27
ATP13A3-210ENST00000497567 CFHP08603 1231 aa13.35□□□□□ -0.27
ATP13A3-210ENST00000497567 FAM117AQ9C073 453 aa13.35□□□□□ -0.27
ATP13A3-210ENST00000497567 BEGAINQ9BUH8 593 aa13.34□□□□□ -0.27
ATP13A3-210ENST00000497567 GCGRP47871 477 aa13.33□□□□□ -0.28
ATP13A3-210ENST00000497567 APLP1P51693 650 aa13.33□□□□□ -0.28
ATP13A3-210ENST00000497567 RSPH4AQ5TD94 716 aa13.32□□□□□ -0.28
ATP13A3-210ENST00000497567 PLEKHG3A1L390 1219 aa13.29□□□□□ -0.28
ATP13A3-210ENST00000497567 NECTIN2Q92692 538 aa13.29□□□□□ -0.28
ATP13A3-210ENST00000497567 HCSTQ9UBK5 93 aa13.28□□□□□ -0.28
ATP13A3-210ENST00000497567 KMT5BQ4FZB7 885 aa13.27□□□□□ -0.29
ATP13A3-210ENST00000497567 IL27Q8NEV9 243 aa13.27□□□□□ -0.29
ATP13A3-210ENST00000497567 ACTN4O43707 911 aaKnown RBP13.26□□□□□ -0.29
ATP13A3-210ENST00000497567 FUT2Q10981 343 aa13.26□□□□□ -0.29
ATP13A3-210ENST00000497567 SPIRE2Q8WWL2 714 aa13.26□□□□□ -0.29
ATP13A3-210ENST00000497567 KDM4AO75164 1064 aa13.25□□□□□ -0.29
ATP13A3-210ENST00000497567 DDRGK1Q96HY6 314 aa13.24□□□□□ -0.29
ATP13A3-210ENST00000497567 NUTM1Q86Y26 1132 aa13.23□□□□□ -0.29
ATP13A3-210ENST00000497567 TBC1D2Q9BYX2 928 aa13.23□□□□□ -0.29
ATP13A3-210ENST00000497567 PUS10Q3MIT2 529 aaKnown RBP13.22□□□□□ -0.29
ATP13A3-210ENST00000497567 NYAP1Q6ZVC0 841 aa13.22□□□□□ -0.29
ATP13A3-210ENST00000497567 HLA-CQ95604 372 aa13.22□□□□□ -0.29
ATP13A3-210ENST00000497567 PRR14Q9BWN1 585 aa13.21□□□□□ -0.29
ATP13A3-210ENST00000497567 PLSCR2Q9NRY7 297 aa13.21□□□□□ -0.29
ATP13A3-210ENST00000497567 PCDHB3Q9Y5E6 796 aa13.2□□□□□ -0.3
ATP13A3-210ENST00000497567 MOXD2PA6NHM9 499 aa13.19□□□□□ -0.3
ATP13A3-210ENST00000497567 HOXA2O43364 376 aa13.19□□□□□ -0.3
ATP13A3-210ENST00000497567 NDUFV2P19404 249 aa13.18□□□□□ -0.3
ATP13A3-210ENST00000497567 ATP6V1AP38606 617 aa13.18□□□□□ -0.3
ATP13A3-210ENST00000497567 GUCA2AQ02747 115 aa13.18□□□□□ -0.3
ATP13A3-210ENST00000497567 MYSM1Q5VVJ2 828 aa13.18□□□□□ -0.3
ATP13A3-210ENST00000497567 BLOC1S3Q6QNY0 202 aa13.18□□□□□ -0.3
ATP13A3-210ENST00000497567 COPS2P61201 443 aa13.17□□□□□ -0.3
ATP13A3-210ENST00000497567 USP46P62068 366 aa13.17□□□□□ -0.3
ATP13A3-210ENST00000497567 MORN1Q5T089 497 aa13.17□□□□□ -0.3
ATP13A3-210ENST00000497567 MTRQ99707 1265 aa13.16□□□□□ -0.3
ATP13A3-210ENST00000497567 TJAP1Q5JTD0 557 aa13.14□□□□□ -0.31
ATP13A3-210ENST00000497567 DIXDC1Q155Q3 683 aa13.13□□□□□ -0.31
ATP13A3-210ENST00000497567 POLR3EQ9NVU0 708 aa13.13□□□□□ -0.31
ATP13A3-210ENST00000497567 SLC27A5Q9Y2P5 690 aa13.13□□□□□ -0.31
ATP13A3-210ENST00000497567 GRIPAP1Q4V328 841 aa13.12□□□□□ -0.31
ATP13A3-210ENST00000497567 ZNF516Q92618 1163 aa13.12□□□□□ -0.31
ATP13A3-210ENST00000497567 RSPH6AQ9H0K4 717 aa13.12□□□□□ -0.31
ATP13A3-210ENST00000497567 LIMD1Q9UGP4 676 aa13.12□□□□□ -0.31
ATP13A3-210ENST00000497567 PCDHGC3Q9UN70 934 aa13.12□□□□□ -0.31
ATP13A3-210ENST00000497567 SPTLC1O15269 473 aa13.11□□□□□ -0.31
ATP13A3-210ENST00000497567 FDX1P10109 184 aa13.11□□□□□ -0.31
ATP13A3-210ENST00000497567 SH3D19Q5HYK7 790 aa13.11□□□□□ -0.31
ATP13A3-210ENST00000497567 RSBN1LQ6PCB5 846 aaPredicted RBP13.11□□□□□ -0.31
ATP13A3-210ENST00000497567 RIC3Q7Z5B4 369 aa13.11□□□□□ -0.31
ATP13A3-210ENST00000497567 SCUBE3Q8IX30 993 aa13.11□□□□□ -0.31
ATP13A3-210ENST00000497567 SKIV2LQ15477 1246 aaKnown RBP13.09□□□□□ -0.31
ATP13A3-210ENST00000497567 PROCA1Q8NCQ7 364 aaPredicted RBP13.09□□□□□ -0.31
ATP13A3-210ENST00000497567 IL21Q9HBE4 155 aa13.09□□□□□ -0.31
ATP13A3-210ENST00000497567 PCDHB15Q9Y5E8 787 aa13.09□□□□□ -0.31
ATP13A3-210ENST00000497567 NR1I2O75469 434 aa13.08□□□□□ -0.32
ATP13A3-210ENST00000497567 CLK2P49760 499 aaKnown RBP13.08□□□□□ -0.32
ATP13A3-210ENST00000497567 TLL1O43897 1013 aa13.06□□□□□ -0.32
ATP13A3-210ENST00000497567 ZPR1O75312 459 aa13.06□□□□□ -0.32
ATP13A3-210ENST00000497567 ITGBL1O95965 494 aaPredicted RBP13.06□□□□□ -0.32
ATP13A3-210ENST00000497567 CSPP1Q1MSJ5 1256 aa13.06□□□□□ -0.32
ATP13A3-210ENST00000497567 RNF19BQ6ZMZ0 732 aa13.06□□□□□ -0.32
ATP13A3-210ENST00000497567 SYMPKQ92797 1274 aaKnown RBP13.06□□□□□ -0.32
ATP13A3-210ENST00000497567 NKX2-3Q8TAU0 364 aa13.05□□□□□ -0.32
ATP13A3-210ENST00000497567 THAP11Q96EK4 314 aa13.05□□□□□ -0.32
ATP13A3-210ENST00000497567 GJA5P36382 358 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms